BLASTX nr result

ID: Coptis23_contig00017790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017790
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149642.1| PREDICTED: lysine--tRNA ligase-like [Cucumis...    92   4e-17
ref|XP_002523412.1| lysyl-tRNA synthetase, putative [Ricinus com...    85   5e-15
ref|XP_002285737.1| PREDICTED: lysyl-tRNA synthetase [Vitis vini...    84   9e-15
ref|XP_002884969.1| hypothetical protein ARALYDRAFT_478735 [Arab...    83   3e-14
ref|NP_187958.1| Lysyl-tRNA synthetase, class II [Arabidopsis th...    81   8e-14

>ref|XP_004149642.1| PREDICTED: lysine--tRNA ligase-like [Cucumis sativus]
           gi|449515797|ref|XP_004164934.1| PREDICTED: lysine--tRNA
           ligase-like [Cucumis sativus]
          Length = 603

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = +2

Query: 137 DKEAVRAIRLKKVEELKSKGYEPYAYTWDRTHSANQLQLLYTHLANGEE 283
           D+EAVRAIRLKKVEEL+SKG+EPYAYTWDRTH+ANQLQ LY HL NGEE
Sbjct: 81  DREAVRAIRLKKVEELRSKGFEPYAYTWDRTHTANQLQELYKHLGNGEE 129


>ref|XP_002523412.1| lysyl-tRNA synthetase, putative [Ricinus communis]
           gi|223537362|gb|EEF38991.1| lysyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 585

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = +2

Query: 137 DKEAVRAIRLKKVEELKSKGYEPYAYTWDRTHSANQLQLLYTHLANGEE 283
           D+EAVRAIRLKKVEEL+SKG EPYAY W+RTH+ANQLQ +Y +LANGEE
Sbjct: 64  DREAVRAIRLKKVEELRSKGLEPYAYKWERTHTANQLQEIYRYLANGEE 112


>ref|XP_002285737.1| PREDICTED: lysyl-tRNA synthetase [Vitis vinifera]
           gi|297746486|emb|CBI16542.3| unnamed protein product
           [Vitis vinifera]
          Length = 592

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = +2

Query: 137 DKEAVRAIRLKKVEELKSKGYEPYAYTWDRTHSANQLQLLYTHLANGEE 283
           D++A+RAIRLKKVEEL++KG EPYAY WDRTH+ANQLQ +Y HL NGEE
Sbjct: 70  DRDAIRAIRLKKVEELRNKGLEPYAYKWDRTHTANQLQDIYRHLGNGEE 118


>ref|XP_002884969.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
           lyrata] gi|297330809|gb|EFH61228.1| hypothetical protein
           ARALYDRAFT_478735 [Arabidopsis lyrata subsp. lyrata]
          Length = 603

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/49 (73%), Positives = 44/49 (89%)
 Frame = +2

Query: 137 DKEAVRAIRLKKVEELKSKGYEPYAYTWDRTHSANQLQLLYTHLANGEE 283
           D+EA+R+IRLKKVEEL+ +G EPYAY W++THSANQLQ +Y HLANGEE
Sbjct: 81  DREAIRSIRLKKVEELRGQGLEPYAYKWEKTHSANQLQEIYKHLANGEE 129


>ref|NP_187958.1| Lysyl-tRNA synthetase, class II [Arabidopsis thaliana]
           gi|9280301|dbj|BAB01756.1| lysyl-tRNA synthetase
           [Arabidopsis thaliana] gi|26983796|gb|AAN86150.1|
           putative lysyl-tRNA synthetase [Arabidopsis thaliana]
           gi|332641843|gb|AEE75364.1| Lysyl-tRNA synthetase, class
           II [Arabidopsis thaliana]
          Length = 602

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/49 (71%), Positives = 44/49 (89%)
 Frame = +2

Query: 137 DKEAVRAIRLKKVEELKSKGYEPYAYTWDRTHSANQLQLLYTHLANGEE 283
           D+EA+R+IRLKKVEEL+ +G EPYAY W+++HSANQLQ +Y HLANGEE
Sbjct: 80  DREAIRSIRLKKVEELRGQGLEPYAYKWEKSHSANQLQEIYKHLANGEE 128


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