BLASTX nr result

ID: Coptis23_contig00017972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017972
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...   122   3e-26
ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250...   118   4e-25
emb|CBI16424.3| unnamed protein product [Vitis vinifera]              118   4e-25

>ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  134 bits (336), Expect = 1e-29
 Identities = 73/118 (61%), Positives = 89/118 (75%), Gaps = 4/118 (3%)
 Frame = -2

Query: 344  QQSSNETFVLMNSNNTITMEEMPESGTDAALQATFRFVSEDLNSSNSFPENSFIGKTVMM 165
            Q S N TFVL NSN +ITMEE P+SGTDA LQATFR V  D +SS     N  I K+VM+
Sbjct: 666  QDSGNSTFVLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVLGINDVIDKSVML 725

Query: 164  EPFDLPGLLVVQQGKNQNLAVGDT---EGSSMFRVVKGLD-KKGTVSLESVSQKGCFL 3
            EPFDLPG+L+VQQGK+ +LAV ++   +GSS+F VV GLD K GTVSLES SQ+GC++
Sbjct: 726  EPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSLESGSQEGCYI 783


>ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  127 bits (319), Expect = 1e-27
 Identities = 68/118 (57%), Positives = 88/118 (74%), Gaps = 4/118 (3%)
 Frame = -2

Query: 344  QQSSNETFVLMNSNNTITMEEMPESGTDAALQATFRFVSEDLNSSNSFPENSFIGKTVMM 165
            Q+S   TFVL NSN +I+ME++PESGTDA+LQATFR V +D +SS        IGK+VM+
Sbjct: 665  QESGISTFVLTNSNQSISMEKLPESGTDASLQATFRLVFKDSSSSKLSSVKDVIGKSVML 724

Query: 164  EPFDLPGLLVVQQGKNQNLAV---GDTEGSSMFRVVKGLD-KKGTVSLESVSQKGCFL 3
            EPF LPG+L+VQQGK+++  +    D +GSS+FRVV GLD K GTVSLES  Q GC++
Sbjct: 725  EPFHLPGMLLVQQGKDRSFTLTNSADDDGSSIFRVVSGLDGKDGTVSLESGIQNGCYV 782


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 3/117 (2%)
 Frame = -2

Query: 344  QQSSNETFVLMNSNNTITMEEMPESGTDAALQATFRFVSEDLNSSNSFPENSFIGKTVMM 165
            Q+S N +FV  NSN +ITME+ PE GTDA+L ATFR V +D  S         IGK+VM+
Sbjct: 671  QESGNSSFVFSNSNQSITMEKFPEEGTDASLHATFRLVLKDATSLKVLSPKDAIGKSVML 730

Query: 164  EPFDLPGLLVVQQGKNQNLAVGDTEG--SSMFRVVKGLD-KKGTVSLESVSQKGCFL 3
            EP DLPG++VVQQG NQNL + ++     S+F +V GLD K GTVSLES SQK C++
Sbjct: 731  EPIDLPGMVVVQQGTNQNLGIANSAAGKGSLFHLVAGLDGKDGTVSLESESQKDCYV 787


>ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera]
          Length = 874

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
 Frame = -2

Query: 344  QQSSNETFVLMNSNNTITMEEMPESGTDAALQATFRFVSEDLNSSNSFPENSFIGKTVMM 165
            Q+S N +F   NSN ++TME  PESGTDA+L ATFR + ED  SS        IGK VM+
Sbjct: 674  QESGNSSFAFTNSNQSLTMERYPESGTDASLNATFRLILEDSTSSKISSPKDAIGKFVML 733

Query: 164  EPFDLPGLLVVQQGKNQNLAVGDTE---GSSMFRVVKGLD-KKGTVSLESVSQKGCFL 3
            EP + PG+ VVQ+G N++L + ++    GSS+F +V GLD K GTVSLES +QKGCF+
Sbjct: 734  EPINFPGMAVVQRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSLESKTQKGCFV 791


>emb|CBI16424.3| unnamed protein product [Vitis vinifera]
          Length = 741

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
 Frame = -2

Query: 344 QQSSNETFVLMNSNNTITMEEMPESGTDAALQATFRFVSEDLNSSNSFPENSFIGKTVMM 165
           Q+S N +F   NSN ++TME  PESGTDA+L ATFR + ED  SS        IGK VM+
Sbjct: 541 QESGNSSFAFTNSNQSLTMERYPESGTDASLNATFRLILEDSTSSKISSPKDAIGKFVML 600

Query: 164 EPFDLPGLLVVQQGKNQNLAVGDTE---GSSMFRVVKGLD-KKGTVSLESVSQKGCFL 3
           EP + PG+ VVQ+G N++L + ++    GSS+F +V GLD K GTVSLES +QKGCF+
Sbjct: 601 EPINFPGMAVVQRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSLESKTQKGCFV 658


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