BLASTX nr result

ID: Coptis23_contig00017967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017967
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK27110.1| unknown [Picea sitchensis]                             161   1e-37
ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera]           155   5e-36
ref|XP_002303959.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
gb|ABK96512.1| unknown [Populus trichocarpa x Populus deltoides]      149   3e-34
ref|XP_002525563.1| protein with unknown function [Ricinus commu...   144   1e-32

>gb|ABK27110.1| unknown [Picea sitchensis]
          Length = 161

 Score =  161 bits (407), Expect = 1e-37
 Identities = 84/108 (77%), Positives = 94/108 (87%)
 Frame = +1

Query: 1   DILEGWLRDNEGKMGMKTGNVDTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQE 180
           D+L+ WLR+NE K+  KT NVD D+ F PCDALS+QMLE TA+DLAIED +YSLDKAAQE
Sbjct: 55  DVLDTWLRNNEDKI--KT-NVDIDDVFEPCDALSRQMLECTAADLAIEDILYSLDKAAQE 111

Query: 181 GSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQSQVVSMAARAPQY 324
           GSIPVD YLKN+R+LSREQFFHRATAAKVRAAQMQSQV SMAARA  Y
Sbjct: 112 GSIPVDAYLKNVRALSREQFFHRATAAKVRAAQMQSQVASMAARASPY 159


>ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera]
          Length = 425

 Score =  155 bits (393), Expect = 5e-36
 Identities = 80/111 (72%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
 Frame = +1

Query: 1   DILEGWLRDNEGKMGMKTGNVDTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQE 180
           D+LE WLR+NE K+G   GN+D D AF PCDALSKQML+ T+SDL+IED IY+LDKA QE
Sbjct: 316 DVLEAWLRENEVKLG-NMGNLDVDNAFEPCDALSKQMLDCTSSDLSIEDTIYALDKAVQE 374

Query: 181 GSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQSQVVSMAAR-APQYAM 330
           GSI  DQYLKN+R LSREQFFHRA  AK+RAAQMQ+QV SMAAR + QYAM
Sbjct: 375 GSISFDQYLKNVRLLSREQFFHRAMCAKLRAAQMQAQVASMAARVSSQYAM 425


>ref|XP_002303959.1| predicted protein [Populus trichocarpa] gi|222841391|gb|EEE78938.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  150 bits (379), Expect = 2e-34
 Identities = 73/109 (66%), Positives = 91/109 (83%)
 Frame = +1

Query: 1   DILEGWLRDNEGKMGMKTGNVDTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQE 180
           D+LE W+R+N+GK+   + ++D D AF   D LSKQMLE TA D+AIEDA+YSL+KA QE
Sbjct: 292 DVLEAWVRENKGKLKGGSEDIDVDNAFECVDVLSKQMLECTAVDMAIEDAVYSLEKAVQE 351

Query: 181 GSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQSQVVSMAARAPQYA 327
           G++P DQYL+N+R LSREQFF+RATAAKVRAAQMQ+QV  MAARAP+YA
Sbjct: 352 GAMPFDQYLRNVRLLSREQFFNRATAAKVRAAQMQAQVAGMAARAPRYA 400


>gb|ABK96512.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 403

 Score =  149 bits (377), Expect = 3e-34
 Identities = 74/109 (67%), Positives = 90/109 (82%)
 Frame = +1

Query: 1   DILEGWLRDNEGKMGMKTGNVDTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQE 180
           D+LE W+R NEGK+     ++D D+AF   D LSKQMLE TA+D+AIED +YSLDKA QE
Sbjct: 294 DVLEAWVRQNEGKVKGGMEDIDVDKAFECVDVLSKQMLECTAADMAIEDVVYSLDKAVQE 353

Query: 181 GSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQSQVVSMAARAPQYA 327
           G++P  QYL+N+R LSREQFF+RATAAKVRAAQMQ+QV SMAARAP+YA
Sbjct: 354 GAMPFVQYLRNVRLLSREQFFNRATAAKVRAAQMQAQVASMAARAPRYA 402


>ref|XP_002525563.1| protein with unknown function [Ricinus communis]
           gi|223535142|gb|EEF36822.1| protein with unknown
           function [Ricinus communis]
          Length = 419

 Score =  144 bits (363), Expect = 1e-32
 Identities = 74/110 (67%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   DILEGWLRDNEGKMGMKTG-NVDTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQ 177
           D+LE W+R+NEGK+  K   +VD D  F   DALSKQMLE T++DLAIED +YSLDKA Q
Sbjct: 309 DVLEAWVRENEGKVKAKGHVDVDVDNVFECTDALSKQMLECTSADLAIEDVVYSLDKAVQ 368

Query: 178 EGSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQSQVVSMAARAPQYA 327
           EG +P DQYL+N+R LSREQFF RATAAKVRA QMQ+QV SMAAR   YA
Sbjct: 369 EGVVPFDQYLRNVRLLSREQFFQRATAAKVRATQMQAQVASMAARLSHYA 418


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