BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017948
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   263   2e-68
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   263   2e-68
ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solan...   262   2e-68
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         261   3e-68
ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloropla...   258   5e-67

>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  263 bits (671), Expect = 2e-68
 Identities = 131/172 (76%), Positives = 148/172 (86%)
 Frame = +3

Query: 15  GWFLGLGGEKKEVMLPDIVKAGDPVLHEAAQEVPVEEIGSXXXXXXXXXXXXVLRKAPGV 194
           GWFLGLG E+K++ LP IVKAGDPVLHE A+EV  +EIGS             +RKAPGV
Sbjct: 65  GWFLGLG-EQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVQKIIDDMILTMRKAPGV 123

Query: 195 GLAAPQIGIPLKIIVLEDTKEYISYAPKEENEARDRRPFELLVILNPKLEKKNDKTALFF 374
           GLAAPQIGIPL+IIVLEDTKEYISYAPKEE +A+DRR F+LLVI+NPKL+ K++KTALFF
Sbjct: 124 GLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFF 183

Query: 375 EGCLSVDGFRAVVERHLDVEVTGFGRDGSPIRVDASGWQARILQHECDHLDG 530
           EGCLSVDGFRAVVER+LDVEV GF RDG+PI+VDASGWQARILQHECDHLDG
Sbjct: 184 EGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDG 235


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  263 bits (671), Expect = 2e-68
 Identities = 132/172 (76%), Positives = 149/172 (86%)
 Frame = +3

Query: 15  GWFLGLGGEKKEVMLPDIVKAGDPVLHEAAQEVPVEEIGSXXXXXXXXXXXXVLRKAPGV 194
           GWFLGLG E+K++ LP IVKAGDPVLHE A+EV  +EIGS             +RKAPGV
Sbjct: 65  GWFLGLG-EQKKMSLPSIVKAGDPVLHEPAREVDPKEIGSEKVXKIIDDMILTMRKAPGV 123

Query: 195 GLAAPQIGIPLKIIVLEDTKEYISYAPKEENEARDRRPFELLVILNPKLEKKNDKTALFF 374
           GLAAPQIGIPL+IIVLEDTKEYISYAPKEE +A+DRR F+LLVI+NPKL+ K++KTALFF
Sbjct: 124 GLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFF 183

Query: 375 EGCLSVDGFRAVVERHLDVEVTGFGRDGSPIRVDASGWQARILQHECDHLDG 530
           EGCLSVDGFRAVVER+LDVEV GF RDG+PI+VDASGWQARILQHECDHLDG
Sbjct: 184 EGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDG 235


>ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solanum lycopersicum]
           gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName:
           Full=Peptide deformylase 1A, chloroplastic; Short=PDF
           1A; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320968|gb|AAG33981.1|AF271258_1 peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 277

 Score =  262 bits (670), Expect = 2e-68
 Identities = 130/172 (75%), Positives = 146/172 (84%)
 Frame = +3

Query: 15  GWFLGLGGEKKEVMLPDIVKAGDPVLHEAAQEVPVEEIGSXXXXXXXXXXXXVLRKAPGV 194
           GWFLGLG +KK+ M PDIVKAGDPVLHE +Q++P+EEIGS            V+R APGV
Sbjct: 75  GWFLGLGEKKKQAM-PDIVKAGDPVLHEPSQDIPLEEIGSERIQKIIEEMVKVMRNAPGV 133

Query: 195 GLAAPQIGIPLKIIVLEDTKEYISYAPKEENEARDRRPFELLVILNPKLEKKNDKTALFF 374
           GLAAPQIGIPLKIIVLEDT EYISYAPK+E +A+DRRPF LLVI+NPKL+KK +KTALFF
Sbjct: 134 GLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFGLLVIINPKLKKKGNKTALFF 193

Query: 375 EGCLSVDGFRAVVERHLDVEVTGFGRDGSPIRVDASGWQARILQHECDHLDG 530
           EGCLSVDGFRAVVERHL+VEVTG  R+G  I+VDASGWQARILQHE DHLDG
Sbjct: 194 EGCLSVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQARILQHEYDHLDG 245


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  261 bits (668), Expect = 3e-68
 Identities = 130/172 (75%), Positives = 144/172 (83%)
 Frame = +3

Query: 15  GWFLGLGGEKKEVMLPDIVKAGDPVLHEAAQEVPVEEIGSXXXXXXXXXXXXVLRKAPGV 194
           GWFLGLG EKK+   PDIVKAGDPVLHE A+EV  EEIGS             +R APGV
Sbjct: 72  GWFLGLG-EKKKTSFPDIVKAGDPVLHEPAREVDPEEIGSERIQKIIDDMIKAMRMAPGV 130

Query: 195 GLAAPQIGIPLKIIVLEDTKEYISYAPKEENEARDRRPFELLVILNPKLEKKNDKTALFF 374
           GLAAPQIG+PL+IIVLEDTKEYI YAPKEE +A+DRRPF+LLVILNPKLEKK+++TA FF
Sbjct: 131 GLAAPQIGVPLRIIVLEDTKEYIRYAPKEETKAQDRRPFDLLVILNPKLEKKSNRTAFFF 190

Query: 375 EGCLSVDGFRAVVERHLDVEVTGFGRDGSPIRVDASGWQARILQHECDHLDG 530
           EGCLSVDGFRAVVER+LDVEVTG  R G PI+V+ASGWQARILQHECDHLDG
Sbjct: 191 EGCLSVDGFRAVVERYLDVEVTGLSRYGQPIKVNASGWQARILQHECDHLDG 242


>ref|XP_003531707.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Glycine max]
          Length = 252

 Score =  258 bits (658), Expect = 5e-67
 Identities = 128/172 (74%), Positives = 140/172 (81%)
 Frame = +3

Query: 15  GWFLGLGGEKKEVMLPDIVKAGDPVLHEAAQEVPVEEIGSXXXXXXXXXXXXVLRKAPGV 194
           GWFLGLG + K+  LPD VKAGDPVLHE AQ+V   EI S            V+RKAPGV
Sbjct: 49  GWFLGLGADSKKTNLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAPGV 108

Query: 195 GLAAPQIGIPLKIIVLEDTKEYISYAPKEENEARDRRPFELLVILNPKLEKKNDKTALFF 374
           GLAAPQIGIPL+IIVLEDTKEYISY  KEE + +DRRPF+LLVILNPKLEKK  +TALFF
Sbjct: 109 GLAAPQIGIPLRIIVLEDTKEYISYVSKEEAKTQDRRPFDLLVILNPKLEKKGKRTALFF 168

Query: 375 EGCLSVDGFRAVVERHLDVEVTGFGRDGSPIRVDASGWQARILQHECDHLDG 530
           EGCLSVDGFRAVVERHLDVEVTG  R G+PI++ ASGWQARILQHECDHLDG
Sbjct: 169 EGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKIIASGWQARILQHECDHLDG 220