BLASTX nr result
ID: Coptis23_contig00017946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00017946
(1096 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFI98561.1| RabE1 [Nicotiana benthamiana] 152 1e-35
ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [... 152 1e-35
ref|XP_002533108.1| protein with unknown function [Ricinus commu... 152 1e-35
ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group] g... 152 1e-35
gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indi... 152 1e-35
>gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 152 bits (384), Expect(2) = 1e-35
Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 2/133 (1%)
Frame = -2
Query: 495 IQLDEKPIELEVWSMPVEEEYRSLYV--YTQVLGIFLVYDITDESSFNNIKNCISEVQTY 322
I+LD K I+L++W +E +R++ Y +GI LVYD+TDESSFNNI+N I ++ +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 321 ARDNVYKILVGNKADKGESERVVSTSKGQALANEYGIKFFETSALKNLNVKQVFLSTVRD 142
A DNV KILVGNKAD ES+R V TSKGQALA+EYGIKFFETSA NLNV+QVF S RD
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARD 176
Query: 141 MKQRLLNVEEEIQ 103
+KQRL + + + +
Sbjct: 177 IKQRLADTDSKAE 189
Score = 25.0 bits (53), Expect(2) = 1e-35
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 616 IKLLLIGNYGVGKRLL 569
IKLLLIG+ GVGK L
Sbjct: 16 IKLLLIGDSGVGKSCL 31
>ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 152 bits (384), Expect(2) = 1e-35
Identities = 80/149 (53%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
Frame = -2
Query: 495 IQLDEKPIELEVWSMPVEEEYRSLYV--YTQVLGIFLVYDITDESSFNNIKNCISEVQTY 322
I+LD+K I+L++W +E +R++ Y +GI LVYD+TDESSFNNI+N I ++ +
Sbjct: 57 IELDQKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 321 ARDNVYKILVGNKADKGESERVVSTSKGQALANEYGIKFFETSALKNLNVKQVFLSTVRD 142
A DNV KIL+GNKAD ES+R V T+KGQALA+EYGIKFFETSA NLNV+QVF S RD
Sbjct: 117 ASDNVNKILIGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARD 176
Query: 141 MKQRLLNVEEEIQFSPPPNPFLYIANTPG 55
+KQRL + S P + + I T G
Sbjct: 177 IKQRLAETD-----SKPEDKTIKINKTEG 200
Score = 25.0 bits (53), Expect(2) = 1e-35
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 616 IKLLLIGNYGVGKRLL 569
IKLLLIG+ GVGK L
Sbjct: 16 IKLLLIGDSGVGKSCL 31
>ref|XP_002533108.1| protein with unknown function [Ricinus communis]
gi|223527099|gb|EEF29280.1| protein with unknown
function [Ricinus communis]
Length = 216
Score = 152 bits (383), Expect(2) = 1e-35
Identities = 77/133 (57%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
Frame = -2
Query: 495 IQLDEKPIELEVWSMPVEEEYRSLYV--YTQVLGIFLVYDITDESSFNNIKNCISEVQTY 322
I+LD K I+L++W +E +R++ Y +GI LVYD+TDESSFNNI+N I ++ +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 321 ARDNVYKILVGNKADKGESERVVSTSKGQALANEYGIKFFETSALKNLNVKQVFLSTVRD 142
A DNV KILVGNKAD ES+R V TSKGQALA+EYGIKFFETSA NLNV+QVF S RD
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARD 176
Query: 141 MKQRLLNVEEEIQ 103
+KQRL + + +
Sbjct: 177 IKQRLADTDSRTE 189
Score = 25.0 bits (53), Expect(2) = 1e-35
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 616 IKLLLIGNYGVGKRLL 569
IKLLLIG+ GVGK L
Sbjct: 16 IKLLLIGDSGVGKSCL 31
>ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive
small GTP-binding protein [Oryza sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive
small GTP-binding protein [Oryza sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa
Japonica Group] gi|215696996|dbj|BAG90990.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein
OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 152 bits (383), Expect(2) = 1e-35
Identities = 77/133 (57%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
Frame = -2
Query: 495 IQLDEKPIELEVWSMPVEEEYRSLYV--YTQVLGIFLVYDITDESSFNNIKNCISEVQTY 322
I+LD K I+L++W +E +R++ Y +GI LVYD+TDESSFNNI+N I ++ +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 321 ARDNVYKILVGNKADKGESERVVSTSKGQALANEYGIKFFETSALKNLNVKQVFLSTVRD 142
A DNV KILVGNKAD ES+R V TSKGQALA+EYGIKFFETSA NLNV+QVF S RD
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARD 176
Query: 141 MKQRLLNVEEEIQ 103
+KQRL + + +
Sbjct: 177 IKQRLAETDSKTE 189
Score = 25.0 bits (53), Expect(2) = 1e-35
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 616 IKLLLIGNYGVGKRLL 569
IKLLLIG+ GVGK L
Sbjct: 16 IKLLLIGDSGVGKSCL 31
>gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 152 bits (383), Expect(2) = 1e-35
Identities = 77/133 (57%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
Frame = -2
Query: 495 IQLDEKPIELEVWSMPVEEEYRSLYV--YTQVLGIFLVYDITDESSFNNIKNCISEVQTY 322
I+LD K I+L++W +E +R++ Y +GI LVYD+TDESSFNNI+N I ++ +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 321 ARDNVYKILVGNKADKGESERVVSTSKGQALANEYGIKFFETSALKNLNVKQVFLSTVRD 142
A DNV KILVGNKAD ES+R V TSKGQALA+EYGIKFFETSA NLNV+QVF S RD
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARD 176
Query: 141 MKQRLLNVEEEIQ 103
+KQRL + + +
Sbjct: 177 IKQRLAETDSKTE 189
Score = 25.0 bits (53), Expect(2) = 1e-35
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 616 IKLLLIGNYGVGKRLL 569
IKLLLIG+ GVGK L
Sbjct: 16 IKLLLIGDSGVGKSCL 31