BLASTX nr result
ID: Coptis23_contig00017839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00017839
(971 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264349.1| PREDICTED: protein SCARECROW-like [Vitis vin... 338 1e-90
ref|XP_002519983.1| transcription factor, putative [Ricinus comm... 333 5e-89
ref|XP_002326418.1| GRAS family transcription factor [Populus tr... 320 3e-85
ref|XP_004163982.1| PREDICTED: uncharacterized protein LOC101230... 313 4e-83
ref|XP_004147549.1| PREDICTED: LOW QUALITY PROTEIN: protein SCAR... 313 4e-83
>ref|XP_002264349.1| PREDICTED: protein SCARECROW-like [Vitis vinifera]
Length = 782
Score = 338 bits (867), Expect = 1e-90
Identities = 193/340 (56%), Positives = 227/340 (66%), Gaps = 33/340 (9%)
Frame = +1
Query: 49 MDDNTATAWIDGIIKDLVHTSSSVSIPQLIQNIRDIIYPCNANLAAVLEYRLRSLMEP-- 222
M+D TATAWIDGI+KDL+H+S++V IPQLIQN+R+II+PCN NLA++LEYRLRSL +P
Sbjct: 193 MEDTTATAWIDGILKDLIHSSTNVPIPQLIQNVREIIHPCNPNLASILEYRLRSLTDPNP 252
Query: 223 VVEQTDRRNN---LVGLNR---QLHHTQVQQGS-------SGLDT-SFAFSDPT-SNAVN 357
+ +RR VGL R Q QV S SGLD ++ D S+ +N
Sbjct: 253 IPNYPERRRKDGPPVGLPRAYQQQGQVQVSSSSGLKLYLDSGLDNLHYSLPDSAASHVMN 312
Query: 358 PFIGWAVTNPPSNEG---LQHIHQQQSSPMTSIPPLVXXXXXXXXXXXXXXXXXXP---- 516
++ W +T PP+ QH+ Q+SP + P L P
Sbjct: 313 HYLNWGLTQPPTTTADGQAQHLSDHQASPSSVAPVLSLNQVHPPQPAQPQQPQNSPQSAE 372
Query: 517 ---------VAPITPQVAIRDKKEEIRQKKRDEEGXXXXXXXXQCAEAVSADNFQEANEM 669
AP + + ++KKEE RQ+KRDEEG QCAEAVSADNF+EAN+M
Sbjct: 373 PAGAAATITTAPTSAAIVTKEKKEETRQQKRDEEGLHLLTLLLQCAEAVSADNFEEANKM 432
Query: 670 LLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPNAPIHSQKMASAFQVFNG 849
LLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYA LP P HSQK+ SAFQVFNG
Sbjct: 433 LLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYATLPTVP-HSQKLVSAFQVFNG 491
Query: 850 ISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWP 969
ISPFVKFSHFTANQAIQEAFERE+RVHIIDLDIMQGLQWP
Sbjct: 492 ISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWP 531
>ref|XP_002519983.1| transcription factor, putative [Ricinus communis]
gi|223540747|gb|EEF42307.1| transcription factor,
putative [Ricinus communis]
Length = 843
Score = 333 bits (853), Expect = 5e-89
Identities = 199/345 (57%), Positives = 233/345 (67%), Gaps = 38/345 (11%)
Frame = +1
Query: 49 MDDNTATAWIDGIIKDLVHTSSSVSIPQLIQNIRDIIYPCNANLAAVLEYRLRSLMEPVV 228
M+D +ATAWIDGIIKDL+H+S++VSIPQLIQN+R+II+PCN +LA++LEYRLRSL E +
Sbjct: 240 MEDASATAWIDGIIKDLIHSSTNVSIPQLIQNVREIIFPCNPSLASLLEYRLRSLAEAI- 298
Query: 229 EQTDRRNNLVGLNRQLHHTQVQ-QGSSGLD---TSFAFSDPTSNA-----------VNPF 363
N V R+ ++ +Q QGSSGL TSF S P S A VN +
Sbjct: 299 -----PNYPVDRRRKEAYSNIQGQGSSGLSLNVTSFP-SLPDSTAAVAVVAAAPPVVNQY 352
Query: 364 IGWAVTNPPSNEGLQH--IH------QQQSSP-MTSIPPLV-------------XXXXXX 477
W T P N+ + H IH QQQ SP TS+ P V
Sbjct: 353 PSWGSTPPLINQHIHHHQIHIHDQQQQQQGSPSSTSVTPPVLGLNQGHPHPQPQQEQEKS 412
Query: 478 XXXXXXXXXXXXPVAPITPQVAIRDKKEEIRQKKRDEEGXXXXXXXXQCAEAVSADNFQE 657
P + TP + R+KKEE RQ+KRDEEG QCAEAVSADNF+E
Sbjct: 413 SSAETEHVAASTPASVPTPPTSAREKKEEQRQQKRDEEGLHLLTLLLQCAEAVSADNFEE 472
Query: 658 ANEMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPNAPI-HSQKMASAF 834
AN+MLLEIS+LSTP+GTSAQRVAAYFSEAMSARL++SCLGIYA LP+ P+ H+QKMASAF
Sbjct: 473 ANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLINSCLGIYATLPSMPLTHTQKMASAF 532
Query: 835 QVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWP 969
QVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWP
Sbjct: 533 QVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWP 577
>ref|XP_002326418.1| GRAS family transcription factor [Populus trichocarpa]
gi|222833611|gb|EEE72088.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 847
Score = 320 bits (820), Expect = 3e-85
Identities = 193/347 (55%), Positives = 226/347 (65%), Gaps = 41/347 (11%)
Frame = +1
Query: 52 DDNTATAWIDGIIKDLVHTSSSVSIPQLIQNIRDIIYPCNANLAAVLEYRLRSLMEPVVE 231
D ATAWIDGIIKDL+H+S++VS+PQLIQN+R+IIYPCN NLA++LEYRLRSL +P++
Sbjct: 242 DAAPATAWIDGIIKDLLHSSTNVSVPQLIQNVREIIYPCNPNLASLLEYRLRSLTDPIIP 301
Query: 232 ----QTDRRNN----LVGLNRQLHHTQVQQGSSGLD------TSFAFSDPTSNAVNPFIG 369
+RR N V L Q ++ Q SGL ++ A +S+ V+ +
Sbjct: 302 ANIYPVERRRNKEAAAVPLPFQRNYIQ-GHAPSGLSLDLDHVSNSALPPVSSHVVSHYSN 360
Query: 370 WAVTNP------------PSNEGLQHIHQQQSSP--MTSIPPLV-------XXXXXXXXX 486
W T P L H QQQ SP +++ P +
Sbjct: 361 WGPTPPLICQPNIQQQHQQPQAHLVHDQQQQESPSSTSNVTPTILALNQGHPPQQAQDQQ 420
Query: 487 XXXXXXXXXPVAPITPQ-----VAIRDKKEEIRQKKRDEEGXXXXXXXXQCAEAVSADNF 651
VA TP A RDKKEE+RQ+KR+EEG QCAEAVSADNF
Sbjct: 421 QEKSSSAETQVASSTPPPSSSVAASRDKKEEMRQQKRNEEGLHLLTLLLQCAEAVSADNF 480
Query: 652 QEANEMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPNAP-IHSQKMAS 828
+EAN+MLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYA LP+ P H+QKMAS
Sbjct: 481 EEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYATLPSMPQSHTQKMAS 540
Query: 829 AFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWP 969
AFQVFNGISPFVKFSHFTANQAIQEAFERE+RVHIIDLDIMQGLQWP
Sbjct: 541 AFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWP 587
>ref|XP_004163982.1| PREDICTED: uncharacterized protein LOC101230653 [Cucumis sativus]
Length = 858
Score = 313 bits (802), Expect = 4e-83
Identities = 193/365 (52%), Positives = 228/365 (62%), Gaps = 57/365 (15%)
Frame = +1
Query: 46 PMDDNTATAWIDGIIKDLVHTSSSVSIPQLIQNIRDIIYPCNANLAAVLEYRLRSLMEPV 225
PMDD++ATAWIDGIIKDL+H+S+++SIPQLIQN+R+IIYPCN NLA +LE+RLR+L +P
Sbjct: 239 PMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVREIIYPCNPNLANLLEFRLRTLTDPS 298
Query: 226 VEQTDRRNNLV--------------GLN-RQLHHTQVQQ--GSSGLDTSFAFSDPTS--N 348
V ++ V GL RQ + Q +Q SGL + D TS N
Sbjct: 299 VPNFATEDHRVRKSPLPLPAPVAGLGLQQRQFNQEQHEQEHDCSGLKLNL---DSTSLHN 355
Query: 349 AVN---------PFIGWAVTNPP---------SNEGLQHI---HQQQSSPMTS------- 444
N P++ W T PP + LQ + HQ S +T
Sbjct: 356 LSNFPSQPPFHEPYLQWGATPPPVPTPSAAAAGEDALQRLPGHHQLNLSSVTPSSLVSLN 415
Query: 445 -IPPLVXXXXXXXXXXXXXXXXXXPVAPITPQ------VAIRDKKEEIRQKKRDEEGXXX 603
+P P P T + IR+ KEE+RQ+KRDEEG
Sbjct: 416 HVPSKPQSEQQNSCTKAAAAAQPAPAPPSTSNNPSATALLIREIKEEMRQQKRDEEGLHL 475
Query: 604 XXXXXQCAEAVSADNFQEANEMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIY 783
QCAEAVSADN +EAN+MLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIY
Sbjct: 476 LTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIY 535
Query: 784 APLPNAPI---HSQKMASAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQ 954
A LP + + HSQK+ASAFQ+FNGISPFVKFSHFTANQAIQEAFERE+RVHIIDLDIMQ
Sbjct: 536 AALPPSLVPHTHSQKIASAFQIFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQ 595
Query: 955 GLQWP 969
GLQWP
Sbjct: 596 GLQWP 600
>ref|XP_004147549.1| PREDICTED: LOW QUALITY PROTEIN: protein SCARECROW-like [Cucumis
sativus]
Length = 859
Score = 313 bits (802), Expect = 4e-83
Identities = 193/365 (52%), Positives = 228/365 (62%), Gaps = 57/365 (15%)
Frame = +1
Query: 46 PMDDNTATAWIDGIIKDLVHTSSSVSIPQLIQNIRDIIYPCNANLAAVLEYRLRSLMEPV 225
PMDD++ATAWIDGIIKDL+H+S+++SIPQLIQN+R+IIYPCN NLA +LE+RLR+L +P
Sbjct: 239 PMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVREIIYPCNPNLANLLEFRLRTLTDPS 298
Query: 226 VEQTDRRNNLV--------------GLN-RQLHHTQVQQ--GSSGLDTSFAFSDPTS--N 348
V ++ V GL RQ + Q +Q SGL + D TS N
Sbjct: 299 VPNFATEDHRVRKSPLPLPAPVAGLGLQQRQFNQEQHEQEHDCSGLKLNL---DSTSLHN 355
Query: 349 AVN---------PFIGWAVTNPP---------SNEGLQHI---HQQQSSPMTS------- 444
N P++ W T PP + LQ + HQ S +T
Sbjct: 356 LSNFPSQPPFHEPYLQWGATPPPVPTPSAAAAGEDALQRLPGHHQLNLSSVTPSSLVSLN 415
Query: 445 -IPPLVXXXXXXXXXXXXXXXXXXPVAPITPQ------VAIRDKKEEIRQKKRDEEGXXX 603
+P P P T + IR+ KEE+RQ+KRDEEG
Sbjct: 416 HVPSKPQSEQQNSCTKAAAAAQPAPAPPSTSNNPSATALLIREIKEEMRQQKRDEEGLHL 475
Query: 604 XXXXXQCAEAVSADNFQEANEMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIY 783
QCAEAVSADN +EAN+MLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIY
Sbjct: 476 LTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIY 535
Query: 784 APLPNAPI---HSQKMASAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQ 954
A LP + + HSQK+ASAFQ+FNGISPFVKFSHFTANQAIQEAFERE+RVHIIDLDIMQ
Sbjct: 536 AALPPSLVPHTHSQKIASAFQIFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQ 595
Query: 955 GLQWP 969
GLQWP
Sbjct: 596 GLQWP 600