BLASTX nr result

ID: Coptis23_contig00017983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017983
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510487.1| lysine-specific histone demethylase, putativ...   445   e-123
ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255...   440   e-121
ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Popul...   421   e-115
ref|XP_003544397.1| PREDICTED: uncharacterized protein LOC100791...   421   e-115
ref|XP_003603734.1| Lysine-specific histone demethylase-like pro...   420   e-115

>ref|XP_002510487.1| lysine-specific histone demethylase, putative [Ricinus communis]
            gi|223551188|gb|EEF52674.1| lysine-specific histone
            demethylase, putative [Ricinus communis]
          Length = 1947

 Score =  445 bits (1144), Expect = e-123
 Identities = 223/311 (71%), Positives = 264/311 (84%), Gaps = 3/311 (0%)
 Frame = -2

Query: 925  QGIQAVAADSSEAINDMQCDSEIRKRIIVVGAGPAGLTAARHLQRQGFSVTILEARNRLG 746
            Q IQ+ + + +    +  CDSE RK+IIVVGAGPAGLTAARHLQRQGFSV +LEAR+R+G
Sbjct: 871  QSIQSSSCNDAGRDYNFLCDSEGRKKIIVVGAGPAGLTAARHLQRQGFSVAVLEARSRIG 930

Query: 745  GRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCSQLGLELTVLNSDCPLYDT 566
            GRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSL+C+QLGLELTVLNSDCPLYD 
Sbjct: 931  GRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDI 990

Query: 565  VTGQKVPLELDEALEAEYNSLLDDMVVLMEEQGDRATKMSLEDGLEYALKKRRMAQSISD 386
            VT +KVP +LDEALEAEYNSLLDDMV+L+ ++G+ A KMSLEDGLEYALK+RR A+S +D
Sbjct: 991  VTREKVPTDLDEALEAEYNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRAARSRTD 1050

Query: 385  TEDLEFDTLASDSFDTRTNGHDKGI---TSDKEVLSPLERRVMNWHFANLEYGCAALLKE 215
             ++ EF T A D + + +   D G+   +S +E+LSPLERRVM+WHFA+LEYGCAALLKE
Sbjct: 1051 IDETEFAT-AEDLYGSESCSVDGGVHEKSSKEEILSPLERRVMDWHFAHLEYGCAALLKE 1109

Query: 214  VSLPYWNQDDVYGGFGGAHCMIKGGYSTVIESLGKGLAVHLNHVVTEVSYSTMGCGETND 35
            VSLPYWNQDDVYGGFGGAHCMIKGGYS V+ESL +GL +HLNH+VT++SYST   G +  
Sbjct: 1110 VSLPYWNQDDVYGGFGGAHCMIKGGYSNVVESLSEGLRIHLNHIVTDISYSTKETGLSES 1169

Query: 34   LHGKVKVSTSN 2
             + KVK+STSN
Sbjct: 1170 QNNKVKISTSN 1180


>ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255769 [Vitis vinifera]
          Length = 2145

 Score =  440 bits (1132), Expect = e-121
 Identities = 226/328 (68%), Positives = 270/328 (82%), Gaps = 4/328 (1%)
 Frame = -2

Query: 973  DSGSDSFVGFKKIKESQGIQAVAADSSEAINDMQCDSEIRKRIIVVGAGPAGLTAARHLQ 794
            DSG+   +  + + ES G+++ + DS++  +++Q DS++RK+IIVVGAGPAGLTAARHLQ
Sbjct: 948  DSGTIPTIAPELMNESCGVESASMDSAKRDHNVQFDSDVRKKIIVVGAGPAGLTAARHLQ 1007

Query: 793  RQGFSVTILEARNRLGGRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCSQL 614
            R GFSV +LEAR+R+GGRVYTD SSLSVPVDLGASIITGVEADV TERRPDPSSLVC+QL
Sbjct: 1008 RHGFSVIVLEARSRIGGRVYTDHSSLSVPVDLGASIITGVEADVDTERRPDPSSLVCAQL 1067

Query: 613  GLELTVLNSDCPLYDTVTGQKVPLELDEALEAEYNSLLDDMVVLMEEQGDRATKMSLEDG 434
            GLELTVLNSDCPLYD VTGQKVP +LDEALEAEYNSLLDDMV+++ ++G+ A KMSLE+G
Sbjct: 1068 GLELTVLNSDCPLYDIVTGQKVPADLDEALEAEYNSLLDDMVLIVAQKGEHAMKMSLEEG 1127

Query: 433  LEYALKKRRMAQSISDTEDLEFDTLASDSFDTRTNGHDKGI----TSDKEVLSPLERRVM 266
            LEYALK+RRM +  SD  + E   L   S D+     D+ +    +S +EVLSP+ERRVM
Sbjct: 1128 LEYALKRRRMPRLGSDYTENELQNLDKPSLDSEKIIVDRKMLERNSSKEEVLSPIERRVM 1187

Query: 265  NWHFANLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVIESLGKGLAVHLNH 86
            +WHFA+LEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYS+VIESLG+GL + LN 
Sbjct: 1188 DWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSSVIESLGEGLHILLNQ 1247

Query: 85   VVTEVSYSTMGCGETNDLHGKVKVSTSN 2
            VVT+VSYS+   G T     KVKVSTSN
Sbjct: 1248 VVTDVSYSSKDAGGTGSQCKKVKVSTSN 1275


>ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Populus trichocarpa]
            gi|222857150|gb|EEE94697.1| hypothetical protein
            POPTRDRAFT_73001 [Populus trichocarpa]
          Length = 1669

 Score =  421 bits (1083), Expect = e-115
 Identities = 214/312 (68%), Positives = 251/312 (80%), Gaps = 5/312 (1%)
 Frame = -2

Query: 922  GIQAVAADSSEAI---NDMQCDSEIRKRIIVVGAGPAGLTAARHLQRQGFSVTILEARNR 752
            G+Q+V ++S   +   + + CDS+ RK+IIV+GAGPAGLTAARHLQRQGFSVTILEAR+R
Sbjct: 845  GLQSVKSNSCAEMGGSHKLLCDSQDRKKIIVIGAGPAGLTAARHLQRQGFSVTILEARSR 904

Query: 751  LGGRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCSQLGLELTVLNSDCPLY 572
            +GGRVYTD SSLSVPVDLGASIITGVEADV TERRPDPSSL+C+QLGLELTVLNSDCPLY
Sbjct: 905  IGGRVYTDHSSLSVPVDLGASIITGVEADVTTERRPDPSSLICAQLGLELTVLNSDCPLY 964

Query: 571  DTVTGQKVPLELDEALEAEYNSLLDDMVVLMEEQGDRATKMSLEDGLEYALKKRRMAQSI 392
            D VTG+KVP +LDE LEAEYNSLLDDMV+++ ++G  A KMSLEDGL YALK RRMA   
Sbjct: 965  DIVTGEKVPTDLDEELEAEYNSLLDDMVLVIAQKGQHAMKMSLEDGLNYALKTRRMAHPG 1024

Query: 391  SDTEDLEFDTLASDSFDTRTNGHDKGI--TSDKEVLSPLERRVMNWHFANLEYGCAALLK 218
            +  ++ E        +D++T   D G    S +E+LSPLERRVM+WHFA+LEYGCAA LK
Sbjct: 1025 AFFDETESGNAVDALYDSKTCSVDGGAPENSKEEILSPLERRVMDWHFAHLEYGCAASLK 1084

Query: 217  EVSLPYWNQDDVYGGFGGAHCMIKGGYSTVIESLGKGLAVHLNHVVTEVSYSTMGCGETN 38
            EVSLPYWNQDDVYGGFGGAHCMIKGGYS V+ESLG+ L +HLNHVVT++SY       + 
Sbjct: 1085 EVSLPYWNQDDVYGGFGGAHCMIKGGYSNVVESLGERLPIHLNHVVTDISYGIKDARASV 1144

Query: 37   DLHGKVKVSTSN 2
                KVKV TSN
Sbjct: 1145 SHRSKVKVCTSN 1156


>ref|XP_003544397.1| PREDICTED: uncharacterized protein LOC100791869 [Glycine max]
          Length = 1866

 Score =  421 bits (1082), Expect = e-115
 Identities = 221/321 (68%), Positives = 265/321 (82%), Gaps = 4/321 (1%)
 Frame = -2

Query: 952  VGFKKIKESQGIQAVAADSSEAINDMQCDSEIRKRIIVVGAGPAGLTAARHLQRQGFSVT 773
            V  +KI +S  I++ A D+    + +Q D + RKR+IV+GAGPAGLTAARHLQRQGF+VT
Sbjct: 765  VAEEKINDSTSIKS-ALDALVG-DHLQSDLDPRKRVIVIGAGPAGLTAARHLQRQGFAVT 822

Query: 772  ILEARNRLGGRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCSQLGLELTVL 593
            +LEAR+R+GGRV+TD SSLSVPVDLGASIITGVEADVATERRPDPSSL+C+QLGLELTVL
Sbjct: 823  VLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVL 882

Query: 592  NSDCPLYDTVTGQKVPLELDEALEAEYNSLLDDMVVLMEEQGDRATKMSLEDGLEYALKK 413
            NSDCPLYD VTGQKVP ++DEALEAEYNSL+DDMV+++ ++G++A +MSLEDGLEYALK 
Sbjct: 883  NSDCPLYDIVTGQKVPADMDEALEAEYNSLIDDMVLVVAQKGEQAMRMSLEDGLEYALKI 942

Query: 412  RRMAQSISDTEDLEFDTLASDSFDTRTNGHDKGITSDK----EVLSPLERRVMNWHFANL 245
            RRMA+S S +E+ E +  A   FD++     K  T +K    E+LSP ERRVM+WHFA+L
Sbjct: 943  RRMARSES-SEETEQNNSADSPFDSK-----KDSTVEKKFGEEILSPQERRVMDWHFAHL 996

Query: 244  EYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVIESLGKGLAVHLNHVVTEVSY 65
            EYGCAALLK+VSLPYWNQDDVYGGFGGAHCMIKGGYS+V ESLG+GL +HLNHVVT VSY
Sbjct: 997  EYGCAALLKDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVAESLGEGLTIHLNHVVTNVSY 1056

Query: 64   STMGCGETNDLHGKVKVSTSN 2
                 G+ N    KVKVST+N
Sbjct: 1057 GIKEPGQNN----KVKVSTAN 1073


>ref|XP_003603734.1| Lysine-specific histone demethylase-like protein [Medicago
            truncatula] gi|355492782|gb|AES73985.1| Lysine-specific
            histone demethylase-like protein [Medicago truncatula]
          Length = 2063

 Score =  420 bits (1080), Expect = e-115
 Identities = 216/312 (69%), Positives = 252/312 (80%), Gaps = 1/312 (0%)
 Frame = -2

Query: 934  KESQGIQAVAADSSEAIND-MQCDSEIRKRIIVVGAGPAGLTAARHLQRQGFSVTILEAR 758
            ++S     V + S + I D +  DS+I KR+IV+GAGPAGLTAARHLQR GF+VT+LEAR
Sbjct: 853  EQSNESTCVKSASGDQIGDVLNFDSKIGKRVIVIGAGPAGLTAARHLQRLGFTVTVLEAR 912

Query: 757  NRLGGRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCSQLGLELTVLNSDCP 578
            +R+GGRV+TDRSSLSVPVDLGASIITGVEADVATERRPDPS+LVC+QLGLELTVLNSDCP
Sbjct: 913  SRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSALVCAQLGLELTVLNSDCP 972

Query: 577  LYDTVTGQKVPLELDEALEAEYNSLLDDMVVLMEEQGDRATKMSLEDGLEYALKKRRMAQ 398
            LYD VTGQKVP+++DEALEAEYNSLLDDMV+L+ ++GD+A +MSLEDGLEYALK+RR+ +
Sbjct: 973  LYDIVTGQKVPVDMDEALEAEYNSLLDDMVLLVAQKGDQAMRMSLEDGLEYALKRRRLER 1032

Query: 397  SISDTEDLEFDTLASDSFDTRTNGHDKGITSDKEVLSPLERRVMNWHFANLEYGCAALLK 218
            S                   R +   +     +EVLSP ERR+M+WHFANLEYGCAALLK
Sbjct: 1033 S-------------------RRSNEQRSGKEMEEVLSPQERRIMDWHFANLEYGCAALLK 1073

Query: 217  EVSLPYWNQDDVYGGFGGAHCMIKGGYSTVIESLGKGLAVHLNHVVTEVSYSTMGCGETN 38
            EVSLPYWNQDDVYGG+GGAHCMIKGGYSTV+ESLGKGL +HLNHVVT VSY +   G   
Sbjct: 1074 EVSLPYWNQDDVYGGYGGAHCMIKGGYSTVVESLGKGLVIHLNHVVTNVSYDSKESG--- 1130

Query: 37   DLHGKVKVSTSN 2
             L  KVKVSTSN
Sbjct: 1131 -LGNKVKVSTSN 1141


Top