BLASTX nr result
ID: Coptis23_contig00017918
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00017918 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional... 117 7e-25 ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional... 113 1e-23 gb|AFK40203.1| unknown [Lotus japonicus] 108 6e-22 ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycin... 108 6e-22 ref|XP_002309936.1| predicted protein [Populus trichocarpa] gi|2... 108 6e-22 >ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI [Vitis vinifera] gi|147846591|emb|CAN79502.1| hypothetical protein VITISV_022689 [Vitis vinifera] gi|296082597|emb|CBI21602.3| unnamed protein product [Vitis vinifera] Length = 103 Score = 117 bits (294), Expect = 7e-25 Identities = 52/72 (72%), Positives = 64/72 (88%) Frame = +3 Query: 6 ADDSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQWQILRD 185 +DD D+II CEIS+NRRV+VR+WQGK +DIREFYVKDG +PGKKGISL+MDQW +LRD Sbjct: 31 SDDPDNIIVCEISRNRRVSVRNWQGKVQVDIREFYVKDGKQMPGKKGISLTMDQWNVLRD 90 Query: 186 HMDAIDEAVAEN 221 H++ IDEAVA+N Sbjct: 91 HVNEIDEAVADN 102 >ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like [Cucumis sativus] gi|449527765|ref|XP_004170880.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like [Cucumis sativus] Length = 104 Score = 113 bits (283), Expect = 1e-23 Identities = 49/73 (67%), Positives = 64/73 (87%) Frame = +3 Query: 6 ADDSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQWQILRD 185 +DD+D+I+ CE+SKNRRV VR+WQGK V+DIREFYVKDG +PGKKGISLS+DQW +L + Sbjct: 29 SDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLN 88 Query: 186 HMDAIDEAVAENT 224 H++ ID+AV EN+ Sbjct: 89 HVEEIDKAVNENS 101 >gb|AFK40203.1| unknown [Lotus japonicus] Length = 106 Score = 108 bits (269), Expect = 6e-22 Identities = 47/71 (66%), Positives = 61/71 (85%) Frame = +3 Query: 9 DDSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQWQILRDH 188 +D D I+ CEISKNRRV+VR+WQG+ V+DI EFYVKDG +PGKKGISL+MDQW +LR+H Sbjct: 35 EDPDSIVVCEISKNRRVSVRNWQGRIVVDILEFYVKDGKQMPGKKGISLTMDQWNVLRNH 94 Query: 189 MDAIDEAVAEN 221 ++ ID+AV E+ Sbjct: 95 IEEIDKAVNES 105 >ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycine max] gi|255637253|gb|ACU18957.1| unknown [Glycine max] Length = 105 Score = 108 bits (269), Expect = 6e-22 Identities = 47/72 (65%), Positives = 60/72 (83%) Frame = +3 Query: 9 DDSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQWQILRDH 188 DD D + CEISKNRRV VR+W+G ++DIREFYVKDG LPG+KGISL+MDQW +LR+H Sbjct: 34 DDPDSVTICEISKNRRVAVRNWKGSIMVDIREFYVKDGKQLPGRKGISLTMDQWNVLRNH 93 Query: 189 MDAIDEAVAENT 224 ++ ID+AV EN+ Sbjct: 94 VEEIDKAVNENS 105 >ref|XP_002309936.1| predicted protein [Populus trichocarpa] gi|222852839|gb|EEE90386.1| predicted protein [Populus trichocarpa] Length = 120 Score = 108 bits (269), Expect = 6e-22 Identities = 46/73 (63%), Positives = 63/73 (86%) Frame = +3 Query: 3 AADDSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQWQILR 182 ++D+SD+I+ CEI +NRRVTVR+W+GK +DIREFY KDGN LPGKKGI+LS+DQW +LR Sbjct: 48 SSDNSDEIVVCEIGRNRRVTVRNWRGKINVDIREFYPKDGNLLPGKKGITLSLDQWNMLR 107 Query: 183 DHMDAIDEAVAEN 221 DH++ ID+A+ + Sbjct: 108 DHVEEIDKALGHS 120