BLASTX nr result

ID: Coptis23_contig00017742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017742
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]   119   2e-25
ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...   118   4e-25
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...    77   1e-12

>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score =  119 bits (299), Expect = 2e-25
 Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 16/187 (8%)
 Frame = -1

Query: 513 QDSEKVRKMKKMGSLEGRRKIELSPSNDTSLSFRIFNTSLL-DKTCPLVDKRRSTLLSLN 337
           Q SE+VRK KKMG++EGRRKIELS S+D+S  FRI ++    D+  P+++++RS + SLN
Sbjct: 269 QSSEEVRKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLN 328

Query: 336 EDSPSSDVSKCHHPTDCNDFSFRFPSTQASSMARTP-----RSMSSDGSFNVSKDLKDRK 172
            D  +S V K              P +Q  S+  +P     R  SSDG F +  +L +R+
Sbjct: 329 SDLNASSVRK--------------PCSQVFSLPSSPGHFLTRGGSSDGFFEIGLNLDNRE 374

Query: 171 DCTS----------GKFTCNQTIGPQDDGNGLLESDTFYSLHKSLSEKVGMQYSPRCAES 22
           + ++           KF C+  +GPQ+D N LLE +T  +L+KSLS KV + +SP  +ES
Sbjct: 375 NHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSES 434

Query: 21  DNSKDSP 1
           D S+ SP
Sbjct: 435 DYSRTSP 441


>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score =  118 bits (296), Expect = 4e-25
 Identities = 71/173 (41%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
 Frame = -1

Query: 513 QDSEKVRKMKKMGSLEGRRKIELSPSNDTSLSFRIFNTSLL-DKTCPLVDKRRSTLLSLN 337
           Q SE+VRK KKMG++EGRRKIELS S+D+S  FRI ++    D+  P+++++RS + SLN
Sbjct: 90  QSSEEVRKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLN 149

Query: 336 EDSPSSDVSK-CHHPTDCNDFSFRFPSTQASSMARTPRSMSSDGSFNVSKDLKDRKDCTS 160
            D  +S V K C            F +   SS   +   ++ D   N S +  +R     
Sbjct: 150 SDLNASSVRKPCSQVFSLPSSPGHFLTRGGSSDGFSEIGLNLDNRENHSAESAERDSIRD 209

Query: 159 GKFTCNQTIGPQDDGNGLLESDTFYSLHKSLSEKVGMQYSPRCAESDNSKDSP 1
            KF C+  +GPQ+D N LLE +T  +L+KSLS KV + +SP  +ESD S+ SP
Sbjct: 210 SKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESDYSRTSP 262


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
 Frame = -1

Query: 513 QDSEKVRKMKKMGSLEGRRKIELSPSNDTSLSFRIFNT-SLLDKTCPLVDKRRSTLLSLN 337
           Q S +VR+MK+MG  EGRRKIELS ++DTS SFRI ++   LD+      ++RS   S++
Sbjct: 89  QSSREVRRMKEMGCNEGRRKIELSRASDTSFSFRIVDSLHCLDEE---TLQKRSPASSVS 145

Query: 336 ED-SPSSDVSKCHHPTDCNDFSFRFPSTQASSMARTPRSMSSDGSFNVSKDLKDRKDCTS 160
            + +P S    C  P   +DF+   P+       R   S    GS ++           +
Sbjct: 146 SNLNPKSVRRPCIEPCSSDDFTEICPNLD----KRDKHSAGIVGSDSIG----------N 191

Query: 159 GKFTCNQTIGPQDDGNGLLESDTFYSLHKSLSEKVGMQYSPRCAES 22
             F C Q +GP +DGN LLE DT  +  KSLS KV +  SP  + S
Sbjct: 192 PNFKCEQVVGPLNDGNELLERDTALTFQKSLSAKVEIPCSPSSSGS 237


>ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|222841022|gb|EEE78569.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 62/171 (36%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
 Frame = -1

Query: 513 QDSEKVRKMKKMGSLEGRRKIELSPSNDTSLSFRIFNTSLLDKTCPLVDK---RRSTLLS 343
           Q S +VR+ K+MGS  GRR IELS ++DTS SFRI     +D  C L ++   +RS   S
Sbjct: 85  QSSREVRRTKEMGSNGGRRTIELSRASDTSFSFRI-----VDSLCSLDEESMPKRSLASS 139

Query: 342 LNEDSPSSDVSK-CHHPTDCNDFSFRFPSTQASSMARTPRSMSSDGSFNVSKDLKDRKDC 166
           +N +S S  V + C  P   +DF    P+       R   S+ +  S ++          
Sbjct: 140 VNSNSNSKFVRRPCVEPRSSDDFIEICPNLDK----RDKHSVGAVRSDSIGNP------- 188

Query: 165 TSGKFTCNQTIGPQDDGNGLLESDTFYSLHKSLSEKVGMQYSPRCAESDNS 13
               F C + +GP +DGN LLE DT  + H+ +  KV M  SP  +ESD S
Sbjct: 189 ---NFKCEKVVGPLNDGNELLERDTALTYHQPVCAKVEMPCSPCSSESDFS 236


>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549704|gb|EEF51192.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 736

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 60/177 (33%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
 Frame = -1

Query: 513 QDSEKVRKMKKMGSLEGRRKIELSPSNDTSLSFRIFNTSLLDKTCPLVDKRRSTLLSLNE 334
           Q+S +VRKMKKMG  E R+KIELS  +DT+ SF I +                +L S NE
Sbjct: 84  QNSREVRKMKKMGIDEERKKIELSQDSDTTFSFNIVD----------------SLCSSNE 127

Query: 333 DSPSSDVSKCHHPTDCNDFSFRFPSTQASSMARTPRSMSSDGSFNVSKDLKDRKDCTSG- 157
           ++     S     ++ N  S R P T++S          SD  F +  +L  R+   +G 
Sbjct: 128 ENSQKRSSALCLNSNLNPESTRKPCTESS---------LSDDFFEICPNLDKREKQLAGT 178

Query: 156 ---------KFTCNQTIGPQDDGNGLLESDTFYSLHKSLSEKVGMQYSPRCAESDNS 13
                         Q +GP +D N LL+ D   + H+S S KV M YSP  +ESD S
Sbjct: 179 VRRDSIENPTLRSEQVVGPTNDANDLLDKDIALTFHRSHSVKVEMPYSPSPSESDCS 235


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