BLASTX nr result

ID: Coptis23_contig00017902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017902
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267415.1| PREDICTED: NEDD8-activating enzyme E1 regula...   192   2e-47
ref|XP_004151890.1| PREDICTED: NEDD8-activating enzyme E1 regula...   188   3e-46
gb|AFK34906.1| unknown [Medicago truncatula]                          188   3e-46
ref|XP_002320462.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|NP_001030970.1| amyloid beta precursor protein binding prote...   185   4e-45

>ref|XP_002267415.1| PREDICTED: NEDD8-activating enzyme E1 regulatory subunit [Vitis
           vinifera] gi|297739147|emb|CBI28798.3| unnamed protein
           product [Vitis vinifera]
          Length = 523

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/117 (81%), Positives = 104/117 (88%)
 Frame = -3

Query: 351 IANEGGGEAPLEGSIPDMTSLTEYYINLQKIYQAKAEADFLAVEQRVRNILKRIGREPYS 172
           IANEGGGEAPLEGSIPDMTS TE+Y+NLQKIYQAKAEADFL +EQRVRNILK+IGR+P S
Sbjct: 303 IANEGGGEAPLEGSIPDMTSSTEHYVNLQKIYQAKAEADFLVIEQRVRNILKKIGRDPDS 362

Query: 171 IPKTTIKSFCRNARKLIVCRYRPIEEELNSPVLSELQKYLTDKDYSAAVGFYILLRA 1
           I K  IKSF +NARKL VCRYR +EEE NSP+  ELQKYLTD+DYS AVGFYILLRA
Sbjct: 363 ISKANIKSFSKNARKLTVCRYRLLEEEFNSPIQPELQKYLTDEDYSVAVGFYILLRA 419


>ref|XP_004151890.1| PREDICTED: NEDD8-activating enzyme E1 regulatory subunit-like
           [Cucumis sativus] gi|449523113|ref|XP_004168569.1|
           PREDICTED: NEDD8-activating enzyme E1 regulatory
           subunit-like [Cucumis sativus]
          Length = 523

 Score =  188 bits (478), Expect = 3e-46
 Identities = 88/117 (75%), Positives = 104/117 (88%)
 Frame = -3

Query: 351 IANEGGGEAPLEGSIPDMTSLTEYYINLQKIYQAKAEADFLAVEQRVRNILKRIGREPYS 172
           I NEGGGEAP+EGSIPDMTS TE+Y+NLQ IYQAKAEADF  +E+R RNILK+IGR+P S
Sbjct: 303 IVNEGGGEAPMEGSIPDMTSSTEHYVNLQNIYQAKAEADFKIIEERARNILKKIGRDPNS 362

Query: 171 IPKTTIKSFCRNARKLIVCRYRPIEEELNSPVLSELQKYLTDKDYSAAVGFYILLRA 1
           I KTT+KSFC+NARKL VCRYR +E+E NSP++ ELQKYLTD+D+S AVGFY+LLRA
Sbjct: 363 ISKTTVKSFCKNARKLRVCRYRSLEDEFNSPIVPELQKYLTDEDFSVAVGFYLLLRA 419


>gb|AFK34906.1| unknown [Medicago truncatula]
          Length = 523

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/117 (78%), Positives = 103/117 (88%)
 Frame = -3

Query: 351 IANEGGGEAPLEGSIPDMTSLTEYYINLQKIYQAKAEADFLAVEQRVRNILKRIGREPYS 172
           +ANEGGGEAPLEGSIPDMTS TE Y+NLQ IYQAKAEADFLA+E+  RN LK+IG +P S
Sbjct: 303 VANEGGGEAPLEGSIPDMTSSTEQYVNLQNIYQAKAEADFLAIERMARNTLKKIGGDPNS 362

Query: 171 IPKTTIKSFCRNARKLIVCRYRPIEEELNSPVLSELQKYLTDKDYSAAVGFYILLRA 1
           IP+ TIKSFC+NARKL VCRYRPIE+E NSP LSELQKYLTD+D+S AVG YILLRA
Sbjct: 363 IPRATIKSFCKNARKLKVCRYRPIEDEFNSPNLSELQKYLTDEDHSFAVGIYILLRA 419


>ref|XP_002320462.1| predicted protein [Populus trichocarpa] gi|222861235|gb|EEE98777.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/117 (76%), Positives = 106/117 (90%)
 Frame = -3

Query: 351 IANEGGGEAPLEGSIPDMTSLTEYYINLQKIYQAKAEADFLAVEQRVRNILKRIGREPYS 172
           IANEGG EAPLEGSIPDMTS TE Y+NLQKIYQAKAEADFLA++QRV++ILKR+GR+P S
Sbjct: 301 IANEGGEEAPLEGSIPDMTSSTELYVNLQKIYQAKAEADFLAIQQRVKSILKRMGRDPDS 360

Query: 171 IPKTTIKSFCRNARKLIVCRYRPIEEELNSPVLSELQKYLTDKDYSAAVGFYILLRA 1
           I K  IKSFC+NARKL +CRYRPIE+E N+P ++ELQKYLTD++YS A+GFYILLR+
Sbjct: 361 ISKEMIKSFCKNARKLKICRYRPIEDEFNNPAVTELQKYLTDEEYSVAMGFYILLRS 417


>ref|NP_001030970.1| amyloid beta precursor protein binding protein 1 [Arabidopsis
           thaliana] gi|332189680|gb|AEE27801.1| amyloid beta
           precursor protein binding protein 1 [Arabidopsis
           thaliana]
          Length = 422

 Score =  185 bits (469), Expect = 4e-45
 Identities = 87/117 (74%), Positives = 104/117 (88%)
 Frame = -3

Query: 351 IANEGGGEAPLEGSIPDMTSLTEYYINLQKIYQAKAEADFLAVEQRVRNILKRIGREPYS 172
           + NEGGGEAPLEGSIPDMTS TE+YINLQKIY AKAEADFL +E+RV+NILK+IGR+P S
Sbjct: 216 VLNEGGGEAPLEGSIPDMTSSTEHYINLQKIYLAKAEADFLVIEERVKNILKKIGRDPSS 275

Query: 171 IPKTTIKSFCRNARKLIVCRYRPIEEELNSPVLSELQKYLTDKDYSAAVGFYILLRA 1
           IPK TIKSFC+NARKL +CRYR +E+E  +P ++E+QKYL D+DYS A+GFYILLRA
Sbjct: 276 IPKPTIKSFCKNARKLKLCRYRMVEDEFRNPSVTEIQKYLADEDYSGAMGFYILLRA 332


Top