BLASTX nr result

ID: Coptis23_contig00018006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018006
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536762.1| PREDICTED: coiled-coil domain-containing pro...    99   2e-18
ref|XP_002311890.1| predicted protein [Populus trichocarpa] gi|2...    93   1e-16
ref|XP_002513141.1| nucleic acid binding protein, putative [Rici...    91   4e-16
ref|XP_002464440.1| hypothetical protein SORBIDRAFT_01g018460 [S...    91   5e-16
ref|XP_004147099.1| PREDICTED: G patch domain and ankyrin repeat...    90   6e-16

>ref|XP_003536762.1| PREDICTED: coiled-coil domain-containing protein 75-like [Glycine
           max]
          Length = 123

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 52/107 (48%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = +1

Query: 397 GFQLLKKAGWTEGTGLGVSEQGRLEPLQTHVKNNKRGLGAEKTKKKTSHLS-KESESKVQ 573
           GFQLLKK GW EGTGLGVSEQGRLEP++THVKNNKRGLGA+K KKK       +S+S   
Sbjct: 17  GFQLLKKHGWKEGTGLGVSEQGRLEPVETHVKNNKRGLGADKAKKKVVKAKPDQSDSSKG 76

Query: 574 NDNEDXXXXXXXXXXXXXXXXIQEQEKRLXXXXXXXXXXXXXWPDNV 714
           N+ +D                +QE EK++             WP+NV
Sbjct: 77  NNQQDHLPQKKSKTLSKRMRKMQEFEKKMREKEFERAFFREFWPENV 123


>ref|XP_002311890.1| predicted protein [Populus trichocarpa] gi|222851710|gb|EEE89257.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 52/116 (44%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
 Frame = +1

Query: 397 GFQLLKKAGWTEGTGLGVSEQGRLEPLQTHVKNNKRGLGAEKTKK----------KTSHL 546
           GFQLLKK GW EGTGLG+SEQGRLEP+QT++KNNKRGLGA+  KK           +S  
Sbjct: 18  GFQLLKKHGWKEGTGLGISEQGRLEPVQTYLKNNKRGLGADHNKKLLVKKNNTTESSSAP 77

Query: 547 SKESESKVQNDNEDXXXXXXXXXXXXXXXXIQEQEKRLXXXXXXXXXXXXXWPDNV 714
           +  S S     N+D                +QE EKRL             WPDNV
Sbjct: 78  ASSSSSSKDKTNQDRSSSRKSKALSKKQRKMQELEKRLQDKEFERGFFREFWPDNV 133


>ref|XP_002513141.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223548152|gb|EEF49644.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 118

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 53/108 (49%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
 Frame = +1

Query: 397 GFQLLKKAGWTEGTGLGVSEQGRLEPLQTHVKNNKRGLGAEKTK--KKTSHLSKESESKV 570
           GFQLLKK GW EGTGLG+SEQGRLEP+QT+VKNNKRGLGA+K K  K +SH  K  E   
Sbjct: 22  GFQLLKKHGWKEGTGLGISEQGRLEPVQTYVKNNKRGLGAQKLKKTKTSSHGHKVLEHST 81

Query: 571 QNDNEDXXXXXXXXXXXXXXXXIQEQEKRLXXXXXXXXXXXXXWPDNV 714
           ++                    +QE EKRL             WPDNV
Sbjct: 82  KS-----------KPVSKKQRKMQELEKRLQEKEFERAFYRDFWPDNV 118


>ref|XP_002464440.1| hypothetical protein SORBIDRAFT_01g018460 [Sorghum bicolor]
           gi|241918294|gb|EER91438.1| hypothetical protein
           SORBIDRAFT_01g018460 [Sorghum bicolor]
          Length = 114

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 47/106 (44%), Positives = 60/106 (56%)
 Frame = +1

Query: 397 GFQLLKKAGWTEGTGLGVSEQGRLEPLQTHVKNNKRGLGAEKTKKKTSHLSKESESKVQN 576
           GFQLLKK+GW EGTGLG  EQGRLEP++T VKNNKRGLG+++ K K   +  + E+  Q 
Sbjct: 10  GFQLLKKSGWKEGTGLGAQEQGRLEPVETRVKNNKRGLGSKEPKPKPK-VEDDVETNPQK 68

Query: 577 DNEDXXXXXXXXXXXXXXXXIQEQEKRLXXXXXXXXXXXXXWPDNV 714
             ++                +QE+EKRL             WPDNV
Sbjct: 69  PKQEVPSKKRAKLAAKRIRKMQEEEKRLKEKEFEMAFFREFWPDNV 114


>ref|XP_004147099.1| PREDICTED: G patch domain and ankyrin repeat-containing protein 1
           homolog [Cucumis sativus]
          Length = 126

 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 48/106 (45%), Positives = 60/106 (56%)
 Frame = +1

Query: 397 GFQLLKKAGWTEGTGLGVSEQGRLEPLQTHVKNNKRGLGAEKTKKKTSHLSKESESKVQN 576
           GF+LLKK GW EGTGLGVSEQGRLEP+Q  VKNNKRGLGA+K KKK    +  + S  +N
Sbjct: 22  GFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLGADKVKKKIKETTDNATSDRKN 81

Query: 577 DNEDXXXXXXXXXXXXXXXXIQEQEKRLXXXXXXXXXXXXXWPDNV 714
            N++                +QE+E+               WP+NV
Sbjct: 82  -NQERPPPKKAKGLTKRMRKMQEEERLFQEKEFEQAFFREFWPENV 126


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