BLASTX nr result

ID: Coptis23_contig00017903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017903
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151890.1| PREDICTED: NEDD8-activating enzyme E1 regula...   189   3e-46
ref|XP_002267415.1| PREDICTED: NEDD8-activating enzyme E1 regula...   188   3e-46
ref|XP_002302878.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
gb|AFK44465.1| unknown [Lotus japonicus]                              180   9e-44
gb|AFK34906.1| unknown [Medicago truncatula]                          178   5e-43

>ref|XP_004151890.1| PREDICTED: NEDD8-activating enzyme E1 regulatory subunit-like
           [Cucumis sativus] gi|449523113|ref|XP_004168569.1|
           PREDICTED: NEDD8-activating enzyme E1 regulatory
           subunit-like [Cucumis sativus]
          Length = 523

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/127 (74%), Positives = 104/127 (81%)
 Frame = -1

Query: 381 KRFAESIDLNSTDPVVHKHTPYVVILVKMAEEWASSHGGRLPSTREEKREFKDLLKGKMI 202
           +RFAE+IDLN+ DPV HKHTPYVVILVKMAEEWA SHGG LPS+REEK+ FKDLLK KMI
Sbjct: 188 RRFAETIDLNAPDPVAHKHTPYVVILVKMAEEWAKSHGGSLPSSREEKKAFKDLLKAKMI 247

Query: 201 GLDEDNYKEAIEASFKVSASRGISSGLCQILNXXXXXXXXXXXDFWVMVAALKEFIANEG 22
            +DEDNYKEAIEASFKV A RGISS L QI+N           DFW++VAALKEFI NEG
Sbjct: 248 AMDEDNYKEAIEASFKVFAPRGISSDLKQIVNDSCAEVDSNSSDFWILVAALKEFIVNEG 307

Query: 21  GGEAPLE 1
           GGEAP+E
Sbjct: 308 GGEAPME 314


>ref|XP_002267415.1| PREDICTED: NEDD8-activating enzyme E1 regulatory subunit [Vitis
           vinifera] gi|297739147|emb|CBI28798.3| unnamed protein
           product [Vitis vinifera]
          Length = 523

 Score =  188 bits (478), Expect = 3e-46
 Identities = 94/125 (75%), Positives = 104/125 (83%)
 Frame = -1

Query: 375 FAESIDLNSTDPVVHKHTPYVVILVKMAEEWASSHGGRLPSTREEKREFKDLLKGKMIGL 196
           FAE+IDLN +DPVVHKHTPYVVILVKMAE+W  SH G+LPSTREEK+EFKDLLK KMI +
Sbjct: 190 FAETIDLNVSDPVVHKHTPYVVILVKMAEQWTKSHDGKLPSTREEKKEFKDLLKSKMIAM 249

Query: 195 DEDNYKEAIEASFKVSASRGISSGLCQILNXXXXXXXXXXXDFWVMVAALKEFIANEGGG 16
           DEDNYKEAIEASFKV A RGISS L QI++           +FWVMVA+LKEFIANEGGG
Sbjct: 250 DEDNYKEAIEASFKVFAPRGISSNLQQIIDDSRADVDSSSSNFWVMVASLKEFIANEGGG 309

Query: 15  EAPLE 1
           EAPLE
Sbjct: 310 EAPLE 314


>ref|XP_002302878.1| predicted protein [Populus trichocarpa] gi|222844604|gb|EEE82151.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  186 bits (473), Expect = 1e-45
 Identities = 94/127 (74%), Positives = 102/127 (80%)
 Frame = -1

Query: 381 KRFAESIDLNSTDPVVHKHTPYVVILVKMAEEWASSHGGRLPSTREEKREFKDLLKGKMI 202
           KRFAESIDL   DPV HKHTPYVVILVKMAEEWA +HGG LPSTR+EK+EFK+LLK  M+
Sbjct: 188 KRFAESIDLKVADPVAHKHTPYVVILVKMAEEWAKAHGGALPSTRDEKKEFKELLKAGMV 247

Query: 201 GLDEDNYKEAIEASFKVSASRGISSGLCQILNXXXXXXXXXXXDFWVMVAALKEFIANEG 22
            +DEDNYKEAIEASFKV A RGISS L QI++           DFWVMVAALKEFI NEG
Sbjct: 248 AIDEDNYKEAIEASFKVFAPRGISSDLLQIIHDSCSEVDSNSSDFWVMVAALKEFIVNEG 307

Query: 21  GGEAPLE 1
           GGEAPLE
Sbjct: 308 GGEAPLE 314


>gb|AFK44465.1| unknown [Lotus japonicus]
          Length = 523

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/127 (72%), Positives = 98/127 (77%)
 Frame = -1

Query: 381 KRFAESIDLNSTDPVVHKHTPYVVILVKMAEEWASSHGGRLPSTREEKREFKDLLKGKMI 202
           KRFAE  DLN  DPV HKH PYVVILVKMA+EWA SHGGRLPSTREEK+EFK+LLK  M+
Sbjct: 188 KRFAEGFDLNLQDPVAHKHIPYVVILVKMADEWAKSHGGRLPSTREEKKEFKELLKAGMV 247

Query: 201 GLDEDNYKEAIEASFKVSASRGISSGLCQILNXXXXXXXXXXXDFWVMVAALKEFIANEG 22
             DEDNYKEAIE+SFKV A RGIS  L QILN           DFWVMVAALK+FI NEG
Sbjct: 248 AQDEDNYKEAIESSFKVFAPRGISLELQQILNDSSAEVDSNSSDFWVMVAALKDFITNEG 307

Query: 21  GGEAPLE 1
           GGE PLE
Sbjct: 308 GGETPLE 314


>gb|AFK34906.1| unknown [Medicago truncatula]
          Length = 523

 Score =  178 bits (451), Expect = 5e-43
 Identities = 90/127 (70%), Positives = 100/127 (78%)
 Frame = -1

Query: 381 KRFAESIDLNSTDPVVHKHTPYVVILVKMAEEWASSHGGRLPSTREEKREFKDLLKGKMI 202
           KRFAE  +LN  DPV HKH PYVVILVKMA+EWA SHGGRLPSTREEK+EFK+LLK  M+
Sbjct: 188 KRFAEGFELNVHDPVAHKHIPYVVILVKMADEWAKSHGGRLPSTREEKKEFKELLKAGMV 247

Query: 201 GLDEDNYKEAIEASFKVSASRGISSGLCQILNXXXXXXXXXXXDFWVMVAALKEFIANEG 22
             DEDNYKEA+E+SFKV A RGISS L  ILN           DFWV+VAALK+F+ANEG
Sbjct: 248 APDEDNYKEAMESSFKVFAPRGISSELQLILNDSSVEVDSSSSDFWVLVAALKDFVANEG 307

Query: 21  GGEAPLE 1
           GGEAPLE
Sbjct: 308 GGEAPLE 314


Top