BLASTX nr result

ID: Coptis23_contig00017896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017896
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527314.1| zinc finger protein, putative [Ricinus commu...   214   3e-53
emb|CBI21086.3| unnamed protein product [Vitis vinifera]              209   7e-52
ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis...   209   7e-52
emb|CAN74885.1| hypothetical protein VITISV_000223 [Vitis vinifera]   206   6e-51
ref|XP_002272545.1| PREDICTED: zinc finger protein 1-like [Vitis...   206   8e-51

>ref|XP_002527314.1| zinc finger protein, putative [Ricinus communis]
           gi|223533314|gb|EEF35066.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 280

 Score =  214 bits (545), Expect = 3e-53
 Identities = 120/197 (60%), Positives = 138/197 (70%), Gaps = 5/197 (2%)
 Frame = +1

Query: 307 ELNLIDCFNLGPSQKSL--DALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTI 480
           ELNLID F+LGPSQKSL  +     E+EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+
Sbjct: 77  ELNLIDTFDLGPSQKSLSDNPHQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 136

Query: 481 AKRGQRLGAAAAAFGYNSXXXXXXXXXXXXXXXXSSLASLPLHGSCNRSLGIQVHSMIQK 660
           AKRGQR+ AA+ A G++                 SS+ASLPLHGS NRSLGIQVHSMI K
Sbjct: 137 AKRGQRISAASFALGHH---------HHSHLNRYSSMASLPLHGSLNRSLGIQVHSMIHK 187

Query: 661 PFFVPSS---SSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQPSRSGAARFD 831
           P F+ SS   SSN  LYG  GWSR P + QP +GRLA+ E +  G     PS +G ARF+
Sbjct: 188 PTFIQSSILGSSN--LYGQNGWSRQPFDQQPAVGRLAS-ESFHMG----SPSGNGVARFE 240

Query: 832 TARKLGPNDEGIGGYRW 882
           +ARK  P  EGIGGY W
Sbjct: 241 SARKFSPVREGIGGYWW 257


>emb|CBI21086.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  209 bits (533), Expect = 7e-52
 Identities = 117/209 (55%), Positives = 135/209 (64%), Gaps = 6/209 (2%)
 Frame = +1

Query: 307 ELNLIDCFNLGPSQKSLDALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 486
           ELNLIDC N   SQ S +     ++EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 44  ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 103

Query: 487 RGQRLG----AAAAAFGYNSXXXXXXXXXXXXXXXXSSLASLPLHGSCNRSLGIQVHSMI 654
           RGQRLG    AAA AFG+                  SS+ASLPLHG+ NRSLGIQVHSMI
Sbjct: 104 RGQRLGAPMVAAATAFGH----------PYFHHQHYSSMASLPLHGAYNRSLGIQVHSMI 153

Query: 655 QKPFFVPSSSSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQPSRSGAARFDT 834
            KP     SS +  LYGH  WSRPPI+ QP +GRL A+E    G++    SR G  RFDT
Sbjct: 154 HKPSLTTPSSGSGNLYGHRSWSRPPIDQQPAVGRL-AVENCHEGVTAGPLSRGGIGRFDT 212

Query: 835 ARKL--GPNDEGIGGYRWAATGSNQPKNN 915
            R +     +EGIGG+ W  TG  + K N
Sbjct: 213 VRMMINSQANEGIGGFCW--TGGGRLKTN 239


>ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis vinifera]
          Length = 286

 Score =  209 bits (533), Expect = 7e-52
 Identities = 117/209 (55%), Positives = 135/209 (64%), Gaps = 6/209 (2%)
 Frame = +1

Query: 307 ELNLIDCFNLGPSQKSLDALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 486
           ELNLIDC N   SQ S +     ++EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 78  ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 137

Query: 487 RGQRLG----AAAAAFGYNSXXXXXXXXXXXXXXXXSSLASLPLHGSCNRSLGIQVHSMI 654
           RGQRLG    AAA AFG+                  SS+ASLPLHG+ NRSLGIQVHSMI
Sbjct: 138 RGQRLGAPMVAAATAFGH----------PYFHHQHYSSMASLPLHGAYNRSLGIQVHSMI 187

Query: 655 QKPFFVPSSSSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQPSRSGAARFDT 834
            KP     SS +  LYGH  WSRPPI+ QP +GRL A+E    G++    SR G  RFDT
Sbjct: 188 HKPSLTTPSSGSGNLYGHRSWSRPPIDQQPAVGRL-AVENCHEGVTAGPLSRGGIGRFDT 246

Query: 835 ARKL--GPNDEGIGGYRWAATGSNQPKNN 915
            R +     +EGIGG+ W  TG  + K N
Sbjct: 247 VRMMINSQANEGIGGFCW--TGGGRLKTN 273


>emb|CAN74885.1| hypothetical protein VITISV_000223 [Vitis vinifera]
          Length = 267

 Score =  206 bits (525), Expect = 6e-51
 Identities = 119/204 (58%), Positives = 132/204 (64%), Gaps = 1/204 (0%)
 Frame = +1

Query: 307 ELNLIDCFNLGPSQKSLDALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 486
           ELNLI+ F +G SQ   +     E EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 72  ELNLINSFEMGSSQNQSEIPQGNEGEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 131

Query: 487 RGQRLGAAAAAFGYNSXXXXXXXXXXXXXXXXSSLASLPLHGSCNRSLGIQVHSMIQKPF 666
           RGQR+GAA+ AFG+                  SS+ASLPLHGS NRSLGIQ HS+I KP 
Sbjct: 132 RGQRIGAASVAFGH----------PLPNPYRFSSMASLPLHGSFNRSLGIQAHSLIHKP- 180

Query: 667 FVPSSSSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQPSRSGAARFDTARKL 846
               SS +  LYGH GWSR PI+ QP IGRLA  E Y  G S    S  GAARF+T RK 
Sbjct: 181 ----SSLSSTLYGHQGWSRLPIDQQPAIGRLAP-ENYHVGSS---SSSGGAARFETVRKF 232

Query: 847 G-PNDEGIGGYRWAATGSNQPKNN 915
             P  EGIGGY W    SN  K N
Sbjct: 233 SRPASEGIGGYWW--NNSNNLKMN 254


>ref|XP_002272545.1| PREDICTED: zinc finger protein 1-like [Vitis vinifera]
          Length = 267

 Score =  206 bits (524), Expect = 8e-51
 Identities = 119/204 (58%), Positives = 132/204 (64%), Gaps = 1/204 (0%)
 Frame = +1

Query: 307 ELNLIDCFNLGPSQKSLDALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 486
           ELNLI+ F +G SQ   +     E EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 72  ELNLINSFEMGSSQNHSEIPQGNEGEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 131

Query: 487 RGQRLGAAAAAFGYNSXXXXXXXXXXXXXXXXSSLASLPLHGSCNRSLGIQVHSMIQKPF 666
           RGQR+GAA+ AFG+                  SS+ASLPLHGS NRSLGIQ HS+I KP 
Sbjct: 132 RGQRIGAASVAFGH----------PLPNPYRFSSMASLPLHGSFNRSLGIQAHSLIHKP- 180

Query: 667 FVPSSSSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQPSRSGAARFDTARKL 846
               SS +  LYGH GWSR PI+ QP IGRLA  E Y  G S    S  GAARF+T RK 
Sbjct: 181 ----SSLSSTLYGHQGWSRLPIDQQPAIGRLAP-ENYHVGSS---SSSGGAARFETVRKF 232

Query: 847 G-PNDEGIGGYRWAATGSNQPKNN 915
             P  EGIGGY W    SN  K N
Sbjct: 233 SRPASEGIGGYWW--NNSNNLKMN 254


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