BLASTX nr result

ID: Coptis23_contig00017763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017763
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556297.1| PREDICTED: coatomer subunit alpha-1-like [Gl...   175   4e-42
ref|XP_003536291.1| PREDICTED: coatomer subunit alpha-1-like [Gl...   175   4e-42
ref|XP_002878550.1| hypothetical protein ARALYDRAFT_900556 [Arab...   174   9e-42
ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41

>ref|XP_003556297.1| PREDICTED: coatomer subunit alpha-1-like [Glycine max]
          Length = 1218

 Score =  175 bits (443), Expect = 4e-42
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -2

Query: 260 GDDYSIKVWNYKLHRCLFTLLGHLEYIRTVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 81
           GDDY IKVWNYKLHRCLFTLLGHL+YIRTVQFHHE+PWI SA DDQTIRIWNWQSRTCI+
Sbjct: 70  GDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCIS 129

Query: 80  VLTGHIHYVMCAVFHPKEDLVVSASL 3
           VLTGH HYVMCA+FHPKEDLVVSASL
Sbjct: 130 VLTGHNHYVMCALFHPKEDLVVSASL 155


>ref|XP_003536291.1| PREDICTED: coatomer subunit alpha-1-like [Glycine max]
          Length = 1218

 Score =  175 bits (443), Expect = 4e-42
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -2

Query: 260 GDDYSIKVWNYKLHRCLFTLLGHLEYIRTVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 81
           GDDY IKVWNYKLHRCLFTLLGHL+YIRTVQFHHE+PWI SA DDQTIRIWNWQSRTCI+
Sbjct: 70  GDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCIS 129

Query: 80  VLTGHIHYVMCAVFHPKEDLVVSASL 3
           VLTGH HYVMCA+FHPKEDLVVSASL
Sbjct: 130 VLTGHNHYVMCALFHPKEDLVVSASL 155


>ref|XP_002878550.1| hypothetical protein ARALYDRAFT_900556 [Arabidopsis lyrata subsp.
           lyrata] gi|297324389|gb|EFH54809.1| hypothetical protein
           ARALYDRAFT_900556 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score =  174 bits (440), Expect = 9e-42
 Identities = 78/86 (90%), Positives = 81/86 (94%)
 Frame = -2

Query: 260 GDDYSIKVWNYKLHRCLFTLLGHLEYIRTVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 81
           GDDY IKVWNYKLHRCLFTLLGHL+YIRTVQFHHE+PWI SA DDQTIRIWNWQSRTCI+
Sbjct: 70  GDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCIS 129

Query: 80  VLTGHIHYVMCAVFHPKEDLVVSASL 3
           VLTGH HYVMCA FHPKEDLVVSASL
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASL 155


>ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1|
           predicted protein [Populus trichocarpa]
          Length = 1218

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/86 (90%), Positives = 80/86 (93%)
 Frame = -2

Query: 260 GDDYSIKVWNYKLHRCLFTLLGHLEYIRTVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 81
           GDDY IKVWNYKLHRCLFTLLGHL+YIRTVQFHHE PWI SA DDQTIRIWNWQSRTCI+
Sbjct: 70  GDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129

Query: 80  VLTGHIHYVMCAVFHPKEDLVVSASL 3
           VLTGH HYVMCA FHPKEDLVVSASL
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASL 155


>ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|222858686|gb|EEE96233.1|
           predicted protein [Populus trichocarpa]
          Length = 1220

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/86 (90%), Positives = 80/86 (93%)
 Frame = -2

Query: 260 GDDYSIKVWNYKLHRCLFTLLGHLEYIRTVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 81
           GDDY IKVWNYKLHRCLFTLLGHL+YIRTVQFHHE PWI SA DDQTIRIWNWQSRTCI+
Sbjct: 70  GDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129

Query: 80  VLTGHIHYVMCAVFHPKEDLVVSASL 3
           VLTGH HYVMCA FHPKEDLVVSASL
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASL 155


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