BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017913
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39452.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   126   2e-27
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   122   3e-26

>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = -2

Query: 221 YNPMLEYLCAKGKTKKAERVFRQLLKRGRQDPPAFRTLIMGHCKEGTFEAGFDLLVLMLR 42
           YNPM EYLC+ GKTKKAERVFRQL+KRG QDPP+++TLI+GHC+EGT EAGFDLLVLMLR
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLR 518

Query: 41  RDFVPDVEIY 12
           RDFVPD E Y
Sbjct: 519 RDFVPDAETY 528


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = -2

Query: 221 YNPMLEYLCAKGKTKKAERVFRQLLKRGRQDPPAFRTLIMGHCKEGTFEAGFDLLVLMLR 42
           YNPM EYLC+ GKTKKAERVFRQL+KRG QDPP+++TLI+GHC+EGT EAGFDLLVLMLR
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLR 518

Query: 41  RDFVPDVEIY 12
           RDFVPD E Y
Sbjct: 519 RDFVPDAETY 528


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = -2

Query: 221 YNPMLEYLCAKGKTKKAERVFRQLLKRGRQDPPAFRTLIMGHCKEGTFEAGFDLLVLMLR 42
           YNPM EYLC+ GKTKKAERVFRQL+KRG QDPP+++TLI+GHC+EGT EAGFDLLVLMLR
Sbjct: 530 YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLR 589

Query: 41  RDFVPDVEIY 12
           RDFVPD E Y
Sbjct: 590 RDFVPDAETY 599


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  123 bits (308), Expect = 2e-26
 Identities = 53/73 (72%), Positives = 66/73 (90%)
 Frame = -2

Query: 221 YNPMLEYLCAKGKTKKAERVFRQLLKRGRQDPPAFRTLIMGHCKEGTFEAGFDLLVLMLR 42
           YNP+ +YLC  GKTKKAE+ FRQL++RG QDPP+++TLIMGHCKEGTFE+G++LLVLMLR
Sbjct: 443 YNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLR 502

Query: 41  RDFVPDVEIYESL 3
           +DF+PD E YESL
Sbjct: 503 KDFLPDFETYESL 515


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  122 bits (306), Expect = 3e-26
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = -2

Query: 221 YNPMLEYLCAKGKTKKAERVFRQLLKRGRQDPPAFRTLIMGHCKEGTFEAGFDLLVLMLR 42
           YNP+ +YLC  GKTKKAE+ FRQL++RG QDPP+++TLIMGHCKEGTFE+G++LLVLMLR
Sbjct: 443 YNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLR 502

Query: 41  RDFVPDVEIYESL 3
           +DF PD E YESL
Sbjct: 503 KDFXPDFETYESL 515