BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017943
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   204   6e-51
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              204   6e-51
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...   198   3e-49
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   196   2e-48
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   192   2e-47

>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  204 bits (519), Expect = 6e-51
 Identities = 106/130 (81%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
 Frame = +1

Query: 4    KSRENKKGLHSRLSNQNFAIGSCTL-SDDSTLRVCKRFYVALILSRLVQEAPVTDVCEAF 180
            KSR N KGLH +  N+   I  C+L SD+ TLRVCKRFYVALILS+LVQE PVT+VCEAF
Sbjct: 1119 KSRNNGKGLHDKFDNR-LGITKCSLLSDEQTLRVCKRFYVALILSKLVQEVPVTEVCEAF 1177

Query: 181  KVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVSFGVRAEIVELTNISY 360
            KVARGMVQ LQENAGRFASMVSLFCERLGW+DLEGLV KFQNRVSFGVRAEIVELT I Y
Sbjct: 1178 KVARGMVQGLQENAGRFASMVSLFCERLGWNDLEGLVAKFQNRVSFGVRAEIVELTTIPY 1237

Query: 361  VKGSRARALY 390
            VKGSRARALY
Sbjct: 1238 VKGSRARALY 1247


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  204 bits (519), Expect = 6e-51
 Identities = 106/130 (81%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
 Frame = +1

Query: 4    KSRENKKGLHSRLSNQNFAIGSCTL-SDDSTLRVCKRFYVALILSRLVQEAPVTDVCEAF 180
            KSR N KGLH +  N+   I  C+L SD+ TLRVCKRFYVALILS+LVQE PVT+VCEAF
Sbjct: 1051 KSRNNGKGLHDKFDNR-LGITKCSLLSDEQTLRVCKRFYVALILSKLVQEVPVTEVCEAF 1109

Query: 181  KVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVSFGVRAEIVELTNISY 360
            KVARGMVQ LQENAGRFASMVSLFCERLGW+DLEGLV KFQNRVSFGVRAEIVELT I Y
Sbjct: 1110 KVARGMVQGLQENAGRFASMVSLFCERLGWNDLEGLVAKFQNRVSFGVRAEIVELTTIPY 1169

Query: 361  VKGSRARALY 390
            VKGSRARALY
Sbjct: 1170 VKGSRARALY 1179


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
            gi|223544402|gb|EEF45923.1| DNA polymerase theta,
            putative [Ricinus communis]
          Length = 2154

 Score =  198 bits (504), Expect = 3e-49
 Identities = 99/129 (76%), Positives = 112/129 (86%)
 Frame = +1

Query: 4    KSRENKKGLHSRLSNQNFAIGSCTLSDDSTLRVCKRFYVALILSRLVQEAPVTDVCEAFK 183
            +S +N KGL  +L NQ+    +  +SD+ +LRVC+RFYVALILSRLVQE PV +VCEAFK
Sbjct: 1099 RSTDNMKGLPGKLENQHGKSKNSIISDEQSLRVCRRFYVALILSRLVQETPVAEVCEAFK 1158

Query: 184  VARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVSFGVRAEIVELTNISYV 363
            VARGMVQALQEN+GRFASMVSLFCERLGWHD+EGLV KFQ+RVSFGVRAEIVELT I YV
Sbjct: 1159 VARGMVQALQENSGRFASMVSLFCERLGWHDVEGLVSKFQSRVSFGVRAEIVELTTIPYV 1218

Query: 364  KGSRARALY 390
            KGSRARALY
Sbjct: 1219 KGSRARALY 1227


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  196 bits (498), Expect = 2e-48
 Identities = 102/130 (78%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
 Frame = +1

Query: 4    KSRENKKGLHSRLSNQNFAIGSCTLS-DDSTLRVCKRFYVALILSRLVQEAPVTDVCEAF 180
            KSR+N + LH++  NQ   I S T + DD TLRVC+RFYVALILS LVQE PV +VCEAF
Sbjct: 1082 KSRDNTRSLHNQRRNQ-LGISSATANYDDQTLRVCRRFYVALILSLLVQEIPVGEVCEAF 1140

Query: 181  KVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVSFGVRAEIVELTNISY 360
            KVARGMVQALQENAGRFASMV++FCERLGWHDLEGLV KFQNRVSFGVRAEIVELT I Y
Sbjct: 1141 KVARGMVQALQENAGRFASMVAVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPY 1200

Query: 361  VKGSRARALY 390
            VKGSRAR+LY
Sbjct: 1201 VKGSRARSLY 1210


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  192 bits (489), Expect = 2e-47
 Identities = 97/129 (75%), Positives = 110/129 (85%)
 Frame = +1

Query: 4    KSRENKKGLHSRLSNQNFAIGSCTLSDDSTLRVCKRFYVALILSRLVQEAPVTDVCEAFK 183
            K ++ KK L     N++ +     LSD+  LRVCKRF+VALILS+LVQEA VT+VCEAFK
Sbjct: 1109 KPQDVKKNLRGEYDNRHGSTSMKMLSDEQMLRVCKRFFVALILSKLVQEASVTEVCEAFK 1168

Query: 184  VARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVSFGVRAEIVELTNISYV 363
            VARGMVQALQENAGRF+SMVS+FCERLGWHDLEGLV KFQNRVSFGVRAEIVELT+I Y+
Sbjct: 1169 VARGMVQALQENAGRFSSMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTSIPYI 1228

Query: 364  KGSRARALY 390
            KGSRARALY
Sbjct: 1229 KGSRARALY 1237