BLASTX nr result

ID: Coptis23_contig00017920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017920
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [S...   145   4e-33
ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resista...   141   5e-32
ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_002961699.1| ATP-binding cassette transporter [Selaginell...    93   2e-17
ref|XP_002964767.1| hypothetical protein SELMODRAFT_406260 [Sela...    91   8e-17

>ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [Sorghum bicolor]
            gi|241944069|gb|EES17214.1| hypothetical protein
            SORBIDRAFT_08g018460 [Sorghum bicolor]
          Length = 1532

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/114 (60%), Positives = 85/114 (74%)
 Frame = -2

Query: 344  GSKVSRNALLKCLSGRTPIDGKLTGKLHVNGFKLCTTYSRLIGYVEKVDAHPPYLSVRES 165
            G+  S   LLKCLSGRTP+ G  TG + VNG K C  +SR +GY E++DAH PYL++RES
Sbjct: 963  GANGSVATLLKCLSGRTPLGGSFTGDIQVNGTKPCADFSRRVGYAERLDAHQPYLTIRES 1022

Query: 164  LQFSAGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLVGSLHDATEETFKIAK 3
            L+FSA LRL  S+    RH+HVELVLDQLGL  YAN+LVGSL D T +TF++AK
Sbjct: 1023 LEFSANLRLTNSISKARRHMHVELVLDQLGLQYYANNLVGSLRDGTGKTFEVAK 1076


>ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resistance protein 7-like [Vitis
            vinifera]
          Length = 1538

 Score =  141 bits (356), Expect = 5e-32
 Identities = 74/114 (64%), Positives = 89/114 (78%)
 Frame = -2

Query: 344  GSKVSRNALLKCLSGRTPIDGKLTGKLHVNGFKLCTTYSRLIGYVEKVDAHPPYLSVRES 165
            GS+ S+  LLKCL+GR P++G LTG L+ NG     T+SRLIGYVEK+DAH PYLSVRE+
Sbjct: 975  GSRTSKATLLKCLAGRKPLNGCLTGNLNANGIS-AGTFSRLIGYVEKLDAHQPYLSVRET 1033

Query: 164  LQFSAGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLVGSLHDATEETFKIAK 3
            LQFSA LRL +++   NR IHVELVL+QLGLM Y+N LV SL DAT  TF+IAK
Sbjct: 1034 LQFSAALRLGQAISLTNRCIHVELVLNQLGLMPYSNQLVSSLCDATGRTFEIAK 1087


>ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|222857845|gb|EEE95392.1|
            predicted protein [Populus trichocarpa]
          Length = 1605

 Score =  135 bits (339), Expect = 5e-30
 Identities = 70/114 (61%), Positives = 86/114 (75%)
 Frame = -2

Query: 344  GSKVSRNALLKCLSGRTPIDGKLTGKLHVNGFKLCTTYSRLIGYVEKVDAHPPYLSVRES 165
            G++ ++  LLKCL+GR P     TG L  NGF+    + RLIGYVEK+DAH PYLS+RES
Sbjct: 1045 GTRTNKATLLKCLAGRVPC----TGNLQANGFRPGAPFCRLIGYVEKLDAHQPYLSIRES 1100

Query: 164  LQFSAGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLVGSLHDATEETFKIAK 3
            LQFSA LRL + V SM R+IHVELVL QLGL+ Y+N LVGSL D+T +TF+IAK
Sbjct: 1101 LQFSAALRLGKEVGSMMRNIHVELVLSQLGLLPYSNQLVGSLCDSTGKTFEIAK 1154


>ref|XP_002961699.1| ATP-binding cassette transporter [Selaginella moellendorffii]
            gi|300170358|gb|EFJ36959.1| ATP-binding cassette
            transporter [Selaginella moellendorffii]
          Length = 1583

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/113 (48%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
 Frame = -2

Query: 329  RNALLKCLSGRT--PIDGKL-TGKLHVNGFKLCT-TYSRLIGYVEKVDAHPPYLSVRESL 162
            ++ LL+ L+GRT     G+L +G++ VNGFKL + T+ RL G+VE+VDAH P+L+V+ESL
Sbjct: 1025 KSTLLRVLAGRTLPSSSGELISGEVLVNGFKLSSNTFRRLSGFVERVDAHQPFLTVKESL 1084

Query: 161  QFSAGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLVGSLHDATEETFKIAK 3
             FSAGLR   S     R  HVELVL+ +GL+   + LVGSL  +  + F++AK
Sbjct: 1085 DFSAGLRFGGSTTPGRRAFHVELVLELMGLVGVKDQLVGSLKFSNGKIFELAK 1137


>ref|XP_002964767.1| hypothetical protein SELMODRAFT_406260 [Selaginella moellendorffii]
            gi|300167000|gb|EFJ33605.1| hypothetical protein
            SELMODRAFT_406260 [Selaginella moellendorffii]
          Length = 1600

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 4/113 (3%)
 Frame = -2

Query: 329  RNALLKCLSGRT--PIDGKL-TGKLHVNGFKLCT-TYSRLIGYVEKVDAHPPYLSVRESL 162
            ++ LL+ L+GRT     G+L +G++ VNGF L + T+ RL G+VE+VDAH P+L+V+ESL
Sbjct: 1025 KSTLLRVLAGRTLPSSSGELISGEVLVNGFNLSSNTFRRLSGFVERVDAHQPFLTVKESL 1084

Query: 161  QFSAGLRLDRSVDSMNRHIHVELVLDQLGLMLYANHLVGSLHDATEETFKIAK 3
             FSAGLR   S     R  HVELVL+ +GL+   + LVGSL  +  + F++AK
Sbjct: 1085 DFSAGLRFGGSTTPGRRAFHVELVLELMGLVGVKDQLVGSLKFSNGKIFELAK 1137


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