BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017924
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase ac...    86   4e-15
emb|CAN61807.1| hypothetical protein VITISV_014294 [Vitis vinifera]    86   4e-15
ref|XP_003562554.1| PREDICTED: mitochondrial ubiquitin ligase ac...    82   4e-14
ref|XP_003562553.1| PREDICTED: mitochondrial ubiquitin ligase ac...    82   4e-14
ref|XP_002463293.1| hypothetical protein SORBIDRAFT_02g041380 [S...    80   2e-13

>ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|296086688|emb|CBI32323.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 51/77 (66%), Positives = 55/77 (71%), Gaps = 14/77 (18%)
 Frame = +3

Query: 342 YLLGRSSGKYYVS-------------AQILDTACKVLPLVVTVSGRVDSDAPIIKCD-SG 479
           YLLGRSSG+   +              Q+LDTACKVLPLVVTVSGRV SD P IKC+ SG
Sbjct: 17  YLLGRSSGRDAEALKSVTRVQQLKDLVQLLDTACKVLPLVVTVSGRVGSDTP-IKCEYSG 75

Query: 480 LRGVIVEEMAEQHFLKH 530
           LRGVIVEE AEQHFLKH
Sbjct: 76  LRGVIVEETAEQHFLKH 92


>emb|CAN61807.1| hypothetical protein VITISV_014294 [Vitis vinifera]
          Length = 202

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 51/77 (66%), Positives = 55/77 (71%), Gaps = 14/77 (18%)
 Frame = +3

Query: 342 YLLGRSSGKYYVS-------------AQILDTACKVLPLVVTVSGRVDSDAPIIKCD-SG 479
           YLLGRSSG+   +              Q+LDTACKVLPLVVTVSGRV SD P IKC+ SG
Sbjct: 17  YLLGRSSGRDAEALKSVTRVQQLKDLVQLLDTACKVLPLVVTVSGRVGSDTP-IKCEYSG 75

Query: 480 LRGVIVEEMAEQHFLKH 530
           LRGVIVEE AEQHFLKH
Sbjct: 76  LRGVIVEETAEQHFLKH 92


>ref|XP_003562554.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           isoform 2 [Brachypodium distachyon]
          Length = 331

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 48/76 (63%), Positives = 51/76 (67%), Gaps = 13/76 (17%)
 Frame = +3

Query: 342 YLLGRSSGK-------------YYVSAQILDTACKVLPLVVTVSGRVDSDAPIIKCDSGL 482
           YLLGRSSG+                 A ILDTA KVLPLVV VSGRV SD P+I   SG+
Sbjct: 18  YLLGRSSGRDAEVLRSVTRTGSLKDLAAILDTASKVLPLVVAVSGRVSSDTPLICQQSGM 77

Query: 483 RGVIVEEMAEQHFLKH 530
           RGVIVEEMAEQHFLKH
Sbjct: 78  RGVIVEEMAEQHFLKH 93


>ref|XP_003562553.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           isoform 1 [Brachypodium distachyon]
          Length = 343

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 48/76 (63%), Positives = 51/76 (67%), Gaps = 13/76 (17%)
 Frame = +3

Query: 342 YLLGRSSGK-------------YYVSAQILDTACKVLPLVVTVSGRVDSDAPIIKCDSGL 482
           YLLGRSSG+                 A ILDTA KVLPLVV VSGRV SD P+I   SG+
Sbjct: 18  YLLGRSSGRDAEVLRSVTRTGSLKDLAAILDTASKVLPLVVAVSGRVSSDTPLICQQSGM 77

Query: 483 RGVIVEEMAEQHFLKH 530
           RGVIVEEMAEQHFLKH
Sbjct: 78  RGVIVEEMAEQHFLKH 93


>ref|XP_002463293.1| hypothetical protein SORBIDRAFT_02g041380 [Sorghum bicolor]
           gi|241926670|gb|EER99814.1| hypothetical protein
           SORBIDRAFT_02g041380 [Sorghum bicolor]
          Length = 343

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/76 (61%), Positives = 50/76 (65%), Gaps = 13/76 (17%)
 Frame = +3

Query: 342 YLLGRSSGK-------------YYVSAQILDTACKVLPLVVTVSGRVDSDAPIIKCDSGL 482
           YLLGRSSG+                 A ILDTA KVLPLVV VSGRV SD P+I   SG+
Sbjct: 18  YLLGRSSGRDAEVLRSVARAGSMKDLAAILDTASKVLPLVVAVSGRVSSDTPLICQQSGM 77

Query: 483 RGVIVEEMAEQHFLKH 530
           RGVIVEE AEQHFLKH
Sbjct: 78  RGVIVEETAEQHFLKH 93