BLASTX nr result

ID: Coptis23_contig00017870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017870
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512546.1| conserved hypothetical protein [Ricinus comm...   243   2e-62
ref|XP_002512547.1| conserved hypothetical protein [Ricinus comm...   236   2e-60
ref|XP_002882112.1| ATGOLS1 [Arabidopsis lyrata subsp. lyrata] g...   235   2e-60
ref|NP_001234668.1| galactinol synthase 2 [Solanum lycopersicum]...   234   4e-60
ref|XP_002320958.1| predicted protein [Populus trichocarpa] gi|2...   234   4e-60

>ref|XP_002512546.1| conserved hypothetical protein [Ricinus communis]
           gi|223548507|gb|EEF49998.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score =  243 bits (619), Expect = 2e-62
 Identities = 115/150 (76%), Positives = 128/150 (85%)
 Frame = -3

Query: 493 MFVFEPTLSTYDDLLNACKSTPPTPFAEQDLLNMFFKDIYKPIPLVYNLVLAMLWRHPQN 314
           MFVFEP+LSTYDDLLN  K TPPTPFAEQD LNMFFKDIY+PIP +YNLVLA+LWRHP+N
Sbjct: 191 MFVFEPSLSTYDDLLNTVKLTPPTPFAEQDFLNMFFKDIYRPIPPIYNLVLALLWRHPEN 250

Query: 313 VQLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYKKPVDIGST 134
           ++ EKVKVVHYCAAGSKPWR+TGKE+NMDREDIKMLVK WWDIY DESLDYK  V   +T
Sbjct: 251 IEFEKVKVVHYCAAGSKPWRYTGKEDNMDREDIKMLVKKWWDIYEDESLDYKNTV--AAT 308

Query: 133 LERVDTPVPTLLAALSEAGVVHYVSAPSAA 44
               +  +   LAALSEAGVVHYV+APSAA
Sbjct: 309 GGATEGELQPFLAALSEAGVVHYVTAPSAA 338


>ref|XP_002512547.1| conserved hypothetical protein [Ricinus communis]
           gi|223548508|gb|EEF49999.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  236 bits (601), Expect = 2e-60
 Identities = 111/150 (74%), Positives = 125/150 (83%)
 Frame = -3

Query: 493 MFVFEPTLSTYDDLLNACKSTPPTPFAEQDLLNMFFKDIYKPIPLVYNLVLAMLWRHPQN 314
           MFVFEP+L TYDDLLN  K TPPTPFAEQD LNMFFKDIY+PIP +YNLVLA+LWRHP+N
Sbjct: 191 MFVFEPSLPTYDDLLNTVKLTPPTPFAEQDFLNMFFKDIYRPIPPIYNLVLALLWRHPEN 250

Query: 313 VQLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYKKPVDIGST 134
           ++LEKVKVVHYCAAGSKPWR+TGKEENMDREDIK LVK WWDIY DESLDYK      +T
Sbjct: 251 IELEKVKVVHYCAAGSKPWRYTGKEENMDREDIKTLVKKWWDIYEDESLDYKNTA-AAAT 309

Query: 133 LERVDTPVPTLLAALSEAGVVHYVSAPSAA 44
               +  +  LLAA+SEA  VHY++APSAA
Sbjct: 310 GGATEAGLQPLLAAMSEASEVHYITAPSAA 339


>ref|XP_002882112.1| ATGOLS1 [Arabidopsis lyrata subsp. lyrata]
           gi|297327951|gb|EFH58371.1| ATGOLS1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 344

 Score =  235 bits (600), Expect = 2e-60
 Identities = 113/150 (75%), Positives = 125/150 (83%)
 Frame = -3

Query: 493 MFVFEPTLSTYDDLLNACKSTPPTPFAEQDLLNMFFKDIYKPIPLVYNLVLAMLWRHPQN 314
           MF+FEP L TY+DLL   K TPPTPFAEQD LNM+FK IYKPIPLVYNLVLAMLWRHP+N
Sbjct: 196 MFLFEPNLETYEDLLRTLKITPPTPFAEQDFLNMYFKKIYKPIPLVYNLVLAMLWRHPEN 255

Query: 313 VQLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYKKPVDIGST 134
           V+L KVKVVHYCAAGSKPWR+TGKE NMDREDIKMLVK WWDIYNDESLDYKKPV +  T
Sbjct: 256 VELGKVKVVHYCAAGSKPWRYTGKEANMDREDIKMLVKKWWDIYNDESLDYKKPVAVVGT 315

Query: 133 LERVDTPVPTLLAALSEAGVVHYVSAPSAA 44
            E     +   + AL+EAG V+YV+APSAA
Sbjct: 316 -EADPVNLKPFITALTEAGRVNYVTAPSAA 344


>ref|NP_001234668.1| galactinol synthase 2 [Solanum lycopersicum]
           gi|403399401|sp|C7G304.1|GOLS2_SOLLC RecName:
           Full=Galactinol synthase 2; Short=GolS-2; Short=SlGolS2
           gi|256542214|dbj|BAH98060.1| galactinol synthase
           [Solanum lycopersicum]
          Length = 338

 Score =  234 bits (598), Expect = 4e-60
 Identities = 109/150 (72%), Positives = 127/150 (84%)
 Frame = -3

Query: 493 MFVFEPTLSTYDDLLNACKSTPPTPFAEQDLLNMFFKDIYKPIPLVYNLVLAMLWRHPQN 314
           MFV+EP+LSTYDDLL   K TPPTPFAEQD LNM+F+D+YKPIP  YNLVLAMLWRHP+N
Sbjct: 189 MFVYEPSLSTYDDLLKTLKVTPPTPFAEQDFLNMYFRDVYKPIPNDYNLVLAMLWRHPEN 248

Query: 313 VQLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYKKPVDIGST 134
           V LEKVKVVHYCAAGSKPWR+TGKEENMDREDIKML+K WWDIY+DESLDYK    + + 
Sbjct: 249 VDLEKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLIKKWWDIYDDESLDYKNSNVVMNA 308

Query: 133 LERVDTPVPTLLAALSEAGVVHYVSAPSAA 44
           ++  +     ++ ALSEAGVVHY++APSAA
Sbjct: 309 VDG-EVEAQKIMEALSEAGVVHYITAPSAA 337


>ref|XP_002320958.1| predicted protein [Populus trichocarpa] gi|222861731|gb|EEE99273.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  234 bits (598), Expect = 4e-60
 Identities = 114/150 (76%), Positives = 126/150 (84%)
 Frame = -3

Query: 493 MFVFEPTLSTYDDLLNACKSTPPTPFAEQDLLNMFFKDIYKPIPLVYNLVLAMLWRHPQN 314
           MFVFEP++STY DLL   K TPPTPFAEQD LNM+FKDIYKPIPLVYNLVLAMLWRHP N
Sbjct: 189 MFVFEPSISTYHDLLKTLKVTPPTPFAEQDFLNMYFKDIYKPIPLVYNLVLAMLWRHPDN 248

Query: 313 VQLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYKKPVDIGST 134
           V+L+KVKVVHYCAAGSKPWR+TGKEENM REDIKMLV+ WW IYNDESLDY K V  G  
Sbjct: 249 VELDKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVEKWWGIYNDESLDYMKFVADGFD 308

Query: 133 LERVDTPVPTLLAALSEAGVVHYVSAPSAA 44
            E V+  + + +AALSEAG V YV+APSAA
Sbjct: 309 AEPVN--LQSFIAALSEAGAVQYVTAPSAA 336


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