BLASTX nr result
ID: Coptis23_contig00017798
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00017798 (704 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia s... 113 3e-23 ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera] gi|... 102 7e-20 ref|XP_002519059.1| conserved hypothetical protein [Ricinus comm... 102 1e-19 ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max] 100 2e-19 ref|XP_003566876.1| PREDICTED: uncharacterized protein LOC100840... 95 1e-17 >gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia sinensis] Length = 236 Score = 113 bits (283), Expect = 3e-23 Identities = 68/192 (35%), Positives = 90/192 (46%), Gaps = 10/192 (5%) Frame = +3 Query: 36 DSPPPGWES---EKQEANSDSPPPPGFESNENN-------SPSEKQSSTLVVVVDSNKKN 185 D PPPGW +K+E + D PPPG++S + +P+ V N + Sbjct: 50 DGPPPGWTQIAVKKEEEDDDDGPPPGWQSIPPSQPPTITPAPTTPPPPPAVASGSGNAAH 109 Query: 186 YSPSQHSPLPPGWEEPTTSPCQQHXXXXXXXXXXXXXXXXXXGIPTREMGQMICGVCRSL 365 Q P G + + QQ EMGQM+CG C+ L Sbjct: 110 TQLQQQPPKQEGSAKAARTQLQQELPKQEAV----------------EMGQMVCGSCQEL 153 Query: 366 ISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXXXXXXXXXXXTQIG 545 +SYP+GA V+C CQTVN+ LE +VG VKCG C+VLLMY Y T+IG Sbjct: 154 LSYPRGARLVRCLCCQTVNYCLEEHEVGQVKCGGCAVLLMYPYGAPFVKCSSCCFVTEIG 213 Query: 546 VDNKRPLISVQQ 581 N+RP +SVQQ Sbjct: 214 EHNRRPPLSVQQ 225 >ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera] gi|302144197|emb|CBI23324.3| unnamed protein product [Vitis vinifera] Length = 141 Score = 102 bits (254), Expect = 7e-20 Identities = 52/93 (55%), Positives = 61/93 (65%), Gaps = 1/93 (1%) Frame = +3 Query: 327 EMGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXX 506 EM QM+CG CR L+SYP+G V+C CQTVN VLEA QVG VKCGSC+VLLMY Y Sbjct: 45 EMAQMVCGSCRRLLSYPQGTRHVECSCCQTVNFVLEAHQVGQVKCGSCAVLLMYPYGAPS 104 Query: 507 XXXXXXXXXTQIGVDNKRPLISVQQVHS-PSHN 602 T+IGV N+R +SVQQ H P H+ Sbjct: 105 VRCSSCRFVTEIGVHNRRLPLSVQQGHQLPLHS 137 >ref|XP_002519059.1| conserved hypothetical protein [Ricinus communis] gi|223541722|gb|EEF43270.1| conserved hypothetical protein [Ricinus communis] Length = 142 Score = 102 bits (253), Expect = 1e-19 Identities = 48/93 (51%), Positives = 58/93 (62%) Frame = +3 Query: 318 PTREMGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYE 497 P+ EM QM+CG CR+L+SYP+GA V+C CQ VN VLEA +VG V CG C +LLMY Y Sbjct: 47 PSSEMAQMVCGSCRTLLSYPRGARHVQCSSCQMVNFVLEAHEVGQVNCGKCEILLMYPYP 106 Query: 498 XXXXXXXXXXXXTQIGVDNKRPLISVQQVHSPS 596 T+IG NKRP SV Q H P+ Sbjct: 107 ASSVRCSSCCSVTEIGAHNKRPPWSVIQGHPPN 139 >ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max] Length = 128 Score = 100 bits (250), Expect = 2e-19 Identities = 53/90 (58%), Positives = 58/90 (64%), Gaps = 2/90 (2%) Frame = +3 Query: 318 PTREMG--QMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYK 491 P R G QM+CG CR L+SYP+GA VKC CQTVN VLEA QVG VKCGSC+VLLMY Sbjct: 29 PPRPSGWAQMVCGSCRRLLSYPRGAKHVKCSCCQTVNIVLEADQVGQVKCGSCAVLLMYP 88 Query: 492 YEXXXXXXXXXXXXTQIGVDNKRPLISVQQ 581 Y T+IG NKRP SVQQ Sbjct: 89 YGASQVRCSSCRFVTEIGAHNKRPPWSVQQ 118 >ref|XP_003566876.1| PREDICTED: uncharacterized protein LOC100840817 [Brachypodium distachyon] Length = 939 Score = 95.1 bits (235), Expect = 1e-17 Identities = 59/182 (32%), Positives = 83/182 (45%) Frame = +3 Query: 48 PGWESEKQEANSDSPPPPGFESNENNSPSEKQSSTLVVVVDSNKKNYSPSQHSPLPPGWE 227 P +S E+ +PP ++ + N E ++ L + + + QH PP + Sbjct: 762 PATKSVAVESEERAPPQLALQAVDTNM--ECATTLLTLSKKEGEDSLPQPQH---PPCSQ 816 Query: 228 EPTTSPCQQHXXXXXXXXXXXXXXXXXXGIPTREMGQMICGVCRSLISYPKGAGRVKCPG 407 +PC +EMGQM+CG CR L++YP+GA V+C G Sbjct: 817 TVQAAPCSLEALELLPPPPPPFL--------NKEMGQMVCGCCRELLAYPRGAVHVQCAG 868 Query: 408 CQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXXXXXXXXXXXTQIGVDNKRPLISVQQVH 587 C T+N VLEA +VG V CG C LLMY + T+IG RP ISV+QV Sbjct: 869 CLTINLVLEAHEVGKVHCGRCETLLMYPFGAPAVKCSLCLFVTEIGERKVRPRISVEQVV 928 Query: 588 SP 593 P Sbjct: 929 PP 930