BLASTX nr result
ID: Coptis23_contig00017816
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00017816
(1518 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276826.1| PREDICTED: protein midA, mitochondrial [Viti... 723 0.0
ref|XP_002517464.1| conserved hypothetical protein [Ricinus comm... 711 0.0
gb|EEC70983.1| hypothetical protein OsI_02631 [Oryza sativa Indi... 705 0.0
ref|NP_001043438.1| Os01g0588800 [Oryza sativa Japonica Group] g... 705 0.0
ref|XP_004162586.1| PREDICTED: protein midA, mitochondrial-like ... 703 0.0
>ref|XP_002276826.1| PREDICTED: protein midA, mitochondrial [Vitis vinifera]
gi|296087782|emb|CBI35038.3| unnamed protein product
[Vitis vinifera]
Length = 483
Score = 723 bits (1866), Expect = 0.0
Identities = 347/420 (82%), Positives = 380/420 (90%)
Frame = -2
Query: 1289 LSIDRSGLYNPPEHSHEPCSDSELVKQLKGIIKFRGGPISVAEYMEEVLTNPKAGFYMNR 1110
+SIDRS LYNPPEHSHE SDSELVK LKGIIKFRGGPISVAEYMEEVLTNPKAGFY+NR
Sbjct: 63 ISIDRSALYNPPEHSHEHSSDSELVKHLKGIIKFRGGPISVAEYMEEVLTNPKAGFYINR 122
Query: 1109 DVFGSGGDFITSPEVSQMFGELIGVWTMCLWEQMGQPDKVNLIELGPGRGTLMADLLRGA 930
DVFG+ GDFITSPEVSQMFGE+IGVW MCLWEQMGQP KVNL+ELGPGRGTLMADLLRG
Sbjct: 123 DVFGTEGDFITSPEVSQMFGEMIGVWVMCLWEQMGQPSKVNLVELGPGRGTLMADLLRGT 182
Query: 929 SKFDKFTKSLRVHMVECSPTLQKLQYQTLKCADEDVGESNGDKRTISMFVGAPVSWHATL 750
SKF F +SL++HMVECSPTLQKLQ++ LKC DED N DKRTISM G PVSWHA L
Sbjct: 183 SKFKNFIESLQIHMVECSPTLQKLQHKNLKCVDEDSHNGNVDKRTISMLTGTPVSWHAAL 242
Query: 749 EQVPSGLPTIIIAHEFFDALPIHQFQKASRGWSEKMVDVAEDSSFQFVLSPQPTPATLSL 570
EQVPSGLPTIIIAHEF+DALP+HQFQ+ASRGW EKM+DVAEDSSF+FVLSPQ TPA L L
Sbjct: 243 EQVPSGLPTIIIAHEFYDALPVHQFQRASRGWCEKMIDVAEDSSFRFVLSPQSTPAKLYL 302
Query: 569 IKRCQWAAKEELAKLEQIEVCPKGMELTSNIAKRIGSDGGGALIIDYGLNGIVSDSLQAI 390
++RC+WA EE+AKL+QIEVCPK +ELT IAKRI SDGGGAL+IDYGL+GIVSDSLQAI
Sbjct: 303 MERCKWAGAEEIAKLDQIEVCPKAIELTHTIAKRISSDGGGALVIDYGLDGIVSDSLQAI 362
Query: 389 RKHKFVDILDDPGSADLSAYVDFASIRHSAEEASDNVSIHGPIIQSQFLGSLGINFRAEA 210
RKHKFV+ILD+PGSADLSAYVDFASIRHSAEEASD+V +HGPI QSQFLGSLGINFR EA
Sbjct: 363 RKHKFVNILDNPGSADLSAYVDFASIRHSAEEASDDVIVHGPITQSQFLGSLGINFRVEA 422
Query: 209 LVQNCNDEQADLLRSGYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQGVPVPF 30
L++NC DEQA+ LR+GYWRLVG+GEAPFWEGPDDQ PIGMGTRYL MAIVNKKQG+PV F
Sbjct: 423 LLKNCTDEQAESLRTGYWRLVGEGEAPFWEGPDDQVPIGMGTRYLVMAIVNKKQGIPVSF 482
>ref|XP_002517464.1| conserved hypothetical protein [Ricinus communis]
gi|223543475|gb|EEF45006.1| conserved hypothetical
protein [Ricinus communis]
Length = 490
Score = 711 bits (1834), Expect = 0.0
Identities = 336/421 (79%), Positives = 378/421 (89%)
Frame = -2
Query: 1292 TLSIDRSGLYNPPEHSHEPCSDSELVKQLKGIIKFRGGPISVAEYMEEVLTNPKAGFYMN 1113
T+S+DRSGLYNPPEHSHEP S+SEL K LKGIIKFRGGPI+VAEYMEEVLTNPKAGFY+N
Sbjct: 69 TVSVDRSGLYNPPEHSHEPNSESELFKHLKGIIKFRGGPITVAEYMEEVLTNPKAGFYIN 128
Query: 1112 RDVFGSGGDFITSPEVSQMFGELIGVWTMCLWEQMGQPDKVNLIELGPGRGTLMADLLRG 933
RDVFG+ GDFITSPEVSQMFGE++GVW +CLWEQM QP VNL+ELGPGRGTLMADLLRG
Sbjct: 129 RDVFGAEGDFITSPEVSQMFGEMVGVWALCLWEQMEQPKSVNLVELGPGRGTLMADLLRG 188
Query: 932 ASKFDKFTKSLRVHMVECSPTLQKLQYQTLKCADEDVGESNGDKRTISMFVGAPVSWHAT 753
ASKF FT+SL +HMVECSP LQKLQ+ LKC D++ +G++RTIS G P+SWH +
Sbjct: 189 ASKFKSFTESLHIHMVECSPALQKLQHHNLKCVDDNNSCGSGEERTISTLAGTPISWHTS 248
Query: 752 LEQVPSGLPTIIIAHEFFDALPIHQFQKASRGWSEKMVDVAEDSSFQFVLSPQPTPATLS 573
LEQVP+G PTIIIAHEF+DALP+HQFQ+ASRGW EKMVDVAEDS F+FVLSPQPTPATL
Sbjct: 249 LEQVPTGSPTIIIAHEFYDALPVHQFQRASRGWCEKMVDVAEDSMFRFVLSPQPTPATLY 308
Query: 572 LIKRCQWAAKEELAKLEQIEVCPKGMELTSNIAKRIGSDGGGALIIDYGLNGIVSDSLQA 393
L+KRC+WAA EE+ KL IEVCPK ++LT IAKRI SDGGGALIIDYGLNG+VSDSLQA
Sbjct: 309 LVKRCKWAAPEEIEKLNHIEVCPKAIDLTCTIAKRISSDGGGALIIDYGLNGVVSDSLQA 368
Query: 392 IRKHKFVDILDDPGSADLSAYVDFASIRHSAEEASDNVSIHGPIIQSQFLGSLGINFRAE 213
IRKHKFVDILD+PGSADLSAYVDFASIRHSAEEAS+ VS+HGPI QSQFLGSLGINFR E
Sbjct: 369 IRKHKFVDILDNPGSADLSAYVDFASIRHSAEEASEAVSVHGPITQSQFLGSLGINFRVE 428
Query: 212 ALVQNCNDEQADLLRSGYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQGVPVP 33
AL+QNC + QA+ LR+GYWRLVG+GEAPFWEGP++Q PIGMGTRYLAMAIVNKKQG+PVP
Sbjct: 429 ALLQNCTEVQAEFLRTGYWRLVGEGEAPFWEGPEEQVPIGMGTRYLAMAIVNKKQGIPVP 488
Query: 32 F 30
F
Sbjct: 489 F 489
>gb|EEC70983.1| hypothetical protein OsI_02631 [Oryza sativa Indica Group]
Length = 504
Score = 705 bits (1820), Expect = 0.0
Identities = 341/423 (80%), Positives = 379/423 (89%), Gaps = 1/423 (0%)
Frame = -2
Query: 1292 TLSIDRSGLYNPPEHSHEPCSDSELVKQLKGIIKFRGGPISVAEYMEEVLTNPKAGFYMN 1113
+++IDRSGLYNPPEHSHEP SDSELVK LK IIKFR GPISVAEYMEEVLTNP++GFY+N
Sbjct: 85 SITIDRSGLYNPPEHSHEPSSDSELVKHLKSIIKFRSGPISVAEYMEEVLTNPQSGFYIN 144
Query: 1112 RDVFGSGGDFITSPEVSQMFGELIGVWTMCLWEQMGQPDKVNLIELGPGRGTLMADLLRG 933
RDVFG+ GDFITSPEVSQMFGE+ GVW MCLWEQMGQP+KVNLIELGPGRGTL+ADLLRG
Sbjct: 145 RDVFGTSGDFITSPEVSQMFGEMTGVWAMCLWEQMGQPEKVNLIELGPGRGTLLADLLRG 204
Query: 932 ASKFDKFTKSLRVHMVECSPTLQKLQYQTLKCADEDVGESNGDKRTISMFVGAPVSWHAT 753
+SKF FTK+L +++VECSPTLQK+QY TLKC DE +G+ RT+S GAPV WHA+
Sbjct: 205 SSKFVNFTKALNINLVECSPTLQKVQYNTLKCEDEPIGDKT---RTVSKLCGAPVHWHAS 261
Query: 752 LEQVPSGLPTIIIAHEFFDALPIHQFQKASRGWSEKMVDVAEDSSFQFVLSPQPTPATLS 573
LEQVPSGLPTIIIAHEF+DALPIHQFQKASRGW EKMVD+AEDSSF+FVLSPQPT + L
Sbjct: 262 LEQVPSGLPTIIIAHEFYDALPIHQFQKASRGWCEKMVDLAEDSSFRFVLSPQPTASLLF 321
Query: 572 LIKRCQWAAKEELAKLEQIEVCPKGMELTSNIAKRIGSDGGGALIIDYGLNGIVSDSLQA 393
L KRC WA+ EEL K+E IEVCPK ME+T IA RI SDGGGALIIDYG +GIVSDSLQA
Sbjct: 322 LSKRCGWASSEELEKVEHIEVCPKAMEITEQIADRISSDGGGALIIDYGKDGIVSDSLQA 381
Query: 392 IRKHKFVDILDDPGSADLSAYVDFASIRHSAEEASDNVSIHGPIIQSQFLGSLGINFRAE 213
IRKHKFV ILD+PGSADLSAYVDFASIRHSA+EASD++S+HGP+ QSQFLGSLGINFR E
Sbjct: 382 IRKHKFVHILDNPGSADLSAYVDFASIRHSAKEASDDISVHGPMTQSQFLGSLGINFRVE 441
Query: 212 ALVQNC-NDEQADLLRSGYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQGVPV 36
AL+QNC DEQA+ LR+GYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQG PV
Sbjct: 442 ALLQNCATDEQAESLRTGYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQGTPV 501
Query: 35 PFD 27
PF+
Sbjct: 502 PFE 504
>ref|NP_001043438.1| Os01g0588800 [Oryza sativa Japonica Group]
gi|53792246|dbj|BAD52879.1| ATP synthase beta
subunit/transcription termination factor rho-like [Oryza
sativa Japonica Group] gi|113532969|dbj|BAF05352.1|
Os01g0588800 [Oryza sativa Japonica Group]
gi|215704112|dbj|BAG92952.1| unnamed protein product
[Oryza sativa Japonica Group] gi|222618761|gb|EEE54893.1|
hypothetical protein OsJ_02410 [Oryza sativa Japonica
Group]
Length = 504
Score = 705 bits (1820), Expect = 0.0
Identities = 341/423 (80%), Positives = 379/423 (89%), Gaps = 1/423 (0%)
Frame = -2
Query: 1292 TLSIDRSGLYNPPEHSHEPCSDSELVKQLKGIIKFRGGPISVAEYMEEVLTNPKAGFYMN 1113
+++IDRSGLYNPPEHSHEP SDSELVK LK IIKFR GPISVAEYMEEVLTNP++GFY+N
Sbjct: 85 SITIDRSGLYNPPEHSHEPSSDSELVKHLKSIIKFRSGPISVAEYMEEVLTNPQSGFYIN 144
Query: 1112 RDVFGSGGDFITSPEVSQMFGELIGVWTMCLWEQMGQPDKVNLIELGPGRGTLMADLLRG 933
RDVFG+ GDFITSPEVSQMFGE+ GVW MCLWEQMGQP+KVNLIELGPGRGTL+ADLLRG
Sbjct: 145 RDVFGTSGDFITSPEVSQMFGEMTGVWAMCLWEQMGQPEKVNLIELGPGRGTLLADLLRG 204
Query: 932 ASKFDKFTKSLRVHMVECSPTLQKLQYQTLKCADEDVGESNGDKRTISMFVGAPVSWHAT 753
+SKF FTK+L +++VECSPTLQK+QY TLKC DE +G+ RT+S GAPV WHA+
Sbjct: 205 SSKFVNFTKALNINLVECSPTLQKVQYNTLKCEDEPIGDKT---RTVSKLCGAPVHWHAS 261
Query: 752 LEQVPSGLPTIIIAHEFFDALPIHQFQKASRGWSEKMVDVAEDSSFQFVLSPQPTPATLS 573
LEQVPSGLPTIIIAHEF+DALPIHQFQKASRGW EKMVD+AEDSSF+FVLSPQPT + L
Sbjct: 262 LEQVPSGLPTIIIAHEFYDALPIHQFQKASRGWCEKMVDLAEDSSFRFVLSPQPTASLLF 321
Query: 572 LIKRCQWAAKEELAKLEQIEVCPKGMELTSNIAKRIGSDGGGALIIDYGLNGIVSDSLQA 393
L KRC WA+ EEL K+E IEVCPK ME+T IA RI SDGGGALIIDYG +GIVSDSLQA
Sbjct: 322 LSKRCGWASSEELEKVEHIEVCPKAMEITEQIADRISSDGGGALIIDYGKDGIVSDSLQA 381
Query: 392 IRKHKFVDILDDPGSADLSAYVDFASIRHSAEEASDNVSIHGPIIQSQFLGSLGINFRAE 213
IRKHKFV ILD+PGSADLSAYVDFASIRHSA+EASD++S+HGP+ QSQFLGSLGINFR E
Sbjct: 382 IRKHKFVHILDNPGSADLSAYVDFASIRHSAKEASDDISVHGPMTQSQFLGSLGINFRVE 441
Query: 212 ALVQNC-NDEQADLLRSGYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQGVPV 36
AL+QNC DEQA+ LR+GYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQG PV
Sbjct: 442 ALLQNCATDEQAESLRTGYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQGTPV 501
Query: 35 PFD 27
PF+
Sbjct: 502 PFE 504
>ref|XP_004162586.1| PREDICTED: protein midA, mitochondrial-like [Cucumis sativus]
Length = 493
Score = 703 bits (1815), Expect = 0.0
Identities = 332/421 (78%), Positives = 376/421 (89%)
Frame = -2
Query: 1292 TLSIDRSGLYNPPEHSHEPCSDSELVKQLKGIIKFRGGPISVAEYMEEVLTNPKAGFYMN 1113
T+SIDRSGL NPPEHSHEP SD+ELVK LKGIIKFRGGPIS+AEYMEEVLTNPKAGFY+N
Sbjct: 72 TISIDRSGLCNPPEHSHEPSSDTELVKHLKGIIKFRGGPISIAEYMEEVLTNPKAGFYIN 131
Query: 1112 RDVFGSGGDFITSPEVSQMFGELIGVWTMCLWEQMGQPDKVNLIELGPGRGTLMADLLRG 933
RDVFG+ GDFITSPEVSQMFGE++GVW MCLWEQMG+P+KVNL+ELGPGRGTLMADLLRG
Sbjct: 132 RDVFGAEGDFITSPEVSQMFGEMVGVWAMCLWEQMGRPEKVNLVELGPGRGTLMADLLRG 191
Query: 932 ASKFDKFTKSLRVHMVECSPTLQKLQYQTLKCADEDVGESNGDKRTISMFVGAPVSWHAT 753
ASK FT SL VH VECSP LQKLQ+ TLKC DE +K ++S G PVSWH T
Sbjct: 192 ASKLKNFTNSLHVHFVECSPALQKLQHSTLKCRDEANKADGVEKSSVSTLAGTPVSWHPT 251
Query: 752 LEQVPSGLPTIIIAHEFFDALPIHQFQKASRGWSEKMVDVAEDSSFQFVLSPQPTPATLS 573
LEQVPSGLPTIIIAHEF+DALP+HQFQ+ASRGWSEKMVDVAEDS+F+FVLSPQPTPA L
Sbjct: 252 LEQVPSGLPTIIIAHEFYDALPVHQFQRASRGWSEKMVDVAEDSTFKFVLSPQPTPAALY 311
Query: 572 LIKRCQWAAKEELAKLEQIEVCPKGMELTSNIAKRIGSDGGGALIIDYGLNGIVSDSLQA 393
L+KRC+W++ EE+AKL Q+E+CPK MELT IA+RI SDGGGALIIDYGLNG+VSDSLQA
Sbjct: 312 LMKRCKWSSSEEIAKLNQMEICPKAMELTQTIAERISSDGGGALIIDYGLNGVVSDSLQA 371
Query: 392 IRKHKFVDILDDPGSADLSAYVDFASIRHSAEEASDNVSIHGPIIQSQFLGSLGINFRAE 213
IRKHKFV+ILD+PGSADLSAYVDF SIRH+AEE S +V+++GP+ QSQFLGSLGINFR E
Sbjct: 372 IRKHKFVNILDNPGSADLSAYVDFPSIRHAAEEVSGDVAVYGPMTQSQFLGSLGINFRVE 431
Query: 212 ALVQNCNDEQADLLRSGYWRLVGDGEAPFWEGPDDQTPIGMGTRYLAMAIVNKKQGVPVP 33
AL++NC DEQA+ LR+GYWRLVG+GEAPFWEGPD++ PIGMGTRY+AMAIVNKK G PVP
Sbjct: 432 ALLENCTDEQAESLRTGYWRLVGEGEAPFWEGPDEEAPIGMGTRYMAMAIVNKKHGTPVP 491
Query: 32 F 30
F
Sbjct: 492 F 492