BLASTX nr result

ID: Coptis23_contig00017962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017962
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269330.2| PREDICTED: cysteine-rich receptor-like prote...   134   9e-30
ref|XP_002270035.2| PREDICTED: cysteine-rich receptor-like prote...   132   3e-29
ref|XP_002304946.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
emb|CBI35335.3| unnamed protein product [Vitis vinifera]              130   2e-28
ref|XP_002267916.2| PREDICTED: cysteine-rich receptor-like prote...   129   4e-28

>ref|XP_002269330.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like
           [Vitis vinifera]
          Length = 665

 Score =  134 bits (337), Expect = 9e-30
 Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 9/189 (4%)
 Frame = -3

Query: 540 CTQDISRTDCGKCLNTSVFELPTCC---EGGRVIKPSCNIRFELFNFFGPEXXXXXXXXX 370
           CT D+S ++C  CL   +  +  CC   +GGR++ PSCN R+EL  F+G           
Sbjct: 200 CTPDLSGSNCSTCLENILSRITNCCLGKQGGRILVPSCNFRYELHPFYGDLAAATPPAPS 259

Query: 369 XXXXXXXNGQRKKSSKYXXXXXXXXXXXXXXXXLSMTTICFC-LCRK--KGINIVKDVA- 202
                   G++  SS+                    + +C+C +CRK  K  N  ++   
Sbjct: 260 PLSPLSPPGKKGNSSQLLIAIIVPVILSVVI----FSILCYCFICRKAKKKYNSTEEEKV 315

Query: 201 --ERSTIESLQFNFGTVRAATEDFCDSNKLGEGGFGPVYKGKLSDGQEIAVKRLSRNSGQ 28
             + +T++SLQF+FGT+ A T +F D NK+GEGGFG VYKG LS G+EIA+KRLSR+S Q
Sbjct: 316 ENDITTVQSLQFDFGTLEATTNNFSDDNKIGEGGFGDVYKGTLSSGKEIAIKRLSRSSAQ 375

Query: 27  GVEEFKNEV 1
           G  EFKNEV
Sbjct: 376 GAVEFKNEV 384


>ref|XP_002270035.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like
           [Vitis vinifera]
          Length = 666

 Score =  132 bits (332), Expect = 3e-29
 Identities = 74/188 (39%), Positives = 99/188 (52%), Gaps = 8/188 (4%)
 Frame = -3

Query: 540 CTQDISRTDCGKCLNTSVFELPTCC---EGGRVIKPSCNIRFELFNFFGPEXXXXXXXXX 370
           CT D+S ++C  CL      +  CC   +G R++ PSCN R+EL+ F+G           
Sbjct: 200 CTPDLSGSNCSTCLENIFSRITNCCLGKQGARILVPSCNFRYELYPFYGDLAAATPPAPA 259

Query: 369 XXXXXXXNGQRKKSSKYXXXXXXXXXXXXXXXXLSMTTICFCLCRKKGINIVKDVAER-- 196
                  +   KK +                   S+   CF +CRK          E+  
Sbjct: 260 PSPLSLLSPPGKKGNSSQLLIAIIVPVAVSVVIFSILCYCF-ICRKAKKKYSSTEEEKVE 318

Query: 195 ---STIESLQFNFGTVRAATEDFCDSNKLGEGGFGPVYKGKLSDGQEIAVKRLSRNSGQG 25
              +T++SLQF+FGT+ AAT +F D NK+GEGGFG VYKG LS G+EIA+KRLSR+S QG
Sbjct: 319 NDITTVQSLQFDFGTLEAATNNFSDDNKIGEGGFGDVYKGTLSSGKEIAIKRLSRSSAQG 378

Query: 24  VEEFKNEV 1
             EFKNEV
Sbjct: 379 AVEFKNEV 386


>ref|XP_002304946.1| predicted protein [Populus trichocarpa] gi|222847910|gb|EEE85457.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  130 bits (328), Expect = 1e-28
 Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 15/195 (7%)
 Frame = -3

Query: 540 CTQDISRTDCGKCLNTSVFELPTCC---EGGRVIKPSCNIRFELFNFFG------PEXXX 388
           CT DIS + C  CL+  V  +PTCC   +GG V+ PSC++RFE + F+       P    
Sbjct: 197 CTPDISPSQCRICLSGCVSFIPTCCNGKQGGNVLTPSCSMRFETYAFYTAPPSPPPPASS 256

Query: 387 XXXXXXXXXXXXXNGQRKKSSKYXXXXXXXXXXXXXXXXLSMTTICFCLCRKKGINIVKD 208
                        +G+RK SS+                   + ++C+C   KK       
Sbjct: 257 PSPPPPPATSLNPSGERKASSRTIVYISVPTSAFVVL----LFSLCYCYVHKKARKEYNA 312

Query: 207 VAERS------TIESLQFNFGTVRAATEDFCDSNKLGEGGFGPVYKGKLSDGQEIAVKRL 46
           + E +      +++SLQF  GT+ AAT +F + NK+G+GGFG VY+G L +GQ IAVKRL
Sbjct: 313 IQEGNVGDEITSVQSLQFQLGTIEAATNNFAEENKIGKGGFGDVYRGTLPNGQHIAVKRL 372

Query: 45  SRNSGQGVEEFKNEV 1
           S+NSGQG  EFKNEV
Sbjct: 373 SKNSGQGAAEFKNEV 387


>emb|CBI35335.3| unnamed protein product [Vitis vinifera]
          Length = 792

 Score =  130 bits (326), Expect = 2e-28
 Identities = 73/191 (38%), Positives = 102/191 (53%), Gaps = 11/191 (5%)
 Frame = -3

Query: 540 CTQDISRTDCGKCLNTSVFELPTCC---EGGRVIKPSCNIRFELFNFFGPEXXXXXXXXX 370
           CT D+S ++C  CL   +  +  CC   +GGR++ PSCN R+EL  F+G           
Sbjct: 200 CTPDLSGSNCSTCLENILSRITNCCLGKQGGRILVPSCNFRYELHPFYGDLAAATPPAPS 259

Query: 369 XXXXXXXNGQRKKSSKYXXXXXXXXXXXXXXXXLSMTTICFCLCR-----KKGINIVKDV 205
                   G++  SS+                      +C+C  +     KK  N  ++ 
Sbjct: 260 PLSPLSPPGKKGNSSQLLIAIIVPVAGTLIISGF----LCYCWLKRKRKAKKKYNSTEEE 315

Query: 204 A---ERSTIESLQFNFGTVRAATEDFCDSNKLGEGGFGPVYKGKLSDGQEIAVKRLSRNS 34
               + +T++SLQF+FGT+ A T +F D NK+GEGGFG VYKG LS G+EIA+KRLSR+S
Sbjct: 316 KVENDITTVQSLQFDFGTLEATTNNFSDDNKIGEGGFGDVYKGTLSSGKEIAIKRLSRSS 375

Query: 33  GQGVEEFKNEV 1
            QG  EFKNEV
Sbjct: 376 AQGAVEFKNEV 386


>ref|XP_002267916.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like
           isoform 1 [Vitis vinifera]
          Length = 663

 Score =  129 bits (323), Expect = 4e-28
 Identities = 77/191 (40%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
 Frame = -3

Query: 540 CTQDISRTDCGKCLNTSVFELPTCC---EGGRVIKPSCNIRFELFNFFGPEXXXXXXXXX 370
           CT D+S   C +CL  ++  LP CC   +G RV+ PSCN+R+EL+ F+            
Sbjct: 195 CTPDLSPDQCDRCLIGTIAILPDCCGGKQGARVLFPSCNVRYELYPFYQSVAAPPSPPPA 254

Query: 369 XXXXXXXNGQRKKSSKYXXXXXXXXXXXXXXXXLSMTTICFCL---CRKKGINIVKDVAE 199
                   G+   SSK                 +  + +C+C    C KK  + ++  AE
Sbjct: 255 RPSEPSTEGKGGISSK----TIVIIVVPTFVSVVIFSILCYCFIRRCAKKRYDTLE--AE 308

Query: 198 R-----STIESLQFNFGTVRAATEDFCDSNKLGEGGFGPVYKGKLSDGQEIAVKRLSRNS 34
                 +T +SLQF+  T++AAT +F D NK+GEGGFG VYKG LS GQEIA+KRLS++S
Sbjct: 309 NVEFNITTEQSLQFDLATIQAATNNFSDHNKIGEGGFGAVYKGTLSSGQEIAIKRLSKSS 368

Query: 33  GQGVEEFKNEV 1
           GQG  EFKNEV
Sbjct: 369 GQGAVEFKNEV 379


Top