BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017766
         (1480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ...    79   3e-12
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        77   9e-12
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-11
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    75   3e-11
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    72   3e-10

>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana] gi|93007380|gb|ABE97193.1| hypothetical protein
            At5g13655 [Arabidopsis thaliana]
          Length = 385

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
 Frame = +3

Query: 1263 ICRPKEEGGLGVRCVEDWNRVGQLKLFWRFVNSKDSLWADWVTSEYLKRGTIWDV-DISA 1439
            +C PK EGGLG+R VE+ N+V  LKL WR +++K SLW DWV    L+ G++W V + S+
Sbjct: 24   VCTPKSEGGLGLRAVEETNKVCMLKLIWRILSAKGSLWVDWVKKHLLRGGSLWAVKETSS 83

Query: 1440 DCSWAWCSILYQR 1478
              SW W  +L  R
Sbjct: 84   RGSWIWKKLLKYR 96


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = +3

Query: 1257 AKICRPKEEGGLGVRCVEDWNRVGQLKLFWRFVNSKDSLWADWVTSEYLKRGTIWDVDIS 1436
            A +C PK EGGLG+R + +WN+   ++L WR   +KDSLWADW    +L RG+ W V+  
Sbjct: 856  AALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGG 915

Query: 1437 ADCSWAWCSILYQR 1478
               SW W  +L  R
Sbjct: 916  QSDSWTWKRLLSLR 929


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +3

Query: 1260 KICRPKEEGGLGVRCVEDWNRVGQLKLFWRFVNSKD-SLWADWVTSEYLKRGTIWDVDIS 1436
            ++C PK+EGGLG++ +++WN++  LK  W   N  D S+W+ W+ S  L+    W +   
Sbjct: 151  QVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTP 210

Query: 1437 ADCSWAWCSILYQR 1478
             +CSWAW  IL  R
Sbjct: 211  QNCSWAWGKILKLR 224


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|7267919|emb|CAB78261.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 662

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 32/72 (44%), Positives = 44/72 (61%)
 Frame = +3

Query: 1263 ICRPKEEGGLGVRCVEDWNRVGQLKLFWRFVNSKDSLWADWVTSEYLKRGTIWDVDISAD 1442
            +CRPK EGGLG++ +++ N V  LKL WR V+  DSLW  W+ +  LKR T W    ++ 
Sbjct: 383  VCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQ 442

Query: 1443 CSWAWCSILYQR 1478
             SW W  +L  R
Sbjct: 443  GSWMWKKLLKYR 454


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = +3

Query: 1257 AKICRPKEEGGLGVRCVEDWNRVGQLKLFWRFVNSKDSLWADWVTSEYLKRGTIWDVDIS 1436
            +++C+ KEEGGLG++ +++ N V  LKL WR ++++DSLW  WV    +++ T W V  +
Sbjct: 1010 SEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKEN 1069

Query: 1437 ADC-SWAWCSILYQR 1478
                SW W  IL QR
Sbjct: 1070 TGLGSWLWRKILKQR 1084