BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017786
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244...   355   1e-95
ref|XP_002511611.1| conserved hypothetical protein [Ricinus comm...   343   5e-92
ref|NP_191599.1| Mitochondrial transcription termination factor ...   343   5e-92
ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arab...   341   2e-91
emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]   327   5e-87

>ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
          Length = 561

 Score =  355 bits (912), Expect = 1e-95
 Identities = 168/298 (56%), Positives = 224/298 (75%)
 Frame = +2

Query: 5    IGKRWDVFLECSEEVLVTKVEYFKRMNIKEEDVGLFLLRCPEVLQFDLESPVFSAMRFLK 184
            +G+  ++FLE SEEVLV K+++F R+N+++  +GL LL CPE+L FDLE+PV S M FLK
Sbjct: 259  MGRSRNIFLEYSEEVLVRKMDFFCRLNVRKAGIGLLLLECPEILSFDLEAPVISVMGFLK 318

Query: 185  HFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDS 364
            HFGL  ++  ++A  YPYVLG+N++ANLPH MRA+D HEWFF  + NGNH LL +  +  
Sbjct: 319  HFGLGLQKSKSVARMYPYVLGRNKMANLPHVMRALDLHEWFFGMMKNGNHRLLGNYVLSH 378

Query: 365  QDEDFEKDFKDCLERFRSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVR 544
             DED ++D++  LE+ +S R+  H + KL+FLH IG+GENL+T+KVL ++HGT SELQ R
Sbjct: 379  PDEDLDEDYRVGLEKIQSSRTPAHTINKLNFLHGIGYGENLLTMKVLEHVHGTSSELQER 438

Query: 545  FNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLDVFPGFLCFD 724
            FN LL  G+ FS+L  MI    K+LNQKPE+L+ KV+FL  E+G+S+Q+LDVFP +LCF+
Sbjct: 439  FNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPAYLCFN 498

Query: 725  LENRMKPRLRIHMWLLENGFHVREYSLASIIATSENRFIDRLVGIHPTVLKQWFERFS 898
            L+NR+KPR R H+WL ENG   + YSLAS+IATSE  FI RL GIHP V K W E FS
Sbjct: 499  LDNRIKPRYRCHVWLAENGLCTKNYSLASMIATSEKSFIARLYGIHPAVPKLWLECFS 556


>ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis]
            gi|223548791|gb|EEF50280.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 561

 Score =  343 bits (880), Expect = 5e-92
 Identities = 162/306 (52%), Positives = 219/306 (71%)
 Frame = +2

Query: 5    IGKRWDVFLECSEEVLVTKVEYFKRMNIKEEDVGLFLLRCPEVLQFDLESPVFSAMRFLK 184
            IGK   +F++C  EVL+ K EYF R  + + DVG+ LL+ PE+L FDLE+P+ S    L+
Sbjct: 249  IGKSKTIFIDCPIEVLIKKTEYFCRFGVSKVDVGMLLLQKPELLCFDLETPLISVKGILE 308

Query: 185  HFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDS 364
            HFG + EEL+ +  +YP+V+G+N++ANLPH MRA+D H WFF+KI +G H LLA   +  
Sbjct: 309  HFGFNVEELEVVIHKYPHVMGRNKMANLPHVMRAMDLHLWFFNKIKDGYHELLASYALRD 368

Query: 365  QDEDFEKDFKDCLERFRSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVR 544
             DED +K+F D LER R  R+  H ++KLDF+H IGFGEN +T+KVL++LHG+ SELQ R
Sbjct: 369  PDEDLDKEFSDSLERIRVSRTPTHTMSKLDFVHGIGFGENALTVKVLTHLHGSSSELQER 428

Query: 545  FNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLDVFPGFLCFD 724
            F+ LL  G+ FS+L  MI+ +PK+LNQ+ E+L+ KV+FLC E+G S+Q L +FP FLCF+
Sbjct: 429  FDCLLRLGIGFSKLCTMIRTMPKILNQQSEILEQKVNFLCQEMGSSLQELYIFPAFLCFN 488

Query: 725  LENRMKPRLRIHMWLLENGFHVREYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSK 904
            LENR+KPR R HMWL E G   + YS++SI+ATSE  F+ RL GIHP V K WFE    K
Sbjct: 489  LENRIKPRYRFHMWLTEKGVSTQTYSISSIVATSEKNFVARLYGIHPAVPKHWFEFLMPK 548

Query: 905  NHSYSP 922
              +  P
Sbjct: 549  KPTGVP 554


>ref|NP_191599.1| Mitochondrial transcription termination factor family protein
            [Arabidopsis thaliana] gi|7287988|emb|CAB81826.1|
            putative protein [Arabidopsis thaliana]
            gi|332646534|gb|AEE80055.1| Mitochondrial transcription
            termination factor family protein [Arabidopsis thaliana]
          Length = 558

 Score =  343 bits (880), Expect = 5e-92
 Identities = 159/294 (54%), Positives = 211/294 (71%)
 Frame = +2

Query: 23   VFLECSEEVLVTKVEYFKRMNIKEEDVGLFLLRCPEVLQFDLESPVFSAMRFLKHFGLSD 202
            +FLE SEE L+ K  YF R  + +ED  L +LR P ++ FDLE PV S    LKHFGL  
Sbjct: 258  LFLEYSEEALMNKAGYFCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQ 317

Query: 203  EELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDSQDEDFE 382
            +E+DA+A +YPYV G+N+L NLP+ +RAID HE  FD + NGNHHLLA   +   DED E
Sbjct: 318  DEVDAVAQKYPYVFGRNQLKNLPYVLRAIDLHERIFDILKNGNHHLLASYTLMDPDEDLE 377

Query: 383  KDFKDCLERFRSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVRFNYLLG 562
            +++++ LE  ++ R+ +H + KLDFLHEIGFGEN +T+KVL ++HGT  EL  RF  LL 
Sbjct: 378  REYQEGLEELQNSRTKRHNIQKLDFLHEIGFGENGITMKVLQHVHGTAVELHDRFQILLN 437

Query: 563  RGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLDVFPGFLCFDLENRMK 742
             G+ FS++  +I+  PK+LNQKP  ++DK+ FLC E+G S+ +L+VFP +LCFDLENR+ 
Sbjct: 438  SGIIFSKICMLIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRIS 497

Query: 743  PRLRIHMWLLENGFHVREYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSK 904
            PR R H WL+E GF  + YS+ASI+ATSE  FI RL GIHP + K WFERFSS+
Sbjct: 498  PRFRFHKWLVEKGFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHWFERFSSR 551


>ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
            lyrata] gi|297322390|gb|EFH52811.1| hypothetical protein
            ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  341 bits (875), Expect = 2e-91
 Identities = 159/300 (53%), Positives = 215/300 (71%)
 Frame = +2

Query: 5    IGKRWDVFLECSEEVLVTKVEYFKRMNIKEEDVGLFLLRCPEVLQFDLESPVFSAMRFLK 184
            +G+   +FLE SEE LV K EYF R  +++EDV L +LR P ++ FDLE PV S    LK
Sbjct: 252  MGRNKSLFLEYSEEALVKKAEYFCRFGVRKEDVALLILRNPAIMNFDLEKPVISVTGMLK 311

Query: 185  HFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDS 364
            HFGL  +E+DA+A +YPYVLG+N+L NLP+ +RAID HE   D + NG+HHLLA   +  
Sbjct: 312  HFGLRQDEVDAVAQKYPYVLGRNKLKNLPYVLRAIDLHERIVDILKNGSHHLLASYSVMD 371

Query: 365  QDEDFEKDFKDCLERFRSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVR 544
              ED ++++++ LE  ++ R+  H + KLDFLHEIGFGEN +T+KVL ++HGT  ELQ R
Sbjct: 372  PYEDLDREYQEGLEELQNSRTKTHNIQKLDFLHEIGFGENGMTMKVLQHVHGTAVELQDR 431

Query: 545  FNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLDVFPGFLCFD 724
            F  LL  G+ FS++  +I+  PK+LNQKP  ++DK+ FLC E+G S+ +LDVFP +LCFD
Sbjct: 432  FQILLDSGIIFSKICLLIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLDVFPAYLCFD 491

Query: 725  LENRMKPRLRIHMWLLENGFHVREYSLASIIATSENRFIDRLVGIHPTVLKQWFERFSSK 904
            LENR+ PR R H WL+E G   + YS+ASI+ATSE  FI RL GIHP + K WFERF+++
Sbjct: 492  LENRISPRFRFHKWLVEKGLSEKSYSIASIVATSEKAFIARLYGIHPAIPKHWFERFANR 551


>emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]
          Length = 545

 Score =  327 bits (837), Expect = 5e-87
 Identities = 158/298 (53%), Positives = 213/298 (71%)
 Frame = +2

Query: 5    IGKRWDVFLECSEEVLVTKVEYFKRMNIKEEDVGLFLLRCPEVLQFDLESPVFSAMRFLK 184
            +G+  ++FLE SEEVLV K+++F R+N+++  +GL LL CPE+L FDLE+P         
Sbjct: 259  MGRSRNIFLEYSEEVLVRKMDFFCRLNVRKAGIGLLLLECPEILSFDLEAP--------- 309

Query: 185  HFGLSDEELDAIALEYPYVLGKNRLANLPHFMRAIDRHEWFFDKIMNGNHHLLADLGIDS 364
                   +  ++A  YPYVLG+N++ANLPH MRA+D HEWFF  + NGNH LL +  +  
Sbjct: 310  -------KSKSVARMYPYVLGRNKMANLPHVMRALDLHEWFFGMMKNGNHRLLGNYVLSH 362

Query: 365  QDEDFEKDFKDCLERFRSGRSYKHALAKLDFLHEIGFGENLVTLKVLSNLHGTKSELQVR 544
             DED ++D++  LE+ +S R+  H + KL+FLH IG+GENL+T+KVL ++HGT SELQ R
Sbjct: 363  PDEDLDEDYRVGLEKIQSSRTPAHTINKLNFLHGIGYGENLLTMKVLEHVHGTSSELQER 422

Query: 545  FNYLLGRGVAFSRLSKMIKMLPKVLNQKPELLKDKVDFLCNEVGMSVQFLDVFPGFLCFD 724
            FN LL  G+ FS+L  MI    K+LNQKPE+L+ KV+FL  E+G+S+Q+LDVFP +LCF+
Sbjct: 423  FNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFLIQEMGLSLQYLDVFPAYLCFN 482

Query: 725  LENRMKPRLRIHMWLLENGFHVREYSLASIIATSENRFIDRLVGIHPTVLKQWFERFS 898
            L+NR+KPR R H+WL ENG   + YSLAS+IATSE  FI RL GIHP V K W E FS
Sbjct: 483  LDNRIKPRYRXHVWLAENGLCTKNYSLASMIATSEKSFIARLYGIHPAVPKLWLECFS 540