BLASTX nr result

ID: Coptis23_contig00017743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017743
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633415.1| PREDICTED: uncharacterized protein At5g08430...    65   4e-09
emb|CBI29667.3| unnamed protein product [Vitis vinifera]               65   4e-09
ref|XP_003537424.1| PREDICTED: uncharacterized protein At5g08430...    63   3e-08
ref|XP_003600613.1| Zinc finger CCCH domain-containing protein [...    59   3e-07
ref|XP_003600617.1| Zinc finger CCCH domain-containing protein [...    59   4e-07

>ref|XP_003633415.1| PREDICTED: uncharacterized protein At5g08430-like [Vitis vinifera]
          Length = 785

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 116 RGRSVAKKKEEIAEDYCFVCKDGGLLLVCDFKHCIKSY 3
           R R    KKEEIAEDYCFVCKDGGLL+VCD+K C+K+Y
Sbjct: 3   RRRRSKIKKEEIAEDYCFVCKDGGLLMVCDYKDCLKAY 40


>emb|CBI29667.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 116 RGRSVAKKKEEIAEDYCFVCKDGGLLLVCDFKHCIKSY 3
           R R    KKEEIAEDYCFVCKDGGLL+VCD+K C+K+Y
Sbjct: 3   RRRRSKIKKEEIAEDYCFVCKDGGLLMVCDYKDCLKAY 40


>ref|XP_003537424.1| PREDICTED: uncharacterized protein At5g08430-like [Glycine max]
          Length = 520

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 23/36 (63%), Positives = 33/36 (91%)
 Frame = -2

Query: 110 RSVAKKKEEIAEDYCFVCKDGGLLLVCDFKHCIKSY 3
           + + +KKEEIAED+CFVCKDGGLL+VC+++ C+K+Y
Sbjct: 3   KKIKRKKEEIAEDWCFVCKDGGLLMVCEYRDCLKAY 38


>ref|XP_003600613.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355489661|gb|AES70864.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 814

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -2

Query: 98  KKKEEIAEDYCFVCKDGGLLLVCDFKHCIKSY 3
           +KKEEIAEDYCFVCKDGG + VCDF  C+K+Y
Sbjct: 8   RKKEEIAEDYCFVCKDGGEMRVCDFGDCLKTY 39


>ref|XP_003600617.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355489665|gb|AES70868.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 379

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -2

Query: 110 RSVAKKKEEIAEDYCFVCKDGGLLLVCDFKHCIKSY 3
           R+  ++KEEI+EDYCF CKDGG L VCDF++C+K+Y
Sbjct: 4   RNNKRRKEEISEDYCFFCKDGGELRVCDFRNCLKTY 39


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