BLASTX nr result

ID: Coptis23_contig00017995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017995
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40584.3| unnamed protein product [Vitis vinifera]              450   e-124
ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose py...   447   e-123
ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional...   439   e-121
ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arab...   433   e-119
ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose py...   429   e-118

>emb|CBI40584.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  450 bits (1157), Expect = e-124
 Identities = 226/322 (70%), Positives = 266/322 (82%), Gaps = 12/322 (3%)
 Frame = +2

Query: 2   RKGEKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGR 181
           R   K+D++  LRKSWY LRLSVR P+RVPTWDAI+LTAASPEQA+LYEWQL RAKR+GR
Sbjct: 5   RSRAKVDLTGILRKSWYRLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLKRAKRLGR 64

Query: 182 IATSTITLAVPDPHGARIGSGAATLNALLALSRFFQ--NQQVENY----------RXXXX 325
           IA+ST+TL VPDP G RIGSG ATLNA+ AL+R  +    QVEN                
Sbjct: 65  IASSTVTLVVPDPDGNRIGSGGATLNAIYALARHLEALGPQVENMDTGSSESSVPHERSN 124

Query: 326 XXXXXXXVITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDH 505
                  +++F+  +HILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDH
Sbjct: 125 SEVSFSPMVSFMAKRHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDH 184

Query: 506 ILAISSCARQAFKNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIV 685
           ILAIS CARQAFKN+GG+FIMTGDVLPCFDASTMVLPED+SCIITVP+TLD+ASNHGVIV
Sbjct: 185 ILAISCCARQAFKNEGGIFIMTGDVLPCFDASTMVLPEDTSCIITVPLTLDIASNHGVIV 244

Query: 686 ASNTGTVDKTYSLSLVQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLIL 865
           AS TG ++KT  +SLV+NLLQKP+++EL+  QAIL DGRTLLDTGIIAV+GKAWV+L+ L
Sbjct: 245 ASKTGILNKTSYVSLVENLLQKPTMEELVKNQAILDDGRTLLDTGIIAVRGKAWVELVRL 304

Query: 866 ANSSETMISELIEHKEEISLYE 931
           A SS+ MI++L++ K+E+SLYE
Sbjct: 305 ACSSQPMIADLLKSKKEMSLYE 326


>ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
           [Vitis vinifera]
          Length = 1079

 Score =  447 bits (1149), Expect = e-123
 Identities = 224/320 (70%), Positives = 265/320 (82%), Gaps = 10/320 (3%)
 Frame = +2

Query: 2   RKGEKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGR 181
           R   K+D++  LRKSWY LRLSVR P+RVPTWDAI+LTAASPEQA+LYEWQL RAKR+GR
Sbjct: 5   RSRAKVDLTGILRKSWYRLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLKRAKRLGR 64

Query: 182 IATSTITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENY----------RXXXXXX 331
           IA+ST+TL VPDP G RIGSG ATLNA+ AL+R  +   +EN                  
Sbjct: 65  IASSTVTLVVPDPDGNRIGSGGATLNAIYALARHLE--ALENMDTGSSESSVPHERSNSE 122

Query: 332 XXXXXVITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL 511
                +++F+  +HILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL
Sbjct: 123 VSFSPMVSFMAKRHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL 182

Query: 512 AISSCARQAFKNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVAS 691
           AIS CARQAFKN+GG+FIMTGDVLPCFDASTMVLPED+SCIITVP+TLD+ASNHGVIVAS
Sbjct: 183 AISCCARQAFKNEGGIFIMTGDVLPCFDASTMVLPEDTSCIITVPLTLDIASNHGVIVAS 242

Query: 692 NTGTVDKTYSLSLVQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILAN 871
            TG ++KT  +SLV+NLLQKP+++EL+  QAIL DGRTLLDTGIIAV+GKAWV+L+ LA 
Sbjct: 243 KTGILNKTSYVSLVENLLQKPTMEELVKNQAILDDGRTLLDTGIIAVRGKAWVELVRLAC 302

Query: 872 SSETMISELIEHKEEISLYE 931
           SS+ MI++L++ K+E+SLYE
Sbjct: 303 SSQPMIADLLKSKKEMSLYE 322


>ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional fucokinase/fucose
           pyrophosphorylase-like [Cucumis sativus]
           gi|449478213|ref|XP_004155252.1| PREDICTED: LOW QUALITY
           PROTEIN: bifunctional fucokinase/fucose
           pyrophosphorylase-like [Cucumis sativus]
          Length = 1065

 Score =  439 bits (1128), Expect = e-121
 Identities = 222/315 (70%), Positives = 255/315 (80%), Gaps = 8/315 (2%)
 Frame = +2

Query: 11  EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 190
           +K D+   LRKSWYHLRLSVR P+RVPTWDAI+LTAASPEQAQLYEWQLNRAKR+GRIA 
Sbjct: 11  KKADLHSILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAQLYEWQLNRAKRIGRIAH 70

Query: 191 STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENY--------RXXXXXXXXXXX 346
           STITLAVPDP G RIGSGAATLNA+ AL++ + N  + +         R           
Sbjct: 71  STITLAVPDPDGQRIGSGAATLNAIYALAKHYHNLGLVHSTEVSFISARSKPRFXASALL 130

Query: 347 VITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSC 526
            + F + KHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI+SC
Sbjct: 131 WLCFTSKKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASC 190

Query: 527 ARQAFKNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGTV 706
           ARQAFKN+GG+  MTGDVLPCFDAS ++LPE+ SCIITVPITLD+ASNHGVIVAS   T 
Sbjct: 191 ARQAFKNEGGILTMTGDVLPCFDASALILPEEDSCIITVPITLDIASNHGVIVASKNETA 250

Query: 707 DKTYSLSLVQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILANSSETM 886
            + Y+LSLV NLLQKPSV+EL    A+L DGRTLLDTGIIAV+GK W +L++LA S + M
Sbjct: 251 GRGYTLSLVDNLLQKPSVEELTKNDAVLSDGRTLLDTGIIAVRGKGWAELVLLACSCQPM 310

Query: 887 ISELIEHKEEISLYE 931
           IS+L++  +EISLYE
Sbjct: 311 ISDLLKCGKEISLYE 325


>ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arabidopsis lyrata subsp.
           lyrata] gi|297337924|gb|EFH68341.1| hypothetical protein
           ARALYDRAFT_470155 [Arabidopsis lyrata subsp. lyrata]
          Length = 1055

 Score =  433 bits (1114), Expect = e-119
 Identities = 214/310 (69%), Positives = 258/310 (83%)
 Frame = +2

Query: 2   RKGEKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGR 181
           ++ +K D++  LRKSWYHLRLSVR P RVPTWDAI+LTAASPEQA+LYEWQL RAKRMGR
Sbjct: 3   KQRKKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGR 62

Query: 182 IATSTITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXXVITFL 361
           IA+ST+TLAVPDP G RIGSGAATLNA+ AL+R ++    +              V  FL
Sbjct: 63  IASSTVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFDPGPEVEVANGTCKWV-RFL 121

Query: 362 TNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAF 541
           + KH+L+LHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI+SCARQAF
Sbjct: 122 SAKHVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASCARQAF 181

Query: 542 KNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGTVDKTYS 721
           +++GG+FIMTGDVLPCFDA  M LPED++ I+TVPITLD+ASNHGVIV S + ++ ++Y+
Sbjct: 182 RDQGGLFIMTGDVLPCFDAFRMTLPEDAASIVTVPITLDIASNHGVIVTSKSESLAESYT 241

Query: 722 LSLVQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILANSSETMISELI 901
           +SLV +LLQKP+V+EL+ K AILHDGRTLLDTGII+ KG+AW+DL+ L  S + MI ELI
Sbjct: 242 VSLVNDLLQKPTVEELVKKDAILHDGRTLLDTGIISAKGRAWLDLVALGCSCQPMILELI 301

Query: 902 EHKEEISLYE 931
             K+E+SLYE
Sbjct: 302 SSKKEMSLYE 311


>ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
           [Glycine max]
          Length = 1049

 Score =  429 bits (1103), Expect = e-118
 Identities = 218/310 (70%), Positives = 250/310 (80%)
 Frame = +2

Query: 2   RKGEKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGR 181
           R  +K D++  LRKSWYHLRLSVRDP RVPTWDAI+LTAASPEQAQLY WQL RAKRMGR
Sbjct: 9   RVKQKEDLASLLRKSWYHLRLSVRDPCRVPTWDAIVLTAASPEQAQLYNWQLERAKRMGR 68

Query: 182 IATSTITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXXVITFL 361
           I+ ST+TLAVPDP G RIGSGAATLNA+ AL+R                       +  L
Sbjct: 69  ISASTVTLAVPDPLGQRIGSGAATLNAIHALARCINTN------------------VFLL 110

Query: 362 TNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAF 541
             KHILLLHAGGDSKRVPWANPMGKVFLPLPYLA+DDPDGPVPLLFDHILAI+SCARQAF
Sbjct: 111 AKKHILLLHAGGDSKRVPWANPMGKVFLPLPYLASDDPDGPVPLLFDHILAIASCARQAF 170

Query: 542 KNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGTVDKTYS 721
            N+GG+  MTGDVLPCFDAS M LP D+SCIITVPITLDVA+NHGVIVA+ T    ++Y+
Sbjct: 171 GNQGGMLTMTGDVLPCFDASLMTLPVDTSCIITVPITLDVAANHGVIVAAETEHSTQSYA 230

Query: 722 LSLVQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILANSSETMISELI 901
           +SLV NLLQKPSV EL+  +A+L DGRTLLDTGIIAV+GKAW++L+ LA S + MISEL+
Sbjct: 231 VSLVDNLLQKPSVDELVKSKAVLADGRTLLDTGIIAVRGKAWLELVTLACSCQQMISELL 290

Query: 902 EHKEEISLYE 931
           + K+E+SLYE
Sbjct: 291 QSKKEMSLYE 300


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