BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017837
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   4e-06

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = +2

Query: 404  GLVLRNYKGEFLGAAAGGMGIATNFLAETMAVVKAIKKALELGWRYILVECDSSSVVKAF 583
            G + R+  G FLGA +  +G+A+ F AET+A + A++ A   GWR + +E DS+S +  F
Sbjct: 1039 GGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTSALMIF 1098

Query: 584  QNNT-VHWRFKYQW 622
             N++ V W  + +W
Sbjct: 1099 SNSSLVQWLLRNRW 1112