BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017709
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   120   7e-25
ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR...   117   6e-24
emb|CBI35579.3| unnamed protein product [Vitis vinifera]              117   6e-24
ref|XP_004161545.1| PREDICTED: LOW QUALITY PROTEIN: poly(A)-spec...   116   1e-23
ref|XP_004148964.1| PREDICTED: poly(A)-specific ribonuclease PAR...   116   1e-23

>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
           gi|223533357|gb|EEF35108.1| ribonuclease, putative
           [Ricinus communis]
          Length = 624

 Score =  120 bits (300), Expect = 7e-25
 Identities = 68/143 (47%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
 Frame = -2

Query: 740 EVSSRDLILLWGFSSGMPARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEF 561
           +VS +DL+ LWGF   M A  LKSLL  +H VF E+F++R +DKSCA+VVF +P  +   
Sbjct: 483 KVSCQDLVFLWGFRYRMSAGMLKSLLQQSHKVFSEEFDVRFVDKSCAIVVFWEPGLSNTL 542

Query: 560 LKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNLADSLDKSLAEQTDDILI 381
           L V+         LR+++SEG+RAA Y+ Y RVC   +   NLADSLDK+LA+ TD    
Sbjct: 543 LDVLKGSSEIVGPLREMVSEGVRAASYDTYNRVCRLGLWHENLADSLDKALAD-TDHPSD 601

Query: 380 SDS-KKAADVYWSSE-LIILDEL 318
           SDS   +++ YW  E +I LDEL
Sbjct: 602 SDSVTSSSNTYWCHEWMINLDEL 624


>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 515

 Score =  117 bits (292), Expect = 6e-24
 Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
 Frame = -2

Query: 740 EVSSRDLILLWGFSSGMPARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEF 561
           +VSS  L+ +WGF   M A  LK LL G+H VF E+F++R++D SCA+VVF +   ++ F
Sbjct: 372 KVSSEGLVFIWGFRGRMSAGGLKRLLQGSHSVFSEEFDVRMVDGSCAIVVFWQSGLSQTF 431

Query: 560 LKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNLADSLDKSLAEQTDDILI 381
           L+ I S  +    LR+++SEGLRAA YE YK  C     E +LADSLDK+L E+ D    
Sbjct: 432 LEAISSNWIS-GLLREMVSEGLRAAGYETYKNACRLGFWEADLADSLDKAL-EEPDHNSE 489

Query: 380 SDSKK----AADVYWSSELII-LDEL 318
           +DS+      + +YWS + II LDEL
Sbjct: 490 ADSEAKPTGPSQIYWSRDSIINLDEL 515


>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
          Length = 6458

 Score =  117 bits (292), Expect = 6e-24
 Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
 Frame = -2

Query: 740  EVSSRDLILLWGFSSGMPARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEF 561
            +VSS  L+ +WGF   M A  LK LL G+H VF E+F++R++D SCA+VVF +   ++ F
Sbjct: 6315 KVSSEGLVFIWGFRGRMSAGGLKRLLQGSHSVFSEEFDVRMVDGSCAIVVFWQSGLSQTF 6374

Query: 560  LKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNLADSLDKSLAEQTDDILI 381
            L+ I S  +    LR+++SEGLRAA YE YK  C     E +LADSLDK+L E+ D    
Sbjct: 6375 LEAISSNWIS-GLLREMVSEGLRAAGYETYKNACRLGFWEADLADSLDKAL-EEPDHNSE 6432

Query: 380  SDSKK----AADVYWSSELII-LDEL 318
            +DS+      + +YWS + II LDEL
Sbjct: 6433 ADSEAKPTGPSQIYWSRDSIINLDEL 6458


>ref|XP_004161545.1| PREDICTED: LOW QUALITY PROTEIN: poly(A)-specific ribonuclease
           PARN-like [Cucumis sativus]
          Length = 610

 Score =  116 bits (290), Expect = 1e-23
 Identities = 54/113 (47%), Positives = 81/113 (71%)
 Frame = -2

Query: 740 EVSSRDLILLWGFSSGMPARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEF 561
           +VS R L+ LWG   G+ AR LK+ L GTH+VF E+F++R +DK CA+VVF +P  +E F
Sbjct: 476 KVSCRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETF 535

Query: 560 LKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNLADSLDKSLAE 402
           L  I S  +   +LR+++SEGLRAA YE YK++C+  + E +LA+SL++++ E
Sbjct: 536 LDAINSDNI-VGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILE 587


>ref|XP_004148964.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis
           sativus]
          Length = 610

 Score =  116 bits (290), Expect = 1e-23
 Identities = 54/113 (47%), Positives = 81/113 (71%)
 Frame = -2

Query: 740 EVSSRDLILLWGFSSGMPARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEF 561
           +VS R L+ LWG   G+ AR LK+ L GTH+VF E+F++R +DK CA+VVF +P  +E F
Sbjct: 476 KVSCRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETF 535

Query: 560 LKVIGSGGVGYDALRDLISEGLRAAEYEAYKRVCASAILETNLADSLDKSLAE 402
           L  I S  +   +LR+++SEGLRAA YE YK++C+  + E +LA+SL++++ E
Sbjct: 536 LDAINSDNI-VGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILE 587