BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017836
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   179   1e-42
ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   177   2e-42
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   175   1e-41
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...   173   4e-41
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   169   8e-40

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score =  179 bits (453), Expect = 1e-42
 Identities = 99/225 (44%), Positives = 137/225 (60%), Gaps = 5/225 (2%)
 Frame = -3

Query: 780 DRITILPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 613
           DRI+ LP  +++++L+ + IR+ VRTS LS KWRYKW  +P +VFD H +  + Q+    
Sbjct: 17  DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMII 76

Query: 612 QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSIKTIILDFPQGDRY 433
           +  L   ++HVL LH G +NKF +S   +    D+DRW L LCRKSIK  +L+  +G RY
Sbjct: 77  KNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHLCRKSIKEFVLEIWKGQRY 136

Query: 432 KVPSSLFSCQKLELLKLHCSILNLPSHVKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 256
           K+ S LFSCQ L  L+L    L  PS  + F+NL  LDL  VTL  +    L+ +CP L+
Sbjct: 137 KIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPLLE 196

Query: 255 KLILTYCDGFTRLNVCAPNLIIFVLCSPCGSIYFDNTPQLRSANI 121
           +L L   DGFT LN+ APNL+ F +      I F+NT QL   +I
Sbjct: 197 RLTLMNFDGFTNLNIDAPNLLFFDIGGKFEDISFENTFQLAVVSI 241


>ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355477725|gb|AES58928.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 657

 Score =  177 bits (450), Expect = 2e-42
 Identities = 98/236 (41%), Positives = 148/236 (62%), Gaps = 6/236 (2%)
 Frame = -3

Query: 780  DRITILPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 613
            DRI++LP +++++IL+ +PIRDVVRTS LS KWRYKW+ IP +VFD+  +  + +     
Sbjct: 323  DRISVLPGDVIDRILSCLPIRDVVRTSILSNKWRYKWITIPNLVFDSQCVSATSEHPAAI 382

Query: 612  QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSIKTIILDFPQGDRY 433
            +R L   ++HVL L+YG +NKF +S + + S   +DRWI  L R+SIK ++L    G  Y
Sbjct: 383  KRKLLAIIDHVLLLYYGPINKFKLSPFGLISATALDRWIFHLTRRSIKELVLGLSIGQSY 442

Query: 432  KVPSSLFSCQKLELLKLHCSILNLPSHVKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 256
            K+P  LFSCQ L  L L   +L  PS ++  +NL  L L +VT++ +    L+ +CP L+
Sbjct: 443  KIPWCLFSCQSLHYLTLFSCLLKPPSMIEGLKNLKSLYLVKVTISQDAFESLISSCPLLE 502

Query: 255  KLILTYCDGFTRLNVCAPNLIIFVLCSPCGSIYFDNTPQLRSANIEM-LPLVSEAS 91
            KL+L   DGFT++N+ APNL    +      I F+NT  L    +++ L L SE++
Sbjct: 503  KLMLAEFDGFTQINIHAPNLNGLGIVGKFEDISFENTYLLNYVIVDLSLCLNSESN 558



 Score =  149 bits (375), Expect = 1e-33
 Identities = 97/264 (36%), Positives = 142/264 (53%), Gaps = 6/264 (2%)
 Frame = -3

Query: 780 DRITILPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 613
           DRI+ LP +++++IL  +PIRDVVRTS L  KWRYKW  IP +VFD   +  +       
Sbjct: 7   DRISCLPGDVIDRILLRLPIRDVVRTSVLCNKWRYKWTTIPNLVFDKQCVSATSHRPLVI 66

Query: 612 QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSIKTIILDFPQGDRY 433
           +R L   ++HVL L+ G +NKF                     ++SIK ++++  +G  Y
Sbjct: 67  ERKLLAIIDHVLLLYSGPINKF---------------------KRSIKKLVIEISKGQPY 105

Query: 432 KVPSSLFSCQKLELLKLHCSILNLPSHVKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 256
           K+P  LFSCQ L  L L   +L  PS +  F+NL  L+L   T++ +    L+  CP L+
Sbjct: 106 KIPWCLFSCQSLLHLSLSYGLLKPPSTIVGFKNLKSLELDHFTMSQDAFENLLFGCPLLE 165

Query: 255 KLILTYCDGFTRLNVCAPNLIIFVLCSPCGSIYFDNTPQLRSANIEM-LPLVSEASLPDQ 79
           KLI    +GFT++N+ APNL    +      I F NT +L    +++ L L SE+S    
Sbjct: 166 KLIFDEFEGFTKININAPNLKSLGISGKFEDISFINTFKLTCVAVDLSLYLNSESS---- 221

Query: 78  ITNRLDVRLTGLINVQELYICKNF 7
            +N LD   T L +V ELY+   F
Sbjct: 222 -SNLLDF-FTQLHHVYELYVSGYF 243


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  175 bits (443), Expect = 1e-41
 Identities = 102/225 (45%), Positives = 136/225 (60%), Gaps = 5/225 (2%)
 Frame = -3

Query: 780 DRITILPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQEQRNL 601
           DRI+ LP  ++++IL+ + IRD VRTSALSRKWRYKW  IP +VFD   +    Q+Q  +
Sbjct: 16  DRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLVFDNKCVSIPSQDQTLI 75

Query: 600 ADS----VNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSIKTIILDFPQGDRY 433
            D     ++HVL LH G + KF +S   +   +D+DRWIL L R SIK  IL+  +G RY
Sbjct: 76  KDKLVNIIDHVLLLHNGPIQKFKLSHRDLLGVSDIDRWILHLSRSSIKEFILEIWKGQRY 135

Query: 432 KVPSSLFSCQKLELLKLHCSILNLPSHVKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 256
           KVPSSLFS + L  L+L   +L  P   K F +L  LDL  +TLT      L+ +CP L+
Sbjct: 136 KVPSSLFSFEHLIHLELFNCLLQPPLTFKGFRSLKSLDLQHITLTQNVFENLIFSCPLLE 195

Query: 255 KLILTYCDGFTRLNVCAPNLIIFVLCSPCGSIYFDNTPQLRSANI 121
           +L L   DGFT LN+ APNL  F +      + F+NT QL   +I
Sbjct: 196 RLTLMNFDGFTHLNINAPNLQFFDIGGVYDDVTFENTFQLTLVSI 240


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  173 bits (439), Expect = 4e-41
 Identities = 98/217 (45%), Positives = 134/217 (61%), Gaps = 5/217 (2%)
 Frame = -3

Query: 780 DRITILPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQEQ--- 610
           DRI+ LP  ++ +IL+L+PIRD VRTSAL RKWRYKW  IP IVFD+  I  S Q+Q   
Sbjct: 95  DRISSLPGHVLGQILSLLPIRDAVRTSALKRKWRYKWSQIPHIVFDSQGISISSQDQTTI 154

Query: 609 -RNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSIKTIILDFPQGDRY 433
              L + ++H+L LH G + KF +S   + + +D+DRWIL L R S K  +L+  +G +Y
Sbjct: 155 KNKLVNIIDHILLLHNGPIYKFKLSHCDLLAVSDIDRWILHLSRGSTKEFVLEIWKGQQY 214

Query: 432 KVPSSLFSCQKLELLKLHCSILNLPSHVKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 256
           K+PS LFS + L  L+L   +L  P   K F NL +LDL  VTL  E   +L+ +C  L+
Sbjct: 215 KLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNLKNLDLQHVTLAQEVFEKLISSCAMLE 274

Query: 255 KLILTYCDGFTRLNVCAPNLIIFVLCSPCGSIYFDNT 145
           +L L   DGFT LN+ APNL  F +      + F+NT
Sbjct: 275 RLTLINFDGFTHLNINAPNLQFFDVGGVFDDVSFENT 311


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  169 bits (428), Expect = 8e-40
 Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 7/267 (2%)
 Frame = -3

Query: 780 DRITILPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 613
           DRI+ LP  ++++IL+++PI++ VRTS LS KWRYKW  +P +VFD+  I  + ++    
Sbjct: 17  DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 76

Query: 612 QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSIKTIILDFPQGDRY 433
           +  L+  ++HVL LH G + KF +S   +    D+DRW L L R+ +K  +L+  +G RY
Sbjct: 77  KSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRY 136

Query: 432 KVPSSLFSCQKLELLKLHCSILNLPSHVKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 256
           K+PS LFSCQ L  L+L    L  PS  + F NL  LDL  VTL+ +    L+  CP L+
Sbjct: 137 KIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLE 196

Query: 255 KLILTYCDGFTRLNVCAPNLIIFVLCSPCGSIYFDNTPQLRSANIEMLPLV--SEASLPD 82
           +L L   DGF  LN+ APNL  F +      I F NT QL   +I +      S+  L  
Sbjct: 197 RLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHG 256

Query: 81  QITNRLDVRLTGLINVQELYICKNFME 1
           + +N ++  L  L  +Q L I   F++
Sbjct: 257 RTSNLVEF-LIHLPRIQRLEIQSYFLK 282