BLASTX nr result
ID: Coptis23_contig00017891
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00017891 (597 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27138.3| unnamed protein product [Vitis vinifera] 363 2e-98 ref|NP_197702.1| C3HC4-type RING finger domain-containing protei... 344 8e-93 ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra... 343 1e-92 ref|XP_002527141.1| protein binding protein, putative [Ricinus c... 330 9e-89 gb|EEE61898.1| hypothetical protein OsJ_16607 [Oryza sativa Japo... 330 1e-88 >emb|CBI27138.3| unnamed protein product [Vitis vinifera] Length = 3960 Score = 363 bits (931), Expect = 2e-98 Identities = 173/198 (87%), Positives = 187/198 (94%) Frame = +2 Query: 2 AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSL 181 +ILLEDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGAT VCLCLDRRVHG +SL Sbjct: 14 SILLEDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGSESL 73 Query: 182 LSHKLSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDV 361 LS KL++WQGPALLA+N+A+FTE+DFVSISRIG S KHGQ+WKTGRFGVGFNSVYHLTD+ Sbjct: 74 LSEKLAQWQGPALLAYNNAEFTEEDFVSISRIGGSNKHGQAWKTGRFGVGFNSVYHLTDL 133 Query: 362 PSFVSDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPF 541 PSFVS KYVVLFDPQGVYLPNVS ANPGKRIEYVSSSA+SLY DQFLPYCAFGCDMK PF Sbjct: 134 PSFVSGKYVVLFDPQGVYLPNVSTANPGKRIEYVSSSAISLYKDQFLPYCAFGCDMKHPF 193 Query: 542 QGTLFRFPLRNVDQAAVS 595 GTLFRFPLRN DQAA+S Sbjct: 194 SGTLFRFPLRNADQAAIS 211 Score = 142 bits (358), Expect = 4e-32 Identities = 72/172 (41%), Positives = 101/172 (58%) Frame = +2 Query: 80 GTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHKLSEWQGPALLAFNDAQFTEDDF 259 G +L EL+QNA+DAGA+ V LD+ +G S+LS ++++WQGPAL FND+ F+ D Sbjct: 932 GPGILFELVQNAEDAGASEVIFLLDKTQYGTSSILSPEMADWQGPALYCFNDSVFSPQDL 991 Query: 260 VSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFVSDKYVVLFDPQGVYLPNVSAAN 439 +ISRI D+P+FVS + +V+FDP LP +S ++ Sbjct: 992 YAISRI--------------------------DIPTFVSGENIVMFDPHACNLPGISPSH 1025 Query: 440 PGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTLFRFPLRNVDQAAVS 595 PG RI YV + + DQF P+ FGCD++ PF GTLFRFPLR+ A+ S Sbjct: 1026 PGLRIRYVGRRILEQFPDQFSPFLHFGCDLQNPFPGTLFRFPLRSASVASRS 1077 Score = 85.9 bits (211), Expect = 5e-15 Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 2/155 (1%) Frame = +2 Query: 47 RIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHKLSEWQGPALLA 226 +I E+LV+Y + +L +L++ AD A + L D+R H SLL H L E+QGPAL+A Sbjct: 2158 KISELLVSYGDRDFLLFDLLELADCCKAKKLHLIFDKREHPRQSLLQHNLGEFQGPALVA 2217 Query: 227 FND-AQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFVSDKYVVLFDP 403 + A + ++ S+ + + G T +G+G S Y ++D+PS VS Y +FDP Sbjct: 2218 IMEGASLSREEVSSLQLLPPWRLRGD---TLNYGLGLLSCYSISDLPSIVSGGYFYIFDP 2274 Query: 404 QGVYLPNVSAANP-GKRIEYVSSSAMSLYNDQFLP 505 G+ LP S+ P K + ++ + DQF P Sbjct: 2275 HGLALPGSSSHGPTAKVFSLIGTNLTERFCDQFNP 2309 >ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein product [Arabidopsis thaliana] gi|332005740|gb|AED93123.1| C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] Length = 4706 Score = 344 bits (882), Expect = 8e-93 Identities = 164/198 (82%), Positives = 180/198 (90%) Frame = +2 Query: 2 AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSL 181 ++LLEDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGAT V LCLDRRVHG SL Sbjct: 3 SLLLEDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRVHGSGSL 62 Query: 182 LSHKLSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDV 361 LS L++WQGP+LLA+NDA FTE+DFVSISRIG S KHGQ+WKTGRFGVGFNSVYHLTD+ Sbjct: 63 LSDSLAQWQGPSLLAYNDAVFTEEDFVSISRIGGSGKHGQAWKTGRFGVGFNSVYHLTDI 122 Query: 362 PSFVSDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPF 541 PSFVS KYVVLFDPQG YLPN+SAANPGKRI+YV SSA+S Y DQFLPYCAFGCDM+ PF Sbjct: 123 PSFVSGKYVVLFDPQGAYLPNISAANPGKRIDYVGSSALSQYKDQFLPYCAFGCDMRSPF 182 Query: 542 QGTLFRFPLRNVDQAAVS 595 GTLFRFPLRN +QAA S Sbjct: 183 NGTLFRFPLRNTEQAASS 200 Score = 197 bits (500), Expect = 1e-48 Identities = 92/191 (48%), Positives = 128/191 (67%) Frame = +2 Query: 14 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHK 193 E FGQ LT R++ +L Y +G +L EL+QNA+DAGA+ V LD+ +G SLLS + Sbjct: 1379 EAFGQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVTFLLDKTHYGTSSLLSPE 1438 Query: 194 LSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFV 373 +++WQGPAL FN++ FT+ D +ISRIG + K + + GRFG+GFN VYH TD+P FV Sbjct: 1439 MADWQGPALYCFNNSVFTQQDMYAISRIGQASKLEKPFAIGRFGLGFNCVYHFTDIPGFV 1498 Query: 374 SDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTL 553 S + +V+FDP +LP +S +PG RI++ + + DQF P+ FGCD++ F GTL Sbjct: 1499 SGENIVMFDPHANHLPGISPTHPGLRIKFAGRYILDQFPDQFAPFLHFGCDLEHTFPGTL 1558 Query: 554 FRFPLRNVDQA 586 FRFPLRN A Sbjct: 1559 FRFPLRNASVA 1569 Score = 76.3 bits (186), Expect = 4e-12 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 2/176 (1%) Frame = +2 Query: 47 RIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHKLSEWQGPALLA 226 +++E+L Y +L +L++ AD + + D+R H +LL H L E+QGPA++A Sbjct: 2783 KLKELLSLYASKDFLLFDLLELADCCKVKKLHIIFDKREHPRKTLLQHNLGEFQGPAIVA 2842 Query: 227 -FNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFVSDKYVVLFDP 403 T ++ S+ + + G+ T +G+G S Y + D+ S VS Y +FDP Sbjct: 2843 ILEGVTLTREEICSLQLLSQWRIKGE---TLNYGLGLLSCYFMCDLLSIVSGGYFYMFDP 2899 Query: 404 QGVYL-PNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTLFRFPL 568 QG L + + A GK + ++ + ++DQF P T+ R PL Sbjct: 2900 QGATLSASTTQAPAGKMFSLIGTNLVERFSDQFNPMLIGQDKAWSLTDSTIIRMPL 2955 >ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297317873|gb|EFH48295.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] Length = 4711 Score = 343 bits (880), Expect = 1e-92 Identities = 164/198 (82%), Positives = 180/198 (90%) Frame = +2 Query: 2 AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSL 181 ++LLEDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGAT V LCLDRRVHG SL Sbjct: 3 SLLLEDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRVHGSGSL 62 Query: 182 LSHKLSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDV 361 LS L++WQGP+LLA+NDA FTE+DFVSISRIG S KHGQ+WKTGRFGVGFNSVYHLTD+ Sbjct: 63 LSDSLAQWQGPSLLAYNDAVFTEEDFVSISRIGGSGKHGQAWKTGRFGVGFNSVYHLTDI 122 Query: 362 PSFVSDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPF 541 PSFVS KYVVLFDPQG YLPN+SAANPGKRI+YV SSA+S Y DQFLPYCAFGCDM+ PF Sbjct: 123 PSFVSGKYVVLFDPQGAYLPNISAANPGKRIDYVGSSALSQYKDQFLPYCAFGCDMRSPF 182 Query: 542 QGTLFRFPLRNVDQAAVS 595 GTLFRFPLRN +QAA S Sbjct: 183 HGTLFRFPLRNPEQAASS 200 Score = 198 bits (503), Expect = 7e-49 Identities = 92/191 (48%), Positives = 129/191 (67%) Frame = +2 Query: 14 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHK 193 E FGQ LT R++ +L Y +G +L EL+QNA+DAGA+ V LD+ +G SLLS + Sbjct: 1379 EAFGQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVTFLLDKTHYGTSSLLSPE 1438 Query: 194 LSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFV 373 +++WQGPAL FN++ FT+ D +ISRIG + K + + GRFG+GFN VYH TD+P FV Sbjct: 1439 MADWQGPALYCFNNSVFTQQDMYAISRIGQASKLEKPFAIGRFGLGFNCVYHFTDIPGFV 1498 Query: 374 SDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTL 553 S + +V+FDP +LP +S +PG RI++ + + + DQF P+ FGCD++ F GTL Sbjct: 1499 SGENIVMFDPHANHLPGISPTHPGLRIKFAGRNILDQFPDQFAPFLHFGCDLEHTFPGTL 1558 Query: 554 FRFPLRNVDQA 586 FRFPLRN A Sbjct: 1559 FRFPLRNASVA 1569 Score = 74.7 bits (182), Expect = 1e-11 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 2/176 (1%) Frame = +2 Query: 47 RIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHKLSEWQGPALLA 226 +++E+L Y +L +L++ AD + + D+R H +LL H L E+QGPAL+A Sbjct: 2783 KLKELLSLYASKDFLLFDLLELADCCRVKKLHIIFDKREHSRKTLLQHNLGEFQGPALVA 2842 Query: 227 -FNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFVSDKYVVLFDP 403 T ++ S+ + + G+ T +G+G S Y + D+ S VS Y +FDP Sbjct: 2843 ILEGVTLTREEVCSLQLLSQWRIKGE---TLNYGLGLLSCYFMCDLLSIVSGGYFYMFDP 2899 Query: 404 QGVYLPNVSAANP-GKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTLFRFPL 568 QG L + P K + ++ + ++DQF P T+ R PL Sbjct: 2900 QGATLSAPTTQAPAAKMFSLIGTNLVERFSDQFNPMLIGQDKAWSLTDSTIIRMPL 2955 >ref|XP_002527141.1| protein binding protein, putative [Ricinus communis] gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] Length = 4704 Score = 330 bits (847), Expect = 9e-89 Identities = 158/198 (79%), Positives = 178/198 (89%) Frame = +2 Query: 2 AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSL 181 +I LEDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGAT V LCLDRR+H DS+ Sbjct: 11 SIFLEDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRLHRSDSI 70 Query: 182 LSHKLSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDV 361 +S LS+WQGPALLA+NDA FTE+DFVSISRIG S KHGQ+WKTGRFGVGFNSVYHLTD+ Sbjct: 71 ISTSLSQWQGPALLAYNDAVFTEEDFVSISRIGGSAKHGQAWKTGRFGVGFNSVYHLTDL 130 Query: 362 PSFVSDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPF 541 PSFVS KY+VLFDPQGV+LPNVS +NPGKRI++VSSSA++ Y+DQF PY AFGCDMK F Sbjct: 131 PSFVSGKYIVLFDPQGVHLPNVSTSNPGKRIDFVSSSAINFYDDQFSPYIAFGCDMKSSF 190 Query: 542 QGTLFRFPLRNVDQAAVS 595 GTLFRFPLRN +QAA S Sbjct: 191 NGTLFRFPLRNANQAATS 208 Score = 191 bits (486), Expect = 6e-47 Identities = 89/187 (47%), Positives = 125/187 (66%) Frame = +2 Query: 14 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHK 193 E FGQ LT R++ +L Y +G +L EL+QNA+DAGA+ V LD+ +G S+LS + Sbjct: 1385 EAFGQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVIFLLDKTQYGTSSVLSPE 1444 Query: 194 LSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFV 373 +++WQGPAL FND+ F+ D +ISRIG K + GRFG+GFN VYH TD+P+FV Sbjct: 1445 MADWQGPALYCFNDSVFSPQDLYAISRIGQESKLEKPLAIGRFGLGFNCVYHFTDIPTFV 1504 Query: 374 SDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTL 553 S + +V+FDP LP +S ++PG RI++ + + DQF P+ FGCD++ F GTL Sbjct: 1505 SGENIVMFDPHACNLPGISPSHPGLRIKFAGRKILEQFPDQFSPFLHFGCDLQHSFPGTL 1564 Query: 554 FRFPLRN 574 FRFPLR+ Sbjct: 1565 FRFPLRS 1571 Score = 70.9 bits (172), Expect = 2e-10 Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 2/176 (1%) Frame = +2 Query: 47 RIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHKLSEWQGPALLA 226 +I E+L Y +L +L++ AD A + L D+R H SLL L E+QGPAL+A Sbjct: 2806 KINELLALYGNSDFLLFDLLELADCCKAKKLHLIFDKREHPRQSLLQQNLGEFQGPALVA 2865 Query: 227 -FNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFVSDKYVVLFDP 403 +D S+ + + G T +G+G S Y + D+ S +S Y +FDP Sbjct: 2866 ILEGVSLNREDVSSLQLLPPWRLRG---NTLNYGLGLLSCYFICDLLSVISGGYFYMFDP 2922 Query: 404 QGVYLPNVSAANP-GKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTLFRFPL 568 G+ L S+ P K + ++ ++DQF P T+ R PL Sbjct: 2923 CGLALGVPSSHTPAAKMFSLIGTNLTERFSDQFNPMLIGEKKSWLSQDSTIIRMPL 2978 >gb|EEE61898.1| hypothetical protein OsJ_16607 [Oryza sativa Japonica Group] Length = 4635 Score = 330 bits (846), Expect = 1e-88 Identities = 157/197 (79%), Positives = 176/197 (89%) Frame = +2 Query: 5 ILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLL 184 +LLEDFGQRVDLTRRIREVL NYPEGTT L+ELIQNADDAGA+ V LCLDRR HG SLL Sbjct: 6 MLLEDFGQRVDLTRRIREVLANYPEGTTALRELIQNADDAGASRVRLCLDRRAHGAGSLL 65 Query: 185 SHKLSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVP 364 + L++WQGPALLA+NDA FT++DF SISRIGDS+K Q WKTGRFGVGFNSVYHLTD+P Sbjct: 66 APALAQWQGPALLAYNDAVFTDEDFASISRIGDSRKVSQVWKTGRFGVGFNSVYHLTDLP 125 Query: 365 SFVSDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQ 544 SFVS KY+VLFDPQG YLPNVSAANPGKRI++VSSSA++LYNDQ PYCAFGCDMK PFQ Sbjct: 126 SFVSGKYIVLFDPQGAYLPNVSAANPGKRIDFVSSSAITLYNDQLSPYCAFGCDMKAPFQ 185 Query: 545 GTLFRFPLRNVDQAAVS 595 GTLFRFPLR +QA++S Sbjct: 186 GTLFRFPLRTAEQASLS 202 Score = 201 bits (510), Expect = 1e-49 Identities = 95/194 (48%), Positives = 133/194 (68%) Frame = +2 Query: 14 EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHK 193 E FGQ DLT R++ ++ Y +G +L EL+QNA+DA A+ V LD+ +G S+LS + Sbjct: 1382 EAFGQHEDLTTRLKHIVEMYADGPGILFELVQNAEDAKASEVVFLLDKTHYGTSSILSPE 1441 Query: 194 LSEWQGPALLAFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFV 373 ++EWQGPAL FND+ F+ D +ISRIG K + + GRFG+GFN VYH TD+P FV Sbjct: 1442 MAEWQGPALYCFNDSIFSPQDLYAISRIGQDSKLEKPFAIGRFGLGFNCVYHFTDIPGFV 1501 Query: 374 SDKYVVLFDPQGVYLPNVSAANPGKRIEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTL 553 S + +V+FDP YLP +S ++PG RI++V + + DQF P+ FGC++++PF GTL Sbjct: 1502 SGENIVMFDPHASYLPGISPSHPGLRIKFVGRRILEQFPDQFTPFLHFGCNLQQPFPGTL 1561 Query: 554 FRFPLRNVDQAAVS 595 FRFPLRN +AA S Sbjct: 1562 FRFPLRN--EAAAS 1573 Score = 63.5 bits (153), Expect = 3e-08 Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 2/176 (1%) Frame = +2 Query: 47 RIREVLVNYPEGTTVLKELIQNADDAGATNVCLCLDRRVHGVDSLLSHKLSEWQGPAL-L 223 +I E+L Y E +L +LI+ AD A V L D+R H SLL L ++QG +L + Sbjct: 2792 KISELLALYGESDFLLFDLIELADHCNAKKVHLIYDKRDHPKQSLLQQSLGDFQGSSLTV 2851 Query: 224 AFNDAQFTEDDFVSISRIGDSKKHGQSWKTGRFGVGFNSVYHLTDVPSFVSDKYVVLFDP 403 F + ++ S+ K G +G+G S Y + D S +S Y +FDP Sbjct: 2852 VFEGTIMSREEVCSLQLPPPWKLKGNIL---NYGLGLLSSYFVCDTLSILSGGYFYIFDP 2908 Query: 404 QGVYLPNVSAANPGKR-IEYVSSSAMSLYNDQFLPYCAFGCDMKKPFQGTLFRFPL 568 G+ S A R + + + ++DQF P T+ R PL Sbjct: 2909 LGLTGGTTSIATSSARFFSLIGNDLVERFHDQFTPMRVTQEASLSSANSTVIRMPL 2964