BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017795
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   464   e-128
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   463   e-128
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   461   e-127
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   452   e-125
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...   446   e-123

>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score =  464 bits (1194), Expect = e-128
 Identities = 237/336 (70%), Positives = 272/336 (80%), Gaps = 7/336 (2%)
 Frame = -1

Query: 988 MGQSTSTPGIRSA--SKRSSIIVNHQMMNKSTAVIAP-----EENFFTLVNRDIISDLPD 830
           MGQS ST  I S   S RSS   +H+  +K T  I P     +  F      D ISDLPD
Sbjct: 1   MGQSASTALITSRRDSNRSS---SHRSKSKFTVPIMPVQVEEQTEFIFCEGPDYISDLPD 57

Query: 829 ELLANIFHYLNSSDRNKCSLVCRSWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSK 650
           E LA IF  LNS DR  CSLVCR W  IEGQSR RLSL+A+SDL+  + +LFSRFDSV+K
Sbjct: 58  ECLACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRFDSVTK 117

Query: 649 LALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGS 470
           LALKCDRRS SIGDEAL  IS RCRNLTRLKLR+CRELTDAGM AFAKNCK LKKLSCGS
Sbjct: 118 LALKCDRRSTSIGDEALVAISSRCRNLTRLKLRSCRELTDAGMAAFAKNCKALKKLSCGS 177

Query: 469 CTFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGIAALSLKIICLKELYNGQC 290
           CTFG +GMNAILD+C+ LEELS+KRLRG+TDG+ AEP+GPG+AA SLK ICLKELYNGQC
Sbjct: 178 CTFGARGMNAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKELYNGQC 237

Query: 289 FGPLIAGAKNLRCLKLFRCSGDWDVLLESITGRVSGLVEVHLERLQVSDRGLEAISSCLD 110
           FGPLI G+KNL+ LKLFRCSGDWD LL+ I+ RV+G+VE+HLERLQVSD GL AIS+CL+
Sbjct: 238 FGPLIIGSKNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAAISNCLN 297

Query: 109 LEILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 2
           LEILHLVKTPECT+ G+VSIA+RC++LRK+H+DGWK
Sbjct: 298 LEILHLVKTPECTDTGLVSIAERCRLLRKLHVDGWK 333


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
            skip-2, putative [Ricinus communis]
          Length = 536

 Score =  463 bits (1191), Expect = e-128
 Identities = 236/339 (69%), Positives = 280/339 (82%), Gaps = 10/339 (2%)
 Frame = -1

Query: 988  MGQSTSTPGIRSASKRSSIIVNHQMMNKSTAVIAP--------EENFFTLVNR--DIISD 839
            MGQS+S+  I   ++R SI   ++  +KSTA+I+P        +++   ++N   D ISD
Sbjct: 1    MGQSSSSTAI--LTRRESI---YRSKSKSTALISPMQTEEPNDKDDVVLIINESPDYISD 55

Query: 838  LPDELLANIFHYLNSSDRNKCSLVCRSWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDS 659
            LPDE LA IF  L+ SDR +CSLVCR W  IEGQSR RLSL A+SDL+  I  LF+RFD+
Sbjct: 56   LPDECLACIFQSLSPSDRQRCSLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALFTRFDA 115

Query: 658  VSKLALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLS 479
            V+KLAL+CDR+S SIGDEAL  ISLRCRNLTRLKLR+CR++TDAGM AFAKNCKGLKKLS
Sbjct: 116  VTKLALRCDRKSASIGDEALEAISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKGLKKLS 175

Query: 478  CGSCTFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGIAALSLKIICLKELYN 299
            CGSCTFG KGMNA+LD+C+ LEELS+KRLRG+TDG+ AEPIGPG+AA SLK ICLKELYN
Sbjct: 176  CGSCTFGAKGMNAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICLKELYN 235

Query: 298  GQCFGPLIAGAKNLRCLKLFRCSGDWDVLLESITGRVSGLVEVHLERLQVSDRGLEAISS 119
            GQCFGPLI G+KNLR LKLFRCSGDWD LL+ I+ RV+G+VE+HLERLQVSD GL AIS+
Sbjct: 236  GQCFGPLIIGSKNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGLSAISN 295

Query: 118  CLDLEILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 2
            CLDLEILHLVKTPECTN G+ SIA+RCK+LRK+HIDGWK
Sbjct: 296  CLDLEILHLVKTPECTNLGLGSIAERCKLLRKLHIDGWK 334


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
           gi|222842891|gb|EEE80438.1| f-box family protein
           [Populus trichocarpa]
          Length = 533

 Score =  461 bits (1185), Expect = e-127
 Identities = 235/334 (70%), Positives = 273/334 (81%), Gaps = 5/334 (1%)
 Frame = -1

Query: 988 MGQSTSTPGIRSASKRSSIIVNHQMMNKSTAVIAP----EENFFTLVNR-DIISDLPDEL 824
           MGQ+TST  I   S+R S + + +  +K T  I P    E+  + LV   D ISDLPDE 
Sbjct: 1   MGQTTSTALI--TSRRDSNLSSQRSKSKFTVPIIPMQVEEQTEYVLVEAPDYISDLPDEC 58

Query: 823 LANIFHYLNSSDRNKCSLVCRSWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKLA 644
           LA IF  L+S DR  CSLVCR W  IEGQSR RLSL+A+SDL+  +  LFSRFD+V+KLA
Sbjct: 59  LACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRFDAVTKLA 118

Query: 643 LKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCT 464
           LKCDRRSVSIGDEAL  IS+RCRNLTRLKLRACRE+TDAGM AFAKNCK LKK SCGSC 
Sbjct: 119 LKCDRRSVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCKALKKFSCGSCA 178

Query: 463 FGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGIAALSLKIICLKELYNGQCFG 284
           FG KGMNA+LD+C+ LE+LSVKRLRG+TDG+ AEPIGPG+AA SLK ICLKELYNGQCFG
Sbjct: 179 FGAKGMNAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTICLKELYNGQCFG 238

Query: 283 PLIAGAKNLRCLKLFRCSGDWDVLLESITGRVSGLVEVHLERLQVSDRGLEAISSCLDLE 104
           PLI G+KNL+ LKLFRCSGDWD LL+ I  RV+G+VE+HLERLQVSD GL AIS+CL+LE
Sbjct: 239 PLIIGSKNLKTLKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTGLVAISNCLNLE 298

Query: 103 ILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 2
           ILHLVKTPECT+ G+VSIA+RC++LRK+HIDGWK
Sbjct: 299 ILHLVKTPECTDIGLVSIAERCRLLRKLHIDGWK 332


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  452 bits (1162), Expect = e-125
 Identities = 236/336 (70%), Positives = 269/336 (80%), Gaps = 7/336 (2%)
 Frame = -1

Query: 988 MGQSTSTPGIRSASKRSSIIVNHQMMNKSTAVIAP-----EENFFTLVN--RDIISDLPD 830
           MGQS S+  I S    +    +H+   KSTA+I+P      ++   +++   D ISDLPD
Sbjct: 1   MGQSASSAAILSRRDSNH---SHRSKIKSTALISPMHLDETDDVQEIIHGASDFISDLPD 57

Query: 829 ELLANIFHYLNSSDRNKCSLVCRSWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSK 650
           E LA IF  L+S DR  CSLVCR WF +EGQSR RLSL A +DL + I  LF+RFD+V+K
Sbjct: 58  ECLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFDAVTK 117

Query: 649 LALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGS 470
           LALKCDRRS SI D++L LISLRCRNLTRLKLRACRELTD GM AFAKNCKGLKKLSCGS
Sbjct: 118 LALKCDRRSTSIRDDSLILISLRCRNLTRLKLRACRELTDVGMAAFAKNCKGLKKLSCGS 177

Query: 469 CTFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGIAALSLKIICLKELYNGQC 290
           CTFG KGMNA+LD+CS LEELSVKRLRG+TD S AEPIGPGIA  SLK ICLK+LYN QC
Sbjct: 178 CTFGAKGMNAVLDNCSALEELSVKRLRGITD-STAEPIGPGIAGSSLKTICLKDLYNAQC 236

Query: 289 FGPLIAGAKNLRCLKLFRCSGDWDVLLESITGRVSGLVEVHLERLQVSDRGLEAISSCLD 110
           FGPL+ GAK+LR LKLFRCSGDWD LL  I  RV+GLVEVHLERLQVSD GL AIS+CLD
Sbjct: 237 FGPLLIGAKSLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSAISNCLD 296

Query: 109 LEILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 2
           LEILHLVKTPECTN GIV++A+RCK+LRK+HIDGWK
Sbjct: 297 LEILHLVKTPECTNLGIVALAERCKLLRKLHIDGWK 332


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score =  446 bits (1146), Expect = e-123
 Identities = 234/335 (69%), Positives = 264/335 (78%), Gaps = 6/335 (1%)
 Frame = -1

Query: 988  MGQSTSTPGIRSASKRSSIIVNHQMMNKSTAVIAP---EENF-FTLVNRDI--ISDLPDE 827
            MGQS ST  I S S R      H+  +KS   I     EEN  F  ++ D+  ISDLPDE
Sbjct: 1    MGQSASTSAISSGSSRRGSNHPHRSRSKSMVQIPSMQVEENVQFRQIDEDLDYISDLPDE 60

Query: 826  LLANIFHYLNSSDRNKCSLVCRSWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKL 647
             LA IF  L S DR +CSLVCR W  IEGQ+R RLSL+A SDL+T +  LFSRFD+V+KL
Sbjct: 61   CLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLSLNAHSDLLTVVPSLFSRFDAVTKL 120

Query: 646  ALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSC 467
            ALKCDRRSVSIGD+AL LISL CRNLTRLKLRACRELTDAGM  FAKNCKGLKKLSCGSC
Sbjct: 121  ALKCDRRSVSIGDDALILISLGCRNLTRLKLRACRELTDAGMGVFAKNCKGLKKLSCGSC 180

Query: 466  TFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGIAALSLKIICLKELYNGQCF 287
            TFG KGM+A+LD+CS LEELSVKRLRG++DGS  + IGPG+AA SLK ICLKE YNGQCF
Sbjct: 181  TFGAKGMSAVLDNCSALEELSVKRLRGISDGSAVDQIGPGVAASSLKTICLKEQYNGQCF 240

Query: 286  GPLIAGAKNLRCLKLFRCSGDWDVLLESITGRVSGLVEVHLERLQVSDRGLEAISSCLDL 107
             PLI GAKNLR LKLFRCSGD D LL+ +  R + +VE+HLERLQVSD GL AIS  LDL
Sbjct: 241  WPLIIGAKNLRTLKLFRCSGDCDNLLQLVANRTTSMVEIHLERLQVSDLGLVAISHFLDL 300

Query: 106  EILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWK 2
            EILHLVKT ECTNAG+VS+A+RCK+LRK+HIDGWK
Sbjct: 301  EILHLVKTSECTNAGLVSVAERCKLLRKLHIDGWK 335