BLASTX nr result

ID: Coptis23_contig00017803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017803
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34406.1| unnamed protein product [Thellungiella halophila]     114   8e-24
ref|XP_003518461.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...   110   9e-23
ref|NP_195530.2| FAR1-related sequence 9 [Arabidopsis thaliana] ...   109   3e-22
emb|CAB37557.1| hypothetical protein [Arabidopsis thaliana] gi|7...   109   3e-22
ref|XP_003545179.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...   108   3e-22

>dbj|BAJ34406.1| unnamed protein product [Thellungiella halophila]
          Length = 854

 Score =  114 bits (285), Expect = 8e-24
 Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   YEKAIACRREVEHNEDIRSQQTRPVLKLDVPMEQQAADVYTGSVFKEFHKEFCESFNYIA 181
           YE+A+    E+E + DI +  T PVLK   PME QAA+++T  +F +F +E  E+F Y A
Sbjct: 445 YERAMESWFEMEIDADIDTVNTPPVLKTPSPMENQAANLFTRKIFAKFQEELVETFAYTA 504

Query: 182 EETARVGTNWTYAVSRW-GQNRSCLVNLNSCNNDIRVICDCQRYEIMGILCRHIFKVFTV 358
                 GTN T+ V+++   N++ LV    C  ++R  C CQ +E  GILCRH+  VFTV
Sbjct: 505 NRIDDDGTNSTFRVAKFENDNKAYLVTF--CYPEMRANCSCQMFEHSGILCRHVLTVFTV 562

Query: 359 RNIMLIPDVYFKRRWTKKAK 418
            NI+ +P  Y  RRWT+ AK
Sbjct: 563 TNILTLPPQYILRRWTRNAK 582


>ref|XP_003518461.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 879

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/140 (40%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   YEKAIACRREVEHNEDIRSQQTRPVLKLDVPMEQQAADVYTGSVFKEFHKEFCESFNYIA 181
           YE+A+ C  E E   D  +  T PVLK   PME+QAA++YT  +F +F +E  E+F Y A
Sbjct: 468 YEQALECWFEKELESDYETICTTPVLKTPSPMEKQAANLYTRKIFSKFQEELVETFAYTA 527

Query: 182 EETARVGTNWTYAVSRWGQNRSC-LVNLNSCNNDIRVICDCQRYEIMGILCRHIFKVFTV 358
                 G N  + V+++  ++   +V LN   +++R  C CQ +E  GILCRH+  VFTV
Sbjct: 528 NRIEEDGENSIFRVAKFEDDQKAYVVTLNL--SELRANCSCQMFEYSGILCRHVLTVFTV 585

Query: 359 RNIMLIPDVYFKRRWTKKAK 418
            N++ +P  Y  +RWT+ AK
Sbjct: 586 TNVLTLPSHYILKRWTRNAK 605


>ref|NP_195530.2| FAR1-related sequence 9 [Arabidopsis thaliana]
           gi|334302810|sp|Q9SZL7.2|FRS9_ARATH RecName:
           Full=Protein FAR1-RELATED SEQUENCE 9
           gi|332661489|gb|AEE86889.1| FAR1-related sequence 9
           [Arabidopsis thaliana]
          Length = 545

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   YEKAIACRREVEHNEDIRSQQTRPVLKLDVPMEQQAADVYTGSVFKEFHKEFCESFNYIA 181
           YEKAI   RE E   D  +  + PV+K   PME+QAA +YT + F +F +EF E+    A
Sbjct: 262 YEKAIDSWREKELKADYEATNSTPVMKTPSPMEKQAASLYTRAAFIKFQEEFVETLAIPA 321

Query: 182 EETARVGTNWTYAVSRWGQ-NRSCLVNLNSCNNDIRVICDCQRYEIMGILCRHIFKVFTV 358
              +  GT+ TY V+++G+ ++   V+ +S   +++  C CQ +E  GI+CRHI  VF+ 
Sbjct: 322 NIISDSGTHTTYRVAKFGEVHKGHTVSFDSL--EVKANCSCQMFEYSGIICRHILAVFSA 379

Query: 359 RNIMLIPDVYFKRRWTKKAK 418
           +N++ +P  Y  RRWTK+AK
Sbjct: 380 KNVLALPSRYLLRRWTKEAK 399


>emb|CAB37557.1| hypothetical protein [Arabidopsis thaliana]
           gi|7270801|emb|CAB80482.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 531

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   YEKAIACRREVEHNEDIRSQQTRPVLKLDVPMEQQAADVYTGSVFKEFHKEFCESFNYIA 181
           YEKAI   RE E   D  +  + PV+K   PME+QAA +YT + F +F +EF E+    A
Sbjct: 248 YEKAIDSWREKELKADYEATNSTPVMKTPSPMEKQAASLYTRAAFIKFQEEFVETLAIPA 307

Query: 182 EETARVGTNWTYAVSRWGQ-NRSCLVNLNSCNNDIRVICDCQRYEIMGILCRHIFKVFTV 358
              +  GT+ TY V+++G+ ++   V+ +S   +++  C CQ +E  GI+CRHI  VF+ 
Sbjct: 308 NIISDSGTHTTYRVAKFGEVHKGHTVSFDSL--EVKANCSCQMFEYSGIICRHILAVFSA 365

Query: 359 RNIMLIPDVYFKRRWTKKAK 418
           +N++ +P  Y  RRWTK+AK
Sbjct: 366 KNVLALPSRYLLRRWTKEAK 385


>ref|XP_003545179.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 849

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   YEKAIACRREVEHNEDIRSQQTRPVLKLDVPMEQQAADVYTGSVFKEFHKEFCESFNYIA 181
           YE+A+ C  E E   D  +  T PVLK   PME+QAA++YT  +F +F +E  E+F Y A
Sbjct: 439 YEQALECWFEKELESDYDTICTTPVLKTPSPMEKQAANLYTRKIFSKFQEELVETFAYTA 498

Query: 182 EETARVGTNWTYAVSRWGQNRSC-LVNLNSCNNDIRVICDCQRYEIMGILCRHIFKVFTV 358
                 G N  + V+++  ++   +V LN   +++R  C CQ +E  GILCRH+  VFTV
Sbjct: 499 NRIEEDGENSIFRVAKFEDDQKVYIVTLNL--SELRANCSCQMFEYSGILCRHVLTVFTV 556

Query: 359 RNIMLIPDVYFKRRWTKKAK 418
            N++ +P  Y  +RWT+ +K
Sbjct: 557 TNVLTLPSHYILKRWTRNSK 576


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