BLASTX nr result

ID: Coptis23_contig00017732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017732
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit ...   145   3e-33
ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetyl...   145   4e-33
emb|CBI36745.3| unnamed protein product [Vitis vinifera]              145   4e-33
emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]   145   4e-33
ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit alg13, putative
           [Ricinus communis] gi|223548307|gb|EEF49798.1|
           UDP-N-acetylglucosamine transferase subunit alg13,
           putative [Ricinus communis]
          Length = 178

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/88 (80%), Positives = 81/88 (92%)
 Frame = +2

Query: 29  KTVFVTVGTTSFDTLVKVVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSAGEDGCLAMD 208
           + VFVTVGTT FD LV+ VDT+QVK++LFRKGYTHLLIQMGRGS+ PTK+ GEDG LA+D
Sbjct: 12  RMVFVTVGTTLFDALVRAVDTEQVKQQLFRKGYTHLLIQMGRGSYTPTKTEGEDGSLAVD 71

Query: 209 YFTFSSSIADNLKSASLVISHAGSGSIF 292
           YFTFSSSIAD+L+SASLVISHAGSGSIF
Sbjct: 72  YFTFSSSIADHLRSASLVISHAGSGSIF 99


>ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine transferase
           subunit ALG13 homolog [Vitis vinifera]
          Length = 178

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/89 (79%), Positives = 79/89 (88%)
 Frame = +2

Query: 26  MKTVFVTVGTTSFDTLVKVVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSAGEDGCLAM 205
           ++TVFVTVGTT FD LVK VDT + K ELF +GYTHLLIQMGRGS+IPTKS GEDG L +
Sbjct: 11  VRTVFVTVGTTCFDALVKAVDTHEFKRELFARGYTHLLIQMGRGSYIPTKSTGEDGSLVV 70

Query: 206 DYFTFSSSIADNLKSASLVISHAGSGSIF 292
           D+FTFSSSIADNL+SASLVISHAGSGSIF
Sbjct: 71  DFFTFSSSIADNLRSASLVISHAGSGSIF 99


>emb|CBI36745.3| unnamed protein product [Vitis vinifera]
          Length = 169

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/89 (79%), Positives = 79/89 (88%)
 Frame = +2

Query: 26  MKTVFVTVGTTSFDTLVKVVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSAGEDGCLAM 205
           ++TVFVTVGTT FD LVK VDT + K ELF +GYTHLLIQMGRGS+IPTKS GEDG L +
Sbjct: 11  VRTVFVTVGTTCFDALVKAVDTHEFKRELFARGYTHLLIQMGRGSYIPTKSTGEDGSLVV 70

Query: 206 DYFTFSSSIADNLKSASLVISHAGSGSIF 292
           D+FTFSSSIADNL+SASLVISHAGSGSIF
Sbjct: 71  DFFTFSSSIADNLRSASLVISHAGSGSIF 99


>emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]
          Length = 169

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/89 (79%), Positives = 79/89 (88%)
 Frame = +2

Query: 26  MKTVFVTVGTTSFDTLVKVVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSAGEDGCLAM 205
           ++TVFVTVGTT FD LVK VDT + K ELF +GYTHLLIQMGRGS+IPTKS GEDG L +
Sbjct: 2   VRTVFVTVGTTCFDALVKAVDTHEFKRELFARGYTHLLIQMGRGSYIPTKSTGEDGSLVV 61

Query: 206 DYFTFSSSIADNLKSASLVISHAGSGSIF 292
           D+FTFSSSIADNL+SASLVISHAGSGSIF
Sbjct: 62  DFFTFSSSIADNLRSASLVISHAGSGSIF 90


>ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|222838269|gb|EEE76634.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/88 (77%), Positives = 77/88 (87%)
 Frame = +2

Query: 29  KTVFVTVGTTSFDTLVKVVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSAGEDGCLAMD 208
           K VFVTVGTT FD LV+ VDTK+VK+EL R GYTHL+IQMGRGS+ P KS G+DG LA+D
Sbjct: 13  KVVFVTVGTTLFDALVRTVDTKEVKQELLRNGYTHLIIQMGRGSYTPAKSEGKDGSLAVD 72

Query: 209 YFTFSSSIADNLKSASLVISHAGSGSIF 292
           YFTFS SIAD+L+SASLVISHAGSGSIF
Sbjct: 73  YFTFSPSIADHLRSASLVISHAGSGSIF 100


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