BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018014
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...   144   6e-33
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   142   2e-32
ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   142   2e-32
ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32

>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/91 (74%), Positives = 81/91 (89%)
 Frame = -3

Query: 274 QLHEAKAFIEAVPIDHGLCLWRILLGACRNYRSCDIGAYAGEKLLALGSPESSAYVLLSS 95
           +L+EAK FIE+  IDHGLCLWRILLGACRNYR+ ++GAYAGEKL+ LGS ESSAYVLLS 
Sbjct: 566 KLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSG 625

Query: 94  IYSSMGRWEDVQRVRSIMKRKRVSKEPGCSW 2
           IY+++GR EDV+RVRS+MK + VSKEPGCSW
Sbjct: 626 IYTALGRPEDVERVRSMMKVRGVSKEPGCSW 656


>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
           protein product [Vitis vinifera]
          Length = 703

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = -3

Query: 274 QLHEAKAFIEAVPIDHGLCLWRILLGACRNYRSCDIGAYAGEKLLALGSPESSAYVLLSS 95
           +L EA  F E+  IDHG+CLWRI+LGACRNYR+ ++GAYAGEKL+ LGS ESSAYVLLSS
Sbjct: 563 KLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSS 622

Query: 94  IYSSMGRWEDVQRVRSIMKRKRVSKEPGCSW 2
           IYS++GRWEDV+RVR +MK + VSKEPGCSW
Sbjct: 623 IYSALGRWEDVERVRRMMKLRGVSKEPGCSW 653


>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/91 (70%), Positives = 80/91 (87%)
 Frame = -3

Query: 274 QLHEAKAFIEAVPIDHGLCLWRILLGACRNYRSCDIGAYAGEKLLALGSPESSAYVLLSS 95
           +LHE K FIE+  IDHG+CLWRILLGACRNYR+ ++GAYAGEKL+ LGS ESSAY+LLSS
Sbjct: 568 KLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSS 627

Query: 94  IYSSMGRWEDVQRVRSIMKRKRVSKEPGCSW 2
           IY+++GR +DV+RVR +MK + V+KEPGCSW
Sbjct: 628 IYTALGRSDDVERVRRLMKLRGVNKEPGCSW 658


>ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/91 (70%), Positives = 80/91 (87%)
 Frame = -3

Query: 274 QLHEAKAFIEAVPIDHGLCLWRILLGACRNYRSCDIGAYAGEKLLALGSPESSAYVLLSS 95
           +LHE K FIE+  IDHG+CLWRILLGACRNYR+ ++GAYAGEKL+ LGS ESSAY+LLSS
Sbjct: 550 KLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSS 609

Query: 94  IYSSMGRWEDVQRVRSIMKRKRVSKEPGCSW 2
           IY+++GR +DV+RVR +MK + V+KEPGCSW
Sbjct: 610 IYTALGRSDDVERVRRLMKLRGVNKEPGCSW 640


>ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  142 bits (357), Expect = 4e-32
 Identities = 64/91 (70%), Positives = 79/91 (86%)
 Frame = -3

Query: 274 QLHEAKAFIEAVPIDHGLCLWRILLGACRNYRSCDIGAYAGEKLLALGSPESSAYVLLSS 95
           +LHEAK FIE+  +DHGLCLWRILL A +N+R  D+GAYAGEKL+ LGS ESSAYVLLSS
Sbjct: 573 KLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSS 632

Query: 94  IYSSMGRWEDVQRVRSIMKRKRVSKEPGCSW 2
           IY+++G+WEDV+RVR +MK + V+KEPGCSW
Sbjct: 633 IYTALGKWEDVERVRGMMKARGVTKEPGCSW 663