BLASTX nr result

ID: Coptis23_contig00017751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017751
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281589.2| PREDICTED: protein KIAA0415-like [Vitis vini...   406   e-111
ref|XP_002317582.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106
ref|XP_004142556.1| PREDICTED: AP-5 complex subunit zeta-1-like ...   377   e-102
ref|XP_003527326.1| PREDICTED: protein KIAA0415-like [Glycine max]    368   e-100
gb|AFK36545.1| unknown [Lotus japonicus]                              361   1e-97

>ref|XP_002281589.2| PREDICTED: protein KIAA0415-like [Vitis vinifera]
           gi|297735974|emb|CBI23948.3| unnamed protein product
           [Vitis vinifera]
          Length = 569

 Score =  406 bits (1043), Expect = e-111
 Identities = 207/281 (73%), Positives = 229/281 (81%)
 Frame = +1

Query: 49  GEVVLHDADPSLRTFFRSCLSREFADPIVAEATLDFLKVNITKIIISXXXXXXXXXXXXX 228
           GE+VLHDADPSLRTFFRSCLSREFADP+VA+ATLDFL  N  KI+ S             
Sbjct: 94  GEIVLHDADPSLRTFFRSCLSREFADPVVAKATLDFLIWNKKKILTSFPTLLPQFFPLLL 153

Query: 229 XXIVWNGEKLEKSFLKIFPGMMSPGSFLPLFPSIVDLPILVVALEKVERXXXXXXXXXXX 408
             I WNGEKLEKSFLK+FPG++SPGSFLPLFPS++DLPILVVALEKVER           
Sbjct: 154 KLIAWNGEKLEKSFLKVFPGLISPGSFLPLFPSVLDLPILVVALEKVERSSGPLIGSSIA 213

Query: 409 XXQKSTAPEMLLALMDEAYTGSTIEDREGDSDPEDSSTIDVADSLFLDLLKDENDGLVER 588
             QKSTAPEMLLALMDEAYTGSTI D  GDS+ EDS+ IDVAD LF DLLKDENDGL ER
Sbjct: 214 SIQKSTAPEMLLALMDEAYTGSTIGDGGGDSESEDSNAIDVADPLFFDLLKDENDGLAER 273

Query: 589 QWTSPGMSAALQAAVSTPQTDRLSQTLRMTPRFLDMYFAIAFRDVNKSLICALIPLLMSR 768
            WTSPG++AALQAA++TPQ+DRL Q+L M PR LDMYFAIA RDVN SLICAL+PL+M+R
Sbjct: 274 HWTSPGIAAALQAAINTPQSDRLKQSLNMAPRVLDMYFAIALRDVNNSLICALLPLIMTR 333

Query: 769 NATIFTDKIFAYEVRRRLLEFMLATFQRFPDFIALLKKPIM 891
           NATIF DKIF+YEVR+RLLEFMLA FQR PDFIALLKKPIM
Sbjct: 334 NATIFPDKIFSYEVRKRLLEFMLAAFQRSPDFIALLKKPIM 374


>ref|XP_002317582.1| predicted protein [Populus trichocarpa] gi|222860647|gb|EEE98194.1|
           predicted protein [Populus trichocarpa]
          Length = 572

 Score =  389 bits (999), Expect = e-106
 Identities = 206/298 (69%), Positives = 224/298 (75%), Gaps = 1/298 (0%)
 Frame = +1

Query: 1   SYGXXXXXXXXXXXXXGEVVLHDADPSLRTFFRSCLSREFADPIVAEATLDFLKVNITKI 180
           SYG             GEVVLHDADP LRTF R+CLSREFADP+VAEATLDFL VN  KI
Sbjct: 82  SYGLLLLAILQFFLDFGEVVLHDADPILRTFLRTCLSREFADPVVAEATLDFLNVNKKKI 141

Query: 181 IISXXXXXXXXXXXXXXXIVWNGEKLEKSFLKIFPG-MMSPGSFLPLFPSIVDLPILVVA 357
           + S               I WNGEKLEKSF+KIFPG MMSPGSFLPLFPS+VDLPILVVA
Sbjct: 142 LTSFPTLLPQFFPLMLKLIAWNGEKLEKSFMKIFPGLMMSPGSFLPLFPSLVDLPILVVA 201

Query: 358 LEKVERXXXXXXXXXXXXXQKSTAPEMLLALMDEAYTGSTIEDREGDSDPEDSSTIDVAD 537
           L+KVER             QKSTAPEMLLALMDEAYTGSTI D   DS+ EDSS ID AD
Sbjct: 202 LQKVERSSGSLIGSSIASIQKSTAPEMLLALMDEAYTGSTIADGGVDSESEDSSAIDAAD 261

Query: 538 SLFLDLLKDENDGLVERQWTSPGMSAALQAAVSTPQTDRLSQTLRMTPRFLDMYFAIAFR 717
             FL+ LKDENDGL ER WTSP M A LQA ++TPQ+DRL Q L+MTPR LD+YFAI+ R
Sbjct: 262 PFFLEFLKDENDGLPERHWTSPAMVATLQATINTPQSDRLKQMLKMTPRLLDVYFAISLR 321

Query: 718 DVNKSLICALIPLLMSRNATIFTDKIFAYEVRRRLLEFMLATFQRFPDFIALLKKPIM 891
           DVN SLICALIPLLMSRN T+F DKIF+YEVR+RLLEFMLA FQR P+FIALLKKPIM
Sbjct: 322 DVNDSLICALIPLLMSRNDTMFPDKIFSYEVRKRLLEFMLAAFQRSPNFIALLKKPIM 379


>ref|XP_004142556.1| PREDICTED: AP-5 complex subunit zeta-1-like [Cucumis sativus]
           gi|449485380|ref|XP_004157150.1| PREDICTED: AP-5 complex
           subunit zeta-1-like [Cucumis sativus]
          Length = 568

 Score =  377 bits (967), Expect = e-102
 Identities = 193/281 (68%), Positives = 219/281 (77%)
 Frame = +1

Query: 49  GEVVLHDADPSLRTFFRSCLSREFADPIVAEATLDFLKVNITKIIISXXXXXXXXXXXXX 228
           GEVVLHDADPSL+TFFRSCLSREFADPIVAEA L+FL  N+ K + S             
Sbjct: 94  GEVVLHDADPSLKTFFRSCLSREFADPIVAEAVLEFLNANLNKFLTSFPTLLPQFFPLLL 153

Query: 229 XXIVWNGEKLEKSFLKIFPGMMSPGSFLPLFPSIVDLPILVVALEKVERXXXXXXXXXXX 408
             I WNGEKLEK FLKIFP ++SPGSFLPLFPS++D PILVVALEKVER           
Sbjct: 154 KLIAWNGEKLEKPFLKIFPALISPGSFLPLFPSLMDFPILVVALEKVERCSGSLVGNSIA 213

Query: 409 XXQKSTAPEMLLALMDEAYTGSTIEDREGDSDPEDSSTIDVADSLFLDLLKDENDGLVER 588
             QKS APEMLLALMDEAYTGSTI D  GDS+ EDS+T+DVAD LFL+LLKDENDGL ER
Sbjct: 214 SIQKSKAPEMLLALMDEAYTGSTIGDGGGDSESEDSNTLDVADPLFLELLKDENDGLSER 273

Query: 589 QWTSPGMSAALQAAVSTPQTDRLSQTLRMTPRFLDMYFAIAFRDVNKSLICALIPLLMSR 768
            W SPGM+A +QAA++T Q+DRL Q L MTPR LD+YF++A R VN SLICALIPLLMSR
Sbjct: 274 HWNSPGMTAVIQAALNTAQSDRLEQLLNMTPRILDVYFSVALRVVNNSLICALIPLLMSR 333

Query: 769 NATIFTDKIFAYEVRRRLLEFMLATFQRFPDFIALLKKPIM 891
           N+ +F +K F+Y+VR+RLLEFMLA FQR P FIALLKKPIM
Sbjct: 334 NSILFPNKDFSYKVRKRLLEFMLAAFQRSPAFIALLKKPIM 374


>ref|XP_003527326.1| PREDICTED: protein KIAA0415-like [Glycine max]
          Length = 565

 Score =  368 bits (945), Expect = e-100
 Identities = 189/281 (67%), Positives = 218/281 (77%)
 Frame = +1

Query: 49  GEVVLHDADPSLRTFFRSCLSREFADPIVAEATLDFLKVNITKIIISXXXXXXXXXXXXX 228
           GEVVLHDADPSLRTFFR CLSREFADP+VAEATL+FL +N  K++ S             
Sbjct: 94  GEVVLHDADPSLRTFFRLCLSREFADPVVAEATLEFLIINKKKLLTSFPNLLPQFFPLLL 153

Query: 229 XXIVWNGEKLEKSFLKIFPGMMSPGSFLPLFPSIVDLPILVVALEKVERXXXXXXXXXXX 408
             + WNGE+LEK FLK FPG+MSPGSF+ LFPS+VDLPILVVALEKVE+           
Sbjct: 154 KLVAWNGERLEKLFLKAFPGLMSPGSFISLFPSLVDLPILVVALEKVEKSSGPLIGSSIA 213

Query: 409 XXQKSTAPEMLLALMDEAYTGSTIEDREGDSDPEDSSTIDVADSLFLDLLKDENDGLVER 588
             QK+TAP+MLLALMDEAYTGSTIED  GDS+ ED+S IDVAD  FL+LLKDENDG+ ER
Sbjct: 214 SIQKNTAPKMLLALMDEAYTGSTIEDGGGDSESEDNSAIDVADPFFLELLKDENDGIAER 273

Query: 589 QWTSPGMSAALQAAVSTPQTDRLSQTLRMTPRFLDMYFAIAFRDVNKSLICALIPLLMSR 768
            W+SP M+A LQA+V++P +DRL   L M P  LD+YF+IA   VN SLICALIPLLMSR
Sbjct: 274 PWSSPVMAAILQASVNSPYSDRLKAVLNMAPHLLDVYFSIALHTVNNSLICALIPLLMSR 333

Query: 769 NATIFTDKIFAYEVRRRLLEFMLATFQRFPDFIALLKKPIM 891
            ATIF DKIF+YEVR+RLLEFML+TFQ  P+FIALLKKPIM
Sbjct: 334 FATIFPDKIFSYEVRKRLLEFMLSTFQCSPNFIALLKKPIM 374


>gb|AFK36545.1| unknown [Lotus japonicus]
          Length = 574

 Score =  361 bits (927), Expect = 1e-97
 Identities = 183/281 (65%), Positives = 216/281 (76%)
 Frame = +1

Query: 49  GEVVLHDADPSLRTFFRSCLSREFADPIVAEATLDFLKVNITKIIISXXXXXXXXXXXXX 228
           G+VVLHDADPSLRTFFRSCLSREFADP+VAEA L+FL  N  K++ S             
Sbjct: 95  GDVVLHDADPSLRTFFRSCLSREFADPVVAEAMLEFLITNKKKLLTSFPNLLPQFFPLLL 154

Query: 229 XXIVWNGEKLEKSFLKIFPGMMSPGSFLPLFPSIVDLPILVVALEKVERXXXXXXXXXXX 408
             I WNGE+LEK F+K FPG++SPGSF+PLFP ++DLPIL VALEKVE+           
Sbjct: 155 KMIAWNGERLEKLFMKAFPGLISPGSFIPLFPYLLDLPILAVALEKVEKSSGPLIGSSIA 214

Query: 409 XXQKSTAPEMLLALMDEAYTGSTIEDREGDSDPEDSSTIDVADSLFLDLLKDENDGLVER 588
             QK+TAP+MLLALMDEAYTGSTIED  GDS+  DSS IDV+D +FL+LLKDENDG+ ER
Sbjct: 215 SIQKNTAPKMLLALMDEAYTGSTIEDGGGDSESGDSSAIDVSDPIFLELLKDENDGIAER 274

Query: 589 QWTSPGMSAALQAAVSTPQTDRLSQTLRMTPRFLDMYFAIAFRDVNKSLICALIPLLMSR 768
            W+SP M+  LQAAV++P +DRL   L M P  LD+YF+IA  DVN SLICALIPLLMSR
Sbjct: 275 PWSSPMMTTILQAAVNSPYSDRLKSVLSMAPHLLDVYFSIALHDVNDSLICALIPLLMSR 334

Query: 769 NATIFTDKIFAYEVRRRLLEFMLATFQRFPDFIALLKKPIM 891
            +TIF DKIF+YEVR+RLLEFML++FQR P FIA+LKKPIM
Sbjct: 335 YSTIFPDKIFSYEVRKRLLEFMLSSFQRSPKFIAILKKPIM 375


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