BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017734
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   157   2e-36
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   154   1e-35
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   150   2e-34
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   148   1e-33
ref|NP_176974.1| C3HC4-type RING finger domain-containing protei...   147   2e-33

>ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 352

 Score =  157 bits (396), Expect = 2e-36
 Identities = 69/103 (66%), Positives = 86/103 (83%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1   TESDLSILRKYNYKVFTDGEKSTGGAGRMVPVHGE---LADTHVLLPEDAECCICLSSYE 171
           +E+DLS+L KY +++ +D +K +GGAG MVP+      LA+   LLPEDAECCICL SYE
Sbjct: 250 SEADLSMLPKYRFRILSDEDKPSGGAGSMVPIETSSAYLANERTLLPEDAECCICLCSYE 309

Query: 172 DAAELHALPCSHHFHSTCIVKWLKINASCPLCKYNILKGNDQI 300
           D AELHALPC+HHFHS+CIVKWLK+NA+CPLCKYNILKGN+Q+
Sbjct: 310 DGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 352


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  154 bits (390), Expect = 1e-35
 Identities = 69/103 (66%), Positives = 85/103 (82%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1    TESDLSILRKYNYKVFTDGEKSTGGAGRMVPVH---GELADTHVLLPEDAECCICLSSYE 171
            +E+DLSIL KY +++  + EK + GAG+MVP+    G LA+  +LLPEDAECCICL  YE
Sbjct: 861  SEADLSILPKYRFQLTVEEEKPSVGAGKMVPIETSSGYLANERILLPEDAECCICLCPYE 920

Query: 172  DAAELHALPCSHHFHSTCIVKWLKINASCPLCKYNILKGNDQI 300
            D AELH LPC+HHFHSTCIVKWLK+NA+CPLCKYNILKGN+Q+
Sbjct: 921  DGAELHTLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 963


>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 357

 Score =  150 bits (380), Expect = 2e-34
 Identities = 67/103 (65%), Positives = 84/103 (81%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1   TESDLSILRKYNYKVFTDGEKSTGGAGRMVPVHGE---LADTHVLLPEDAECCICLSSYE 171
           +E+DLS+L KY +++ +D +K +GGAG MVP+      L +   LL EDAECCICL SYE
Sbjct: 255 SEADLSMLPKYKFRILSDVDKPSGGAGSMVPIETSSAYLENERTLLLEDAECCICLCSYE 314

Query: 172 DAAELHALPCSHHFHSTCIVKWLKINASCPLCKYNILKGNDQI 300
           D AELHALPC+HHFHS+CIVKWLK+NA+CPLCKYNILKGN+Q+
Sbjct: 315 DGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 357


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  148 bits (373), Expect = 1e-33
 Identities = 69/103 (66%), Positives = 84/103 (81%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1    TESDLSILRKYNYKVFTDGEKSTGGAGRMVPVH---GELADTHVLLPEDAECCICLSSYE 171
            +E+DLS+L +Y ++   + EKS  GAG M+P     G LA+  +LLPEDAECCICLSSYE
Sbjct: 2198 SEADLSMLPRYRFEANNE-EKSGVGAGTMIPTETSSGYLANERILLPEDAECCICLSSYE 2256

Query: 172  DAAELHALPCSHHFHSTCIVKWLKINASCPLCKYNILKGNDQI 300
            D AELHALPC+HHFHSTCI KWLK+NA+CPLCKYNILKG++QI
Sbjct: 2257 DGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNILKGSEQI 2299


>ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
           thaliana] gi|12324089|gb|AAG52017.1|AC012563_27 putative
           RING zinc finger protein; 27623-28978 [Arabidopsis
           thaliana] gi|90093276|gb|ABD85151.1| At1g68070
           [Arabidopsis thaliana] gi|332196622|gb|AEE34743.1|
           C3HC4-type RING finger domain-containing protein
           [Arabidopsis thaliana]
          Length = 343

 Score =  147 bits (370), Expect = 2e-33
 Identities = 66/102 (64%), Positives = 81/102 (79%), Gaps = 3/102 (2%)
 Frame = +1

Query: 1   TESDLSILRKYNYKVFTDGEKSTGGAGRMVPVHG---ELADTHVLLPEDAECCICLSSYE 171
           +E+DLSIL KY +    + EK + G G+M+PV      L +  VLLPEDA+CCICLSSYE
Sbjct: 241 SEADLSILPKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADCCICLSSYE 300

Query: 172 DAAELHALPCSHHFHSTCIVKWLKINASCPLCKYNILKGNDQ 297
           D AEL +LPC+HHFHSTCIVKWLK+NA+CPLCK+NILKGN+Q
Sbjct: 301 DGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQ 342