BLASTX nr result
ID: Coptis23_contig00017987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00017987
(2731 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15033.3| unnamed protein product [Vitis vinifera] 674 0.0
ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A... 666 0.0
ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ric... 569 0.0
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara... 505 e-177
sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kin... 505 e-177
>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
Length = 3085
Score = 674 bits (1740), Expect(2) = 0.0
Identities = 370/765 (48%), Positives = 490/765 (64%), Gaps = 22/765 (2%)
Frame = +3
Query: 492 SCDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXXXXXX 671
S E SS LLP LG E S NE +GW T+WS L+H LPIFSN+T
Sbjct: 445 SLQEFSSELLLPVLGAEMLMRPSFTSNEFDNGWHTIWSCLMHGLPIFSNITSVVDAALVL 504
Query: 672 XXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLSCYFTRKGSQGDLREILYXXXXX 851
NI+S +L++ PIVPQ+IW+LRLF HMPSVS LYF+SCYF+RKGSQGDLR+IL+
Sbjct: 505 LGNIVSNDLISTPIVPQEIWDLRLFKHMPSVSVLYFISCYFSRKGSQGDLRDILHLRQNL 564
Query: 852 XXXXXXXXXXXESFLLSDSVIILLPAAIFSLSVGCAPFPYFIKNLSIANSCFDFSEVVED 1031
+SF+L++ +++LLPA +++L GC PF K L I++S + +ED
Sbjct: 565 LRAVLGLLEW-KSFILNERMVVLLPATVYALCTGCVPFTDCYKGLLISHSFLGVPDRIED 623
Query: 1032 GIMAKGNQRFR-YKLLECSVELLAEIEEGSDVKAMQSESQHIVRLPCRISDPLRSEMETY 1208
+ +R +++ ECSVE+LAEI+ S VK Q + VRLP ++ DPL +EMET+
Sbjct: 624 WLKTGEYERESLHEVFECSVEVLAEIDLSSSVKVSQPQCHQNVRLPRQLRDPLLNEMETF 683
Query: 1209 ILAFLTDNVIDRMLLSDIFFLCTLICNCIYSSIIASSKEENSTFHLKLCQHVVMLLQRAL 1388
ILA + + +MLLSD+FF+C L+ N IYS+ + +EE S F +KL + VV L RA
Sbjct: 684 ILATVGEKDSGKMLLSDVFFMCALLSNFIYSAFLTRLREELSLFIIKLGKCVVKFLDRAA 743
Query: 1389 CLVEECQNDLQSRGGSGCNLFLDGTGSILASVRGFVCGRLLSLCRDQTFNHDMLTRDIIE 1568
+V+E N + G N DG ++AS R VC L DQ D L II+
Sbjct: 744 SIVQESHNHIGEHGCLARNSIFDGWDLVIASFRSLVCSPLFIKWGDQIALDDALYSTIIQ 803
Query: 1569 AMERFLKVLAKLFKGYSGGRWNVHSEMLSESVSSE-----------------IDADLDLN 1697
+ER LK+LA L+ S N+ SE++ +S+ +D +LD++
Sbjct: 804 TIERLLKILANLYGKCSDCIRNLQSEIVPPDLSASDIPVQNPCPVDGSEVRIMDMELDVS 863
Query: 1698 KGSNDMD---AKGKCTPGIPLSSVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIK 1868
+ S ++D G GI S+ KWK D+IS+++SFF VLP TWEI+ DLM+ E K
Sbjct: 864 EDSKNVDIIAVSGTIASGISFSTGKWKLDMISLISSFFPVLPAVTWEILFDLMKKETHSK 923
Query: 1869 VCENILCSICEQFQ-SSPASLSDLVFLMNDMIEVRMPLNLCSVDILIAIRSLLKALISMR 2045
VCENIL S+C+ SS L+D+V MN+MI++R+ L L IL AIR+ L L+SM
Sbjct: 924 VCENILFSLCQHSHWSSSTRLTDMVISMNNMIDMRVNLKLPCYAILAAIRAFLGTLLSMG 983
Query: 2046 NSERDSNANLSPDTMSSGQSLASLGDLVNKIADVNALDWNGRVVLIDCICNLVILDPHIG 2225
+ +D +S S Q L SLGDLVN++A+ + LDW GR+ L+DCI + ++L+P IG
Sbjct: 984 TAGKDKYVGMSMSRRESEQCLISLGDLVNRVAEFDFLDWFGRIKLVDCIYDFILLNPQIG 1043
Query: 2226 QGMIEQLLRMLQDTDYRVRLFLAKRIGVLFLIWDGHDELFVDICSNFGVKMVMSSKGKLV 2405
Q MIE+LL ML+D DYRVR FLA+RIGVLF WDGHDELF DICSNFG+K+VMS KGKLV
Sbjct: 1044 QTMIERLLTMLRDQDYRVRFFLARRIGVLFQTWDGHDELFQDICSNFGIKLVMSLKGKLV 1103
Query: 2406 TAAEVRDLKLQPCSLRMETVTVTLAHLAFHSEKIEVEAIFMMCVVAAIHPCQRELVRAIL 2585
TA EV D QP S MET+ +TL HLA +SEK+E+EA+FMMC V+A+ PCQRELV A L
Sbjct: 1104 TAKEVLDAGPQPHS-TMETIIITLMHLAMYSEKMELEAVFMMCTVSALDPCQRELVLAAL 1162
Query: 2586 ENLSRKLQYTARSKYLEELMGSILFSWVACGVGLIELMEVRDLFV 2720
+NLSRKLQYT RSKYLEEL+GSILF WV CGV L+ L+E+RD FV
Sbjct: 1163 DNLSRKLQYTTRSKYLEELIGSILFCWVTCGVSLVALVEIRDHFV 1207
Score = 196 bits (499), Expect(2) = 0.0
Identities = 100/175 (57%), Positives = 119/175 (68%), Gaps = 10/175 (5%)
Frame = +2
Query: 5 RSWPKIQNLGLKDAVILYARLQLNLIRNATDGVHLVEQVLDVVCEELDQSNTTNTSITQG 184
RSW + GLKDAVI YARLQLNL R A DG LVEQ+LDVV ELDQ+N ++TS+
Sbjct: 270 RSWLTSHDRGLKDAVISYARLQLNLTRGAADGSPLVEQLLDVVGRELDQTNISSTSVPWS 329
Query: 185 ----------MTNSQIQLMELAAFVFFKACVNTTKAPSSEKRTKRENAVVRLRQGLMDGK 334
+T+SQ L+ELAA VF++AC N KAPS+ KR KRE+A R+GLM GK
Sbjct: 330 DTTKDDRLGTLTSSQCGLVELAALVFYRACANPLKAPSTAKRAKREHAAAYFREGLMKGK 389
Query: 335 WLWNSAFCFLVRNYHSRICKELLVYWFGGICDLLCGIVSEGNAVRTYDGLLWVLR 499
WLWN+AFC L NYH+RICK+L VYWF GIC I++E N YDGLLW LR
Sbjct: 390 WLWNAAFCCLTHNYHTRICKDLFVYWFEGICTSFERILNEANMEHAYDGLLWTLR 444
>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
Length = 2956
Score = 666 bits (1718), Expect(2) = 0.0
Identities = 358/744 (48%), Positives = 479/744 (64%), Gaps = 22/744 (2%)
Frame = +3
Query: 555 LSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXXXXXXXXNIISKELVNLPIVPQDIWE 734
+ + +GW T+WS L+H LPIFSN+T NI+S +L++ PIVPQ+IW+
Sbjct: 397 METSRGQFDNGWHTIWSCLMHGLPIFSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWD 456
Query: 735 LRLFMHMPSVSALYFLSCYFTRKGSQGDLREILYXXXXXXXXXXXXXXXXESFLLSDSVI 914
LRLF HMPSVS LYF+SCYF+RKGSQGDLR+IL+ ESF+L++ ++
Sbjct: 457 LRLFKHMPSVSVLYFISCYFSRKGSQGDLRDILHLRQNLLRAVLGLLEWKESFILNERMV 516
Query: 915 ILLPAAIFSLSVGCAPFPYFIKNLSIANSCFDFSEVVEDGIMAKGNQRFR-YKLLECSVE 1091
+LLPA +++L GC PF K L I++S + +ED + +R +++ ECSVE
Sbjct: 517 VLLPATVYALCTGCVPFTDCYKGLLISHSFLGVPDRIEDWLKTGEYERESLHEVFECSVE 576
Query: 1092 LLAEIEEGSDVKAMQSESQHIVRLPCRISDPLRSEMETYILAFLTDNVIDRMLLSDIFFL 1271
+LAEI+ S VK Q + VRLP ++ DPL +EMET+ILA + + +MLLSD+FF+
Sbjct: 577 VLAEIDLSSSVKVSQPQCHQNVRLPRQLRDPLLNEMETFILATVGEKDSGKMLLSDVFFM 636
Query: 1272 CTLICNCIYSSIIASSKEENSTFHLKLCQHVVMLLQRALCLVEECQNDLQSRGGSGCNLF 1451
C L+ N IYS+ + +EE S F +KL + VV L RA +V+E N + G N
Sbjct: 637 CALLSNFIYSAFLTRLREELSLFIIKLGKCVVKFLDRAASIVQESHNHIGEHGCLARNSI 696
Query: 1452 LDGTGSILASVRGFVCGRLLSLCRDQTFNHDMLTRDIIEAMERFLKVLAKLFKGYSGGRW 1631
DG ++AS R VC L DQ D L II+ +ER LK+LA L+ S
Sbjct: 697 FDGWDLVIASFRSLVCSPLFIKWGDQIALDDALYSTIIQTIERLLKILANLYGKCSDCIR 756
Query: 1632 NVHSEMLSESVSSE-----------------IDADLDLNKGSNDMD---AKGKCTPGIPL 1751
N+ SE++ +S+ +D +LD+++ S ++D G GI
Sbjct: 757 NLQSEIVPPDLSASDIPVQNPCPVDGSEVRIMDMELDVSEDSKNVDIIAVSGTIASGISF 816
Query: 1752 SSVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILCSICEQFQ-SSPASL 1928
S+ KWK D+IS+++SFF VLP TWEI+ DLM+ E KVCENIL S+C+ SS L
Sbjct: 817 STGKWKLDMISLISSFFPVLPAVTWEILFDLMKKETHSKVCENILFSLCQHSHWSSSTRL 876
Query: 1929 SDLVFLMNDMIEVRMPLNLCSVDILIAIRSLLKALISMRNSERDSNANLSPDTMSSGQSL 2108
+D+V MN+MI++R+ L L IL AIR+ L L+SM + +D +S S Q L
Sbjct: 877 TDMVISMNNMIDMRVNLKLPCYAILAAIRAFLGTLLSMGTAGKDKYVGMSMSRRESEQCL 936
Query: 2109 ASLGDLVNKIADVNALDWNGRVVLIDCICNLVILDPHIGQGMIEQLLRMLQDTDYRVRLF 2288
SLGDLVN++A+ + LDW GR+ L+DCI + ++L+P IGQ MIE+LL ML+D DYRVR F
Sbjct: 937 ISLGDLVNRVAEFDFLDWFGRIKLVDCIYDFILLNPQIGQTMIERLLTMLRDQDYRVRFF 996
Query: 2289 LAKRIGVLFLIWDGHDELFVDICSNFGVKMVMSSKGKLVTAAEVRDLKLQPCSLRMETVT 2468
LA+RIGVLF WDGHDELF DICSNFG+K+VMS KGKLVTA EV D QP S MET+
Sbjct: 997 LARRIGVLFQTWDGHDELFQDICSNFGIKLVMSLKGKLVTAKEVLDAGPQPHS-TMETII 1055
Query: 2469 VTLAHLAFHSEKIEVEAIFMMCVVAAIHPCQRELVRAILENLSRKLQYTARSKYLEELMG 2648
+TL HLA +SEK+E+EA+FMMC V+A+ PCQRELV A L+NLSRKLQYT RSKYLEEL+G
Sbjct: 1056 ITLMHLAMYSEKMELEAVFMMCTVSALDPCQRELVLAALDNLSRKLQYTTRSKYLEELIG 1115
Query: 2649 SILFSWVACGVGLIELMEVRDLFV 2720
SILF WV CGV L+ L+E+RD FV
Sbjct: 1116 SILFCWVTCGVSLVALVEIRDHFV 1139
Score = 176 bits (447), Expect(2) = 0.0
Identities = 88/161 (54%), Positives = 108/161 (67%), Gaps = 10/161 (6%)
Frame = +2
Query: 47 VILYARLQLNLIRNATDGVHLVEQVLDVVCEELDQSNTTNTSITQG----------MTNS 196
+ + RLQLNL R A DG LVEQ+LDVV ELDQ+N ++TS+ +T+S
Sbjct: 224 IFSFLRLQLNLTRGAADGSPLVEQLLDVVGRELDQTNISSTSVPWSDTTKDDRLGTLTSS 283
Query: 197 QIQLMELAAFVFFKACVNTTKAPSSEKRTKRENAVVRLRQGLMDGKWLWNSAFCFLVRNY 376
Q L+ELAA VF++AC N KAPS+ KR KRE+A R+GLM GKWLWN+AFC L NY
Sbjct: 284 QCGLVELAALVFYRACANPLKAPSTAKRAKREHAAAYFREGLMKGKWLWNAAFCCLTHNY 343
Query: 377 HSRICKELLVYWFGGICDLLCGIVSEGNAVRTYDGLLWVLR 499
H+RICK+L VYWF GIC I++E N YDGLLW LR
Sbjct: 344 HTRICKDLFVYWFEGICTSFERILNEANMEHAYDGLLWTLR 384
>ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis]
gi|223550511|gb|EEF51998.1| ataxia telangiectasia
mutated, putative [Ricinus communis]
Length = 2954
Score = 569 bits (1466), Expect(2) = 0.0
Identities = 320/744 (43%), Positives = 458/744 (61%), Gaps = 25/744 (3%)
Frame = +3
Query: 573 ELGSGWLTVWSSLVHALPIFSNVTXXXXXXXXXXXNIISKELVNLPIVPQDIWELRLFMH 752
EL SGW +WS L+H LP+FSN T NI++ +++N+ +VPQDIW+L+LF
Sbjct: 409 ELDSGWQLIWSHLIHGLPLFSNSTSVVNAALLLLGNILTSDMMNIFVVPQDIWDLKLFKQ 468
Query: 753 MPSVSALYFLSCYFTRKGSQGDLREILYXXXXXXXXXXXXXXXXESFLLSDSVIILLPAA 932
MPS LYF++CYF+ KGSQGDLR+ L+ ++ +L++ +++L PAA
Sbjct: 469 MPSRCVLYFIACYFSHKGSQGDLRDSLHLRKNLLTTILGYLNWKDTSILNEHMVVLFPAA 528
Query: 933 IFSLSVGCAPFPYFIKNLSIANSCF---DFSEVVEDGIMAKGNQRFRYKLLECSVELLAE 1103
+++L GCAPF + K L +++ D+++ ED +R Y+ ECSVE+LA+
Sbjct: 529 VYALCAGCAPFTHCYKGLLPSHNLEASGDWAKTYEDEC-----ERL-YEPFECSVEVLAK 582
Query: 1104 IEEGSDVKAMQSESQHIVRLPCRISDPLRSEMETYILAFLTDNVIDRMLLSDIFFLCTLI 1283
I+ GS V+ S+ V LPC + D L EMET+I L D ++M L D F C L+
Sbjct: 583 IDLGSTVELASSQCNRSVSLPCELRDTLMHEMETHIFGALGDKQTEKMPLCDAIFTCGLL 642
Query: 1284 CNCIYSSIIASSKEENSTFHLKLCQHVVMLLQRALCLVEECQNDLQSRGGSGCNLFLDGT 1463
N I+ S++ ++E F K Q+++ LL A+ LV E +D QS G SG +
Sbjct: 643 SNFIHGSLVTRKRDEILPFLSKTGQYLIDLLGYAVNLVTENGSDFQSLGCSGSTSECNVK 702
Query: 1464 GSILASVRGFVCGRLLSLCRDQTFNHDMLTRDIIEAMERFLKVLAKLFKGYSGGRWNVHS 1643
S+L S R +C + D+ L+ D+I+ MER LK LAKL++ +S + HS
Sbjct: 703 NSLLQSFRSLLCCPIFVKGEDKNALDAALSGDVIQCMERLLKALAKLYEQFSECTRSSHS 762
Query: 1644 EM---------------LSESVSSEIDADLDLNKGSNDMDAK---GKCTPGIPLSSVKWK 1769
E+ L S S +D +LD+N+ + D+D GK + I S +KWK
Sbjct: 763 EVVLSDSSDASLQISSPLDGSRSRILDVELDVNEDTQDVDILSFGGKVSTAISFSMIKWK 822
Query: 1770 FDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILCSICEQ-FQSSPASLSDLVFL 1946
+IS+++SFF VL + TW+I+ ++M E + KV ENIL +C+ SS L DLV +
Sbjct: 823 MGMISLISSFFSVLGLVTWDILFEVMGKECETKVFENILYHLCQHPHWSSAGKLIDLVIM 882
Query: 1947 ---MNDMIEVRMPLNLCSVDILIAIRSLLKALISMRNSERDSNANLSPDTMSSGQSLASL 2117
+++MIE+++ L I++A + L+ L+S+ ++D A+LS Q L L
Sbjct: 883 VQTLDNMIEIKVGAKLNCASIVVATQRLMHTLLSLNGIQKD--ADLSLTGREHEQGLIHL 940
Query: 2118 GDLVNKIADVNALDWNGRVVLIDCICNLVILDPHIGQGMIEQLLRMLQDTDYRVRLFLAK 2297
G +V+K+A+ LDW GRV LI CIC+ V+L P GQ MI +L +L+D DYRVR LA+
Sbjct: 941 GSVVSKVAEFGFLDWRGRVKLIGCICDFVVLSPQNGQTMIGRLFLLLRDPDYRVRFSLAQ 1000
Query: 2298 RIGVLFLIWDGHDELFVDICSNFGVKMVMSSKGKLVTAAEVRDLKLQPCSLRMETVTVTL 2477
RIGVLF WDGH+ELF DI SNFGV +V+ SKGKLVTA EV QPC L MET+ +TL
Sbjct: 1001 RIGVLFETWDGHEELFQDIYSNFGVTLVLHSKGKLVTAKEVLAAGPQPC-LAMETIIITL 1059
Query: 2478 AHLAFHSEKIEVEAIFMMCVVAAIHPCQRELVRAILENLSRKLQYTARSKYLEELMGSIL 2657
HLAFHSEK+E+EAIF++C VAAI+PC RELV A+L++LSR+LQY R KYLEEL+G+IL
Sbjct: 1060 MHLAFHSEKVELEAIFIICAVAAINPCHRELVSAVLDDLSRQLQYATRFKYLEELIGTIL 1119
Query: 2658 FSWVACGVGLIELMEVRDLFVLNS 2729
F WV+CGV L+ L+E+R LFVL++
Sbjct: 1120 FFWVSCGVSLVALVEIRQLFVLDA 1143
Score = 155 bits (393), Expect(2) = 0.0
Identities = 78/161 (48%), Positives = 108/161 (67%), Gaps = 10/161 (6%)
Frame = +2
Query: 47 VILYARLQLNLIRNATDGVHLVEQVLDVVCEELDQSNTTNTSITQ----------GMTNS 196
+ + RLQLNL R A++ +VEQ LDVVC+ELDQS+ T+ ++ +T S
Sbjct: 222 IFSFIRLQLNLTRGASESGSMVEQFLDVVCKELDQSSLTSITVPWMDATKDEKFGTLTGS 281
Query: 197 QIQLMELAAFVFFKACVNTTKAPSSEKRTKRENAVVRLRQGLMDGKWLWNSAFCFLVRNY 376
Q L+ELAA + ++ACV+T KA S+EKR KRE+A V L++ L GKWLWN+AFC+L+RNY
Sbjct: 282 QCGLVELAALLLYQACVSTPKAQSTEKRIKREHATVLLKEALKKGKWLWNAAFCYLIRNY 341
Query: 377 HSRICKELLVYWFGGICDLLCGIVSEGNAVRTYDGLLWVLR 499
SR+ K+L++YWF GI I+++ V YD LLW LR
Sbjct: 342 CSRMNKDLIIYWFDGISTSFERILNDTTMVHAYDSLLWTLR 382
>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
Length = 3856
Score = 505 bits (1300), Expect(2) = e-177
Identities = 299/763 (39%), Positives = 442/763 (57%), Gaps = 17/763 (2%)
Frame = +3
Query: 492 SCDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXXXXXX 671
S LSS LP + ++ S+ S +EL GW ++WSSL+H L FS+++
Sbjct: 1255 SLQGLSSGLSLPDITMDISKS-SASSSELDRGWQSIWSSLIHGLATFSSMSVIVDAVLVL 1313
Query: 672 XXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLSCYFTRKGSQGDLREILYXXXXX 851
+IIS + + I+PQ++W+ +LF H+PS ALYF++CYF+R G QG+L++ L+
Sbjct: 1314 LGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIACYFSRMGCQGNLQDDLHLRRNL 1373
Query: 852 XXXXXXXXXXXESFLLSDSVIILLPAAIFSLSVGCAPFPYFIKNLSIANSCFDFSEVVED 1031
L + ++ LLPAA FSL G K S +D E ++D
Sbjct: 1374 LRAVCAPLSWKVRLTLDERMVQLLPAAAFSLCAGFKVSLPLPKEHLPTPSQWDVCEQIDD 1433
Query: 1032 GIMAKGNQRFRYKLLECSVELLAEIEEGSDVKAMQSESQHIVRLPCRISDPLRSEMETYI 1211
++ + L ECSVE L I S K + +V+LP + DPL +M+ Y
Sbjct: 1434 V-----DRERNFGLFECSVEALTRICSNSS-KISGCQVPDVVQLPLVLRDPLLHDMDIYF 1487
Query: 1212 LAFLTDNVIDRMLLSDIFFLCTLICNCIYSSIIASSKEENSTFHLKLCQHVVMLLQRALC 1391
L+ + + V ++ LSDIF C L+C+ ++ S I + +S+F LK CQ+++ L A+
Sbjct: 1488 LSIIPE-VKEKGPLSDIFMGCALLCHFMHGSYITRKGKGSSSFFLKACQYLLEGLDHAVE 1546
Query: 1392 LVEECQNDLQSRGGSGCNLFLDGTGSILASVRGFVCGRLLSLCRDQTF---NHDMLTRDI 1562
V + NDLQ RG G + GSI+ S+R F + S RDQ ++D +
Sbjct: 1547 SVSKSLNDLQRRGSLGFGSDFNEKGSIIVSLRSFTQSPVFSNRRDQNLLGASYDF----V 1602
Query: 1563 IEAMERFLKVLAKLFKGYSGGRWNVHSEML--------SESVSSEIDADLDLNKGSNDMD 1718
I ++E L+ AK+++ Y+ WN HS+ + S V +D DLDL + + + D
Sbjct: 1603 IHSLENLLRSFAKVYEEYTEHAWNTHSDTVPSKSLAPDSPEVGRIVDMDLDLAEDTKERD 1662
Query: 1719 ---AKGKCTPGIPLSSVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILC 1889
A GK PG+P+S WK ++S+++ F VL TW+++ +L+E E+D KV ENIL
Sbjct: 1663 IIAAGGKAVPGLPVSMGNWKLGMVSLISCFSPVLQFPTWDVLYNLLEKESDPKVLENILY 1722
Query: 1890 SICE-QFQSSPASLSDLVFLMNDMIEVRMPLNLCSVDILIAIRSLLKALISMR--NSERD 2060
+C+ +S + DLV ++ M+ ++ + ++I+ A+ LL L S R +S +
Sbjct: 1723 HLCKLSCLTSIPKVDDLVIFLDGMLSTQVKMKRNCLNIVTALHVLLHTLSSSRRDSSGVE 1782
Query: 2061 SNANLSPDTMSSGQSLASLGDLVNKIADVNALDWNGRVVLIDCICNLVILDPHIGQGMIE 2240
N LS S Q LG +VNK+++ L W GRV LI+CIC+LV+L+P GQ MIE
Sbjct: 1783 KNCGLSLKEAESFQVFVQLGAMVNKVSEFGLLGWFGRVKLINCICDLVLLNPQTGQTMIE 1842
Query: 2241 QLLRMLQDTDYRVRLFLAKRIGVLFLIWDGHDELFVDICSNFGVKMVMSSKGKLVTAAEV 2420
+LL ML D+DYRVR LA++IG+LF WDGH+ LF DICS+FG+K+V SSK KLVTA +V
Sbjct: 1843 RLLLMLSDSDYRVRFVLARQIGILFQTWDGHEALFQDICSSFGIKLVTSSKEKLVTAKDV 1902
Query: 2421 RDLKLQPCSLRMETVTVTLAHLAFHSEKIEVEAIFMMCVVAAIHPCQRELVRAILENLSR 2600
+ QP +METV +TL HLA+HSE IE++A+FMMC V+A PCQREL+ A L+NLS
Sbjct: 1903 LAVGPQP-RQKMETVIITLMHLAYHSENIELQAVFMMCAVSAKDPCQRELIIAALDNLSA 1961
Query: 2601 KLQYTARSKYLEELMGSILFSWVACGVGLIELMEVRDLFVLNS 2729
+L Y +R KYLEEL+G ILF W+A GV L L+E LF+ N+
Sbjct: 1962 QLHYPSRFKYLEELLGPILFHWIASGVSLAGLIETSQLFIPNA 2004
Score = 146 bits (369), Expect(2) = e-177
Identities = 76/175 (43%), Positives = 109/175 (62%), Gaps = 9/175 (5%)
Frame = +2
Query: 2 FRSWPKIQNLGLKDAVILYARLQLNLIRNATDGVHLVEQVLDVVCEELDQSN-------- 157
FR W + LK+ ++ Y RLQLNL R++++ LVEQ+LDVV ELD +
Sbjct: 1080 FRCWLTTHDKNLKEILVSYGRLQLNLTRDSSESSSLVEQLLDVVTRELDLGSSSSSASWG 1139
Query: 158 -TTNTSITQGMTNSQIQLMELAAFVFFKACVNTTKAPSSEKRTKRENAVVRLRQGLMDGK 334
TT +++ Q L+ELAA VF++ACVNT++ SEKR +R++ +R+ L +GK
Sbjct: 1140 DTTKDEKLGALSSYQNSLVELAAHVFYRACVNTSRPSLSEKRARRQHIAMRMVDALTEGK 1199
Query: 335 WLWNSAFCFLVRNYHSRICKELLVYWFGGICDLLCGIVSEGNAVRTYDGLLWVLR 499
WLW +AF LVRNY +RI +LL+YWF IC ++ + + R+YDGLLW LR
Sbjct: 1200 WLWCAAFGCLVRNYCARINMDLLIYWFEAICTNFQRLLEDASMRRSYDGLLWTLR 1254
>sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName:
Full=Ataxia telangiectasia mutated homolog; Short=AtATM
gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana]
Length = 3856
Score = 505 bits (1300), Expect(2) = e-177
Identities = 299/763 (39%), Positives = 442/763 (57%), Gaps = 17/763 (2%)
Frame = +3
Query: 492 SCDELSSIQLLPGLGVEASQCLSVGMNELGSGWLTVWSSLVHALPIFSNVTXXXXXXXXX 671
S LSS LP + ++ S+ S +EL GW ++WSSL+H L FS+++
Sbjct: 1255 SLQGLSSGLSLPDITMDISKS-SASSSELDRGWQSIWSSLIHGLATFSSMSVIVDAVLVL 1313
Query: 672 XXNIISKELVNLPIVPQDIWELRLFMHMPSVSALYFLSCYFTRKGSQGDLREILYXXXXX 851
+IIS + + I+PQ++W+ +LF H+PS ALYF++CYF+R G QG+L++ L+
Sbjct: 1314 LGSIISSNHITVKILPQEVWDHQLFRHIPSEPALYFIACYFSRMGCQGNLQDDLHLRRNL 1373
Query: 852 XXXXXXXXXXXESFLLSDSVIILLPAAIFSLSVGCAPFPYFIKNLSIANSCFDFSEVVED 1031
L + ++ LLPAA FSL G K S +D E ++D
Sbjct: 1374 LRAVCAPLSWKVRLTLDERMVQLLPAAAFSLCAGFKVSLPLPKEHLPTPSQWDVCEQIDD 1433
Query: 1032 GIMAKGNQRFRYKLLECSVELLAEIEEGSDVKAMQSESQHIVRLPCRISDPLRSEMETYI 1211
++ + L ECSVE L I S K + +V+LP + DPL +M+ Y
Sbjct: 1434 V-----DRERNFGLFECSVEALTRICSNSS-KISGCQVPDVVQLPLVLRDPLLHDMDIYF 1487
Query: 1212 LAFLTDNVIDRMLLSDIFFLCTLICNCIYSSIIASSKEENSTFHLKLCQHVVMLLQRALC 1391
L+ + + V ++ LSDIF C L+C+ ++ S I + +S+F LK CQ+++ L A+
Sbjct: 1488 LSIIPE-VKEKGPLSDIFMGCALLCHFMHGSYITRKGKGSSSFFLKACQYLLEGLDHAVE 1546
Query: 1392 LVEECQNDLQSRGGSGCNLFLDGTGSILASVRGFVCGRLLSLCRDQTF---NHDMLTRDI 1562
V + NDLQ RG G + GSI+ S+R F + S RDQ ++D +
Sbjct: 1547 SVSKSLNDLQRRGSLGFGSDFNEKGSIIVSLRSFTQSPVFSNRRDQNLLGASYDF----V 1602
Query: 1563 IEAMERFLKVLAKLFKGYSGGRWNVHSEML--------SESVSSEIDADLDLNKGSNDMD 1718
I ++E L+ AK+++ Y+ WN HS+ + S V +D DLDL + + + D
Sbjct: 1603 IHSLENLLRSFAKVYEEYTEHAWNTHSDTVPSKSLAPDSPEVGRIVDMDLDLAEDTKERD 1662
Query: 1719 ---AKGKCTPGIPLSSVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILC 1889
A GK PG+P+S WK ++S+++ F VL TW+++ +L+E E+D KV ENIL
Sbjct: 1663 IIAAGGKAVPGLPVSMGNWKLGMVSLISCFSPVLQFPTWDVLYNLLEKESDPKVLENILY 1722
Query: 1890 SICE-QFQSSPASLSDLVFLMNDMIEVRMPLNLCSVDILIAIRSLLKALISMR--NSERD 2060
+C+ +S + DLV ++ M+ ++ + ++I+ A+ LL L S R +S +
Sbjct: 1723 HLCKLSCLTSIPKVDDLVIFLDGMLSTQVKMKRNCLNIVTALHVLLHTLSSSRRDSSGVE 1782
Query: 2061 SNANLSPDTMSSGQSLASLGDLVNKIADVNALDWNGRVVLIDCICNLVILDPHIGQGMIE 2240
N LS S Q LG +VNK+++ L W GRV LI+CIC+LV+L+P GQ MIE
Sbjct: 1783 KNCGLSLKEAESFQVFVQLGAMVNKVSEFGLLGWFGRVKLINCICDLVLLNPQTGQTMIE 1842
Query: 2241 QLLRMLQDTDYRVRLFLAKRIGVLFLIWDGHDELFVDICSNFGVKMVMSSKGKLVTAAEV 2420
+LL ML D+DYRVR LA++IG+LF WDGH+ LF DICS+FG+K+V SSK KLVTA +V
Sbjct: 1843 RLLLMLSDSDYRVRFVLARQIGILFQTWDGHEALFQDICSSFGIKLVTSSKEKLVTAKDV 1902
Query: 2421 RDLKLQPCSLRMETVTVTLAHLAFHSEKIEVEAIFMMCVVAAIHPCQRELVRAILENLSR 2600
+ QP +METV +TL HLA+HSE IE++A+FMMC V+A PCQREL+ A L+NLS
Sbjct: 1903 LAVGPQP-RQKMETVIITLMHLAYHSENIELQAVFMMCAVSAKDPCQRELIIAALDNLSA 1961
Query: 2601 KLQYTARSKYLEELMGSILFSWVACGVGLIELMEVRDLFVLNS 2729
+L Y +R KYLEEL+G ILF W+A GV L L+E LF+ N+
Sbjct: 1962 QLHYPSRFKYLEELLGPILFHWIASGVSLAGLIETSQLFIPNA 2004
Score = 146 bits (369), Expect(2) = e-177
Identities = 76/175 (43%), Positives = 109/175 (62%), Gaps = 9/175 (5%)
Frame = +2
Query: 2 FRSWPKIQNLGLKDAVILYARLQLNLIRNATDGVHLVEQVLDVVCEELDQSN-------- 157
FR W + LK+ ++ Y RLQLNL R++++ LVEQ+LDVV ELD +
Sbjct: 1080 FRCWLTTHDKNLKEILVSYGRLQLNLTRDSSESSSLVEQLLDVVTRELDLGSSSSSASWG 1139
Query: 158 -TTNTSITQGMTNSQIQLMELAAFVFFKACVNTTKAPSSEKRTKRENAVVRLRQGLMDGK 334
TT +++ Q L+ELAA VF++ACVNT++ SEKR +R++ +R+ L +GK
Sbjct: 1140 DTTKDEKLGALSSYQNSLVELAAHVFYRACVNTSRPSLSEKRARRQHIAMRMVDALTEGK 1199
Query: 335 WLWNSAFCFLVRNYHSRICKELLVYWFGGICDLLCGIVSEGNAVRTYDGLLWVLR 499
WLW +AF LVRNY +RI +LL+YWF IC ++ + + R+YDGLLW LR
Sbjct: 1200 WLWCAAFGCLVRNYCARINMDLLIYWFEAICTNFQRLLEDASMRRSYDGLLWTLR 1254