BLASTX nr result

ID: Coptis23_contig00017804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017804
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW66114.1| hypothetical protein ZEAMMB73_778765 [Zea mays]        112   1e-28
emb|CAN82596.1| hypothetical protein VITISV_020212 [Vitis vinifera]   130   1e-28
ref|NP_001143698.1| uncharacterized protein LOC100276434 [Zea ma...   112   2e-28
ref|NP_001046239.2| Os02g0203500 [Oryza sativa Japonica Group] g...   109   2e-28
dbj|BAD15512.1| hypothetical protein [Oryza sativa Japonica Grou...   109   2e-28

>gb|AFW66114.1| hypothetical protein ZEAMMB73_778765 [Zea mays]
          Length = 1041

 Score =  112 bits (281), Expect(2) = 1e-28
 Identities = 60/124 (48%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
 Frame = +1

Query: 169 LESQELAKDVEKSIESTAQNTPAWLRVNIEQGYRNASM*KVCSSKRVAIVSFS------L 330
           LE QEL + +   I STA++TP+ +RV  E GY  +   K CS  R  +          +
Sbjct: 130 LELQELTQSIGNVIASTARSTPSLVRVKSEHGYPVS---KKCSYVRELLERDGAHRVVLI 186

Query: 331 SGSQGIEKSCLARQVVADPPMKFINGAIELGFGQWCRRVACKGSKAEFQKRLARKLSKFL 510
            G  GI KSCLARQ+ +DPP+ F++GAIE+GFG+WC R AC GS++E+ KRLARK+  FL
Sbjct: 187 VGLSGIGKSCLARQIASDPPLSFVDGAIEIGFGRWCSRAACNGSRSEYHKRLARKICTFL 246

Query: 511 V*IG 522
           V IG
Sbjct: 247 VKIG 250



 Score = 39.3 bits (90), Expect(2) = 1e-28
 Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +2

Query: 50  NIRKANKIV-SRSRVKNFDTVVWSSVVGDPLSKVVNSIRYDLN 175
           N+ KA K++ S+ + K F  +V SSVVGDPL K    IR DLN
Sbjct: 85  NVAKARKVLGSKGKGKGFARLVRSSVVGDPLIKYARLIRDDLN 127


>emb|CAN82596.1| hypothetical protein VITISV_020212 [Vitis vinifera]
          Length = 1076

 Score =  130 bits (328), Expect = 1e-28
 Identities = 72/130 (55%), Positives = 87/130 (66%), Gaps = 6/130 (4%)
 Frame = +1

Query: 169 LESQELAKDVEKSIESTAQNTPAWLRVNIEQGYRNASM*KVCSSKRVAIVSFS------L 330
           LESQ LA  VEK IESTA+  P  L++  EQGY  +S    C+  R  +   S      +
Sbjct: 159 LESQRLAGSVEKVIESTARTIPVRLKIKPEQGYPISSK---CNFVRTLLEQDSSHRVILI 215

Query: 331 SGSQGIEKSCLARQVVADPPMKFINGAIELGFGQWCRRVACKGSKAEFQKRLARKLSKFL 510
            G  GI KSCLARQV ADPPMKF++GA+ELGFGQWC R AC  SK ++Q+RLARK+ KFL
Sbjct: 216 VGLSGIGKSCLARQVAADPPMKFVDGAVELGFGQWCSRAACNESKDKYQRRLARKICKFL 275

Query: 511 V*IGFGTKLR 540
           V IGF  K+R
Sbjct: 276 VQIGFWKKIR 285



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 72/207 (34%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
 Frame = +2

Query: 44  NPNIRKANKIVSRSRVKNFDTVVWSSVVGDPLSKVVNSIRYDLNHRNWQRMLKSL*SRQH 223
           +PNIRKA +IVS+SR KN   VVW+SV GDPL K+VNSIR DL   NW    + L     
Sbjct: 113 HPNIRKARRIVSKSRAKNLAKVVWTSVAGDPLEKLVNSIRDDL---NWWLESQRLAGSVE 169

Query: 224 KIHLLG*ESTLNKVTEMPVCEKFARARGLPSCHSHCRVLKAL-----KNHA*LVKSLLIL 388
           K+     EST   +   PV  K    +G P   S C  ++ L      +   L+  L  +
Sbjct: 170 KVI----ESTARTI---PVRLKIKPEQGYP-ISSKCNFVRTLLEQDSSHRVILIVGLSGI 221

Query: 389 Q*SLLMVPLNLD----LGSGAVELHV-----KGVKLNSRSVWQENC----------LNFW 511
             S L   +  D       GAVEL       +     S+  +Q             + FW
Sbjct: 222 GKSCLARQVAADPPMKFVDGAVELGFGQWCSRAACNESKDKYQRRLARKICKFLVQIGFW 281

Query: 512 CRLVLEQN*GRE*WDLQYVCCLLQEAL 592
            + + ++N G    DL+Y+CCLLQEAL
Sbjct: 282 -KKIRDENSG----DLEYMCCLLQEAL 303


>ref|NP_001143698.1| uncharacterized protein LOC100276434 [Zea mays]
           gi|195624968|gb|ACG34314.1| hypothetical protein [Zea
           mays]
          Length = 360

 Score =  112 bits (281), Expect(2) = 2e-28
 Identities = 60/124 (48%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
 Frame = +1

Query: 169 LESQELAKDVEKSIESTAQNTPAWLRVNIEQGYRNASM*KVCSSKRVAIVSFS------L 330
           LE QEL + +   I STA++TP+ +RV  E GY  +   K CS  R  +          +
Sbjct: 131 LELQELTQSIGNVIASTARSTPSLVRVKSEHGYPVS---KKCSYVRELLERDGAHRVVLI 187

Query: 331 SGSQGIEKSCLARQVVADPPMKFINGAIELGFGQWCRRVACKGSKAEFQKRLARKLSKFL 510
            G  GI KSCLARQ+ +DPP+ F++GAIE+GFG+WC R AC GS++E+ KRLARK+  FL
Sbjct: 188 VGLSGIGKSCLARQIASDPPLSFVDGAIEIGFGRWCSRAACNGSRSEYHKRLARKICTFL 247

Query: 511 V*IG 522
           V IG
Sbjct: 248 VKIG 251



 Score = 38.9 bits (89), Expect(2) = 2e-28
 Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = +2

Query: 50  NIRKANKIV--SRSRVKNFDTVVWSSVVGDPLSKVVNSIRYDLN 175
           N+ KA K++  S+ + K F  +V SSVVGDPL K    IR DLN
Sbjct: 85  NVAKARKVLQGSKGKGKGFARLVRSSVVGDPLIKYARLIRDDLN 128


>ref|NP_001046239.2| Os02g0203500 [Oryza sativa Japonica Group]
           gi|255670696|dbj|BAF08153.2| Os02g0203500 [Oryza sativa
           Japonica Group]
          Length = 1078

 Score =  109 bits (272), Expect(2) = 2e-28
 Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 6/124 (4%)
 Frame = +1

Query: 169 LESQELAKDVEKSIESTAQNTPAWLRVNIEQGYRNASM*KVCSSKRVAIVSFS------L 330
           LE Q+L + V   I STA++TP+ +RV  E GY  +   K CS  R  +++        +
Sbjct: 168 LELQKLTESVGNVIASTAKSTPSLVRVKSEHGYPVS---KKCSYVRELLINDGSHRVVLI 224

Query: 331 SGSQGIEKSCLARQVVADPPMKFINGAIELGFGQWCRRVACKGSKAEFQKRLARKLSKFL 510
            G  GI KSCLARQ+ +DPP  F++GAIEL FG+WC R AC G++ E+ KRL RK+ KFL
Sbjct: 225 VGLSGIGKSCLARQIASDPPGNFVDGAIELSFGRWCSRAACNGNRDEYHKRLVRKICKFL 284

Query: 511 V*IG 522
           V IG
Sbjct: 285 VQIG 288



 Score = 42.0 bits (97), Expect(2) = 2e-28
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +2

Query: 50  NIRKANKIVSRSR-VKNFDTVVWSSVVGDPLSKVVNSIRYDLN 175
           NI KA +++ + +  K    VVWSSV GDPL K V  IR DLN
Sbjct: 123 NITKARRVLKKGKGKKGLARVVWSSVTGDPLMKYVQLIRDDLN 165


>dbj|BAD15512.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|46390511|dbj|BAD15999.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|125581217|gb|EAZ22148.1|
           hypothetical protein OsJ_05811 [Oryza sativa Japonica
           Group]
          Length = 1040

 Score =  109 bits (272), Expect(2) = 2e-28
 Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 6/124 (4%)
 Frame = +1

Query: 169 LESQELAKDVEKSIESTAQNTPAWLRVNIEQGYRNASM*KVCSSKRVAIVSFS------L 330
           LE Q+L + V   I STA++TP+ +RV  E GY  +   K CS  R  +++        +
Sbjct: 130 LELQKLTESVGNVIASTAKSTPSLVRVKSEHGYPVS---KKCSYVRELLINDGSHRVVLI 186

Query: 331 SGSQGIEKSCLARQVVADPPMKFINGAIELGFGQWCRRVACKGSKAEFQKRLARKLSKFL 510
            G  GI KSCLARQ+ +DPP  F++GAIEL FG+WC R AC G++ E+ KRL RK+ KFL
Sbjct: 187 VGLSGIGKSCLARQIASDPPGNFVDGAIELSFGRWCSRAACNGNRDEYHKRLVRKICKFL 246

Query: 511 V*IG 522
           V IG
Sbjct: 247 VQIG 250



 Score = 42.0 bits (97), Expect(2) = 2e-28
 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +2

Query: 50  NIRKANKIVSRSR-VKNFDTVVWSSVVGDPLSKVVNSIRYDLN 175
           NI KA +++ + +  K    VVWSSV GDPL K V  IR DLN
Sbjct: 85  NITKARRVLKKGKGKKGLARVVWSSVTGDPLMKYVQLIRDDLN 127


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