BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017750
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...   149   1e-33
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   147   5e-33
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...   145   3e-32
ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|35550...   142   2e-31
ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|35548...   140   8e-31

>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score =  149 bits (377), Expect = 1e-33
 Identities = 117/372 (31%), Positives = 179/372 (48%), Gaps = 9/372 (2%)
 Frame = -2

Query: 1186 LPGELLLEILSWLPIKSLLRFRCVSKSSLRLLTTDPHFAKLHLDHSLVTNTNPG-ILAVE 1010
            LP E+L EILS LP++SLLRFR  SKS   L+ +  H   LHL  SL   +N   IL V+
Sbjct: 5    LPREVLTEILSRLPVRSLLRFRSTSKSWKSLIDSQ-HLNWLHLTRSLTLTSNTSLILRVD 63

Query: 1009 TNNTGAMNKFHFALDFTACDNSVHFGVPFCPDTKSYGVKRICNGMILLSVYTVKDNVYLW 830
            ++         +  +F   D  V    P    + S  +   CNG++ +S   V D++  W
Sbjct: 64   SDL--------YQTNFPTLDPPVSLNHPLMCYSNSITLLGSCNGLLCIS--NVADDIAFW 113

Query: 829  NPLTRDYIAIPVPPTPKSL---PSRLRKSTFGFGFHQATDQYKLIRFASELDFVNYVFLT 659
            NP  R +  +P  P P+      +       GFGF   T  YKL+R +  +D  +  F +
Sbjct: 114  NPSLRQHRILPYLPVPRRRHPDTTLFAARVCGFGFDHKTRDYKLVRISYFVDLHDRSFDS 173

Query: 658  SVSVYTLGRDSSWRTLEQDNHHYDACLHRSTPPHVNGALHWL-SRKTGLPPSSAIVSFNL 482
             V +YTL R ++W+TL   +  Y  C  R+    V  +LHW+ +RK        I++F+L
Sbjct: 174  QVKLYTL-RANAWKTLP--SLPYALCCARTMGVFVGNSLHWVVTRKLEPDQPDLIIAFDL 230

Query: 481  EQEILQEMPVPKD--VSSSEWIDLLIVGELGGLLCLFCNQLQVDVQIWVMKQYGVVGSWS 308
              +I +E+P+P    V     IDL +   LGG LC+  N  +  + +WVM++Y    SW 
Sbjct: 231  THDIFRELPLPDTGGVDGGFEIDLAL---LGGSLCMTVNFHKTRIDVWVMREYNRRDSWC 287

Query: 307  KQFTIGRPEVCGLFVLLHPLGVSND-HEIILMKRFSELILYNQVTNSIRDLKTFG-SRFI 134
            K FT+           + PLG S+D ++++L      L  Y+     +  +K  G     
Sbjct: 288  KVFTLEESREMRSLKCVRPLGYSSDGNKVLLEHDRKRLFWYDLEKKEVALVKIQGLPNLN 347

Query: 133  DAYTYTGSLVSP 98
            +A    G+LV P
Sbjct: 348  EAMICLGTLVPP 359


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
            gi|355511583|gb|AES92725.1| F-box family protein
            [Medicago truncatula]
          Length = 392

 Score =  147 bits (372), Expect = 5e-33
 Identities = 115/377 (30%), Positives = 181/377 (48%), Gaps = 11/377 (2%)
 Frame = -2

Query: 1186 LPGELLLEILSWLPIKSLLRFRCVSKSSLRLL-TTDPHFAKLHLDHSLVTNTNPGILAVE 1010
            LP E+  EILS +P K LLR R   K    L+ +TD  F  LHL  S        ++ + 
Sbjct: 4    LPTEVTTEILSRVPAKPLLRLRSTCKWWRNLIDSTD--FIFLHLSKS-----RDSVIILR 56

Query: 1009 TNNTGAMNKFHFALDFTACDNSVHFGVPFCPDTKSYGVKRICNGMILLSVYTVKDNVYLW 830
             ++        + LD  + D       P    +    V   CNG  LL +  + D++  W
Sbjct: 57   QHSR------LYELDLNSMDRVKELDHPLMCYSNRIKVLGSCNG--LLCICNIADDIAFW 108

Query: 829  NPLTRDYIAIPVPPTPK-------SLPSRLRKSTFGFGFHQATDQYKLIRFASELDFVNY 671
            NP  R +  IP  P  +       ++ + L    +GFG+  ATD YKL+  +  +D  N 
Sbjct: 109  NPTIRKHRIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNR 168

Query: 670  VFLTSVSVYTLGRDSSWRTLEQDNHHYDACLHRSTPPHVNGALHWLSRKTGLPPS-SAIV 494
             F + V +YT+ R   W+TL   +  Y  C  R+    V+GALHW+  +   P S   IV
Sbjct: 169  SFDSHVKIYTM-RTDVWKTLP--SMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIV 225

Query: 493  SFNLEQEILQEMPVPKDVSSSEWIDLLIVGELGGLLCLFCNQLQVDVQIWVMKQYGVVGS 314
            +F+L  E+ +E+ +P  V     +D+ +   L G+LC+  N+      +WVM++YG   S
Sbjct: 226  AFDLRFEVFREVALPGTVDGKFDMDVAL---LRGMLCIIENRGSDGFDVWVMREYGSHDS 282

Query: 313  WSKQFTIGRPEVCGLFVLLHPLGVSNDHEIILMKRFS-ELILYNQVTNSIRDLKTFG-SR 140
            W K FT+G+P    L   L PLG S + + +L ++ S +L  YN  +  +  ++  G   
Sbjct: 283  WCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVLFEQDSKKLCWYNLASKDVSWVRISGIPN 342

Query: 139  FIDAYTYTGSLVSPTVI 89
             I+     GSLV P+++
Sbjct: 343  SIEGTVCVGSLVKPSLM 359


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score =  145 bits (366), Expect = 3e-32
 Identities = 105/335 (31%), Positives = 164/335 (48%), Gaps = 10/335 (2%)
 Frame = -2

Query: 1186 LPGELLLEILSWLPIKSLLRFRCVSKSSLRLLTTDPHFAKLHLDHSLVTNTNPGILAVET 1007
            LP E++ +ILS LP KSLLRFR  SKS   L+ +  HF  +HL  SL   +N  ++    
Sbjct: 5    LPREVVTDILSRLPAKSLLRFRSTSKSWKSLIDSQ-HFNSVHLSRSLSLTSNTTLIL--- 60

Query: 1006 NNTGAMNKFHFALDFTACDNSVHFGVPFCPDTKSYGVKRICNGMILLSVYTVKDNVYLWN 827
                 ++   +  +F   D  +    P    + +  +   CNG++ +S   V D++  WN
Sbjct: 61   ----RLDSDLYQTNFPTLDPPLFLNHPLMCYSNNITLLGSCNGLLCIS--NVADDIAFWN 114

Query: 826  PLTRDYIAIPVPPTPKSLPSRLRKST-------FGFGFHQATDQYKLIRFASELDFVNYV 668
            P  R +  +P  P P+    RL   T       +GFGF   +  YKL+R +  +D  +  
Sbjct: 115  PSLRQHRILPSLPLPRR---RLHPDTTLFAARVYGFGFDHTSPDYKLVRISYFVDLQDRS 171

Query: 667  FLTSVSVYTLGRDSSWRTLEQDNHHYDACLHRSTPPHVNGALHWL-SRKTGLPPSSAIVS 491
            F + V +YTL R ++W+TL   +  Y  C  R+    V  +LHW+ +RK        IV+
Sbjct: 172  FDSQVKLYTL-RANAWKTLP--SMPYALCCARTMGVFVGNSLHWVVTRKLEPDQPDLIVA 228

Query: 490  FNLEQEILQEMPVPKD--VSSSEWIDLLIVGELGGLLCLFCNQLQVDVQIWVMKQYGVVG 317
            F+L  EI  E+P+P    V     ID+ ++G+    LC+  N     + +WVM++Y    
Sbjct: 229  FDLTHEIFTELPLPDTGGVGGGFEIDVALLGDS---LCMTVNFHNSKMDVWVMREYNRGD 285

Query: 316  SWSKQFTIGRPEVCGLFVLLHPLGVSNDHEIILMK 212
            SW K FT+        F  L PLG S+D   +L++
Sbjct: 286  SWCKLFTLEESRELRSFKCLRPLGYSSDGNKVLLE 320


>ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|355503433|gb|AES84636.1| F-box
            protein [Medicago truncatula]
          Length = 383

 Score =  142 bits (358), Expect = 2e-31
 Identities = 117/380 (30%), Positives = 172/380 (45%), Gaps = 16/380 (4%)
 Frame = -2

Query: 1186 LPGELLLEILSWLPIKSLLRFRCVSKSSLRLLTTDPHFAKLHLDH----SLVTNTNPGIL 1019
            LP E+L  ILS LP +SLLRFR  SKS L+ L    +F KLHL +    SL+   N    
Sbjct: 4    LPPEILTGILSLLPAQSLLRFRSTSKS-LQSLIDSHNFIKLHLQNFLNRSLILRHNFDFY 62

Query: 1018 AVETNNTGAMNKFHFALDFTACDNSVHFGVPFCPDTKSYGVKRICNGMILLSVYTVKDNV 839
             +E              DF+     V   +PF        +   CNG++ +S       +
Sbjct: 63   QIE--------------DFSNLTTGVKLNIPFTGPINRMSLLGSCNGLLCISSNA---GI 105

Query: 838  YLWNPLTRDYIAIPVPPTPKSLPSRLRKSTF------GFGFHQATDQYKLIRFASELDFV 677
              WNP  R +  IP PP P         + +      GFGF   T+ YKLIR +  +   
Sbjct: 106  AFWNPNIRKHRIIPFPPIPTPQHHESNNNIYVGFCIHGFGFDPLTNDYKLIRISCFVGVQ 165

Query: 676  NYVFLTSVSVYTLGRDSSWRTLEQDNHHYDACLHRSTPPHVNGALHW-LSRKTGLPPSSA 500
            +  F + V +++  + +SW+ L    +       R+    V  +LHW ++RK  L    A
Sbjct: 166  HSTFESHVRLFSF-KTNSWKELPTMPYTLSYA-RRTMGDFVENSLHWVMTRKLDLLQPRA 223

Query: 499  IVSFNLEQEILQEMPVPK---DVSSSEWIDLLIVGELGGLLCLFCNQLQVDVQIWVMKQY 329
            IV+FNL  EI  E+P P+   DV+S  +   + +  L G LC+  N     + +WVMK+Y
Sbjct: 224  IVAFNLTLEIFNEVPFPEIGEDVNSESF--QIGISVLEGCLCMIVNYQTAKIDVWVMKEY 281

Query: 328  GVVGSWSKQFTIGRPEVCGLFVL--LHPLGVSNDHEIILMKRFSELILYNQVTNSIRDLK 155
            G   SW K FT+   E C    L  L  LG S+D  ++L++   E + +  + +      
Sbjct: 282  GCRDSWCKLFTLA--ESCFSLPLRALRILGYSSDRSMVLLQVDREKLFWYDLKSECVSYV 339

Query: 154  TFGSRFIDAYTYTGSLVSPT 95
                R   A    GSLV P+
Sbjct: 340  EGIPRVDHAIICVGSLVQPS 359


>ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|355483439|gb|AES64642.1| F-box
            protein [Medicago truncatula]
          Length = 388

 Score =  140 bits (353), Expect = 8e-31
 Identities = 120/380 (31%), Positives = 176/380 (46%), Gaps = 15/380 (3%)
 Frame = -2

Query: 1186 LPGELLLEILSWLPIKSLLRFRCVSKSSLRLLTTDPHFAKLHLDHSLVTNTNPGILAVET 1007
            LP E+L EI S LP+KSLLRFR  SKS L+ L     F  LHL +SL  N    IL  +T
Sbjct: 4    LPPEILSEIFSRLPVKSLLRFRSTSKS-LKSLIDSHKFINLHLQNSLNFNL---ILRRKT 59

Query: 1006 NNTGAMNKFHFALDFTACDNSVHFGVPFCPDTKSYGVKRICNGMILLSVYTVK------- 848
            +         + L F     +V    PF   + +  +   CNG++ +S   +        
Sbjct: 60   DL--------YHLHFPNLTTAVPLNHPFIHHSNNIALLGSCNGLLAISNGEIAFTNPYSA 111

Query: 847  DNVYLWNPLTRDYIAIPVPPTPKSLPSRLRKSTF-----GFGFHQATDQYKLIRFASELD 683
            + +   NP  R +  IP  P P  +PSR +         GFGF   +  YKL+R +  +D
Sbjct: 112  NEIAFCNPTIRKHRIIPYLPLP--IPSRSQSDNIALCVHGFGFDSLSADYKLLRISWFVD 169

Query: 682  FVNYVFLTSVSVYTLGRDSSWRTLEQDNHHYDACLHRSTPPHVNGALHWLS--RKTGLPP 509
              ++ F  S       + +SW+TL   +  Y      +    V  +LHW+   +  GL P
Sbjct: 170  LQHHTFDNSHLTLFSSKTNSWKTLP--DMPYILYYTLTMGVFVENSLHWIMTPKLDGLQP 227

Query: 508  SSAIVSFNLEQEILQEMPVPKDVSSSEWIDLLIVGELGGLLCLFCNQLQVDVQIWVMKQY 329
               I +FNL  EI  E+P+P ++ S+E   + I   LGG LCL  N     + +WVMK+Y
Sbjct: 228  C-LIAAFNLSLEIFNEVPLPDEIISNESFKISIA-VLGGCLCLPVNYQTTKIDVWVMKEY 285

Query: 328  GVVGSWSKQFTIGRPEVCGLFVLLHPLGVSNDHEIILMK-RFSELILYNQVTNSIRDLKT 152
            G   SW K FT+    V      L PLG  +D   +L++    +L  Y+  +  I  ++ 
Sbjct: 286  GCRDSWCKHFTL----VKSCLDFLRPLGYCSDGSKVLLEIDCKKLFWYDLKSEQISYVEG 341

Query: 151  FGSRFIDAYTYTGSLVSPTV 92
                  D     GSLVSP++
Sbjct: 342  I-PNLDDTMICVGSLVSPSL 360