BLASTX nr result

ID: Coptis23_contig00017703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017703
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68010.1| hypothetical protein VITISV_043604 [Vitis vinifera]   149   1e-33
ref|XP_003633178.1| PREDICTED: uncharacterized protein LOC100854...   147   3e-33
emb|CBI36594.3| unnamed protein product [Vitis vinifera]              147   3e-33
ref|XP_003535705.1| PREDICTED: putative fasciclin-like arabinoga...    82   1e-13
ref|XP_003631181.1| PREDICTED: LOW QUALITY PROTEIN: putative fas...    79   2e-12

>emb|CAN68010.1| hypothetical protein VITISV_043604 [Vitis vinifera]
          Length = 249

 Score =  149 bits (375), Expect = 1e-33
 Identities = 83/187 (44%), Positives = 112/187 (59%), Gaps = 17/187 (9%)
 Frame = +3

Query: 159 PTQGETSTA-------DHNQGVLQVQKVVKALSDADYNAMSXXXXXXXXXXINSKK---N 308
           PT  E  TA        H   V  ++ +  ALSD  Y +M+          +   +   +
Sbjct: 20  PTVSEFPTARATEPXTSHEIEVFNIEAISNALSDKGYLSMALSLQLALKSNLIPSEVSDD 79

Query: 309 ASVITIFSPPDKAFFSLKYPQPPLTLLEYHVAPMELDRDILKSSFGLGSKIDTLLHGHPL 488
            + +TIF PP+KAF  LKYPQPPLTLL+Y ++P EL+R+ L+SS G  +K+ T L GH L
Sbjct: 80  NTRVTIFCPPNKAFSELKYPQPPLTLLQYQISPSELNREALESSLGPDAKVHTXLSGHSL 139

Query: 489 VVSTLPHAESDSINNVKITQWNIYNDGHVIVHGVDDFFDPAYQTILSP------DGVISN 650
           V++T P +   SIN VKIT+W++YNDG VIVH V+DFFDPA+QT+  P      D VI N
Sbjct: 140 VITTEPGSRETSINEVKITEWDVYNDGSVIVHAVEDFFDPAFQTLRHPWYDDDNDKVIKN 199

Query: 651 SSR-PSE 668
             R PS+
Sbjct: 200 DERGPSQ 206


>ref|XP_003633178.1| PREDICTED: uncharacterized protein LOC100854114 [Vitis vinifera]
          Length = 249

 Score =  147 bits (371), Expect = 3e-33
 Identities = 81/179 (45%), Positives = 111/179 (62%), Gaps = 10/179 (5%)
 Frame = +3

Query: 162 TQGETSTADHNQGVLQVQKVVKALSDADYNAMSXXXXXXXXXXI---NSKKNASVITIFS 332
           T+ ETS   H   V  ++ +  ALSD  Y +M+          +     + + + +TIF 
Sbjct: 31  TEPETS---HEIEVFNIEAISNALSDKGYLSMALSLQLALKSNLIPSEVRDDNTRVTIFC 87

Query: 333 PPDKAFFSLKYPQPPLTLLEYHVAPMELDRDILKSSFGLGSKIDTLLHGHPLVVSTLPHA 512
           PP+KAF  LKYPQPPLTLL+Y ++P EL+R+ L+SS G  +K+ TLL GH LV++T P +
Sbjct: 88  PPNKAFSELKYPQPPLTLLQYQISPSELNREALESSLGPDAKVHTLLSGHSLVITTEPGS 147

Query: 513 ESDSINNVKITQWNIYNDGHVIVHGVDDFFDPAYQTILSP------DGVISNSSR-PSE 668
              SIN VKIT+W++YNDG VIVH V+DFFD A+QT+  P      D  I N  R PS+
Sbjct: 148 RETSINEVKITEWDVYNDGSVIVHAVEDFFDRAFQTLRHPWYDDDNDKAIKNDERGPSQ 206


>emb|CBI36594.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score =  147 bits (371), Expect = 3e-33
 Identities = 81/179 (45%), Positives = 111/179 (62%), Gaps = 10/179 (5%)
 Frame = +3

Query: 162 TQGETSTADHNQGVLQVQKVVKALSDADYNAMSXXXXXXXXXXI---NSKKNASVITIFS 332
           T+ ETS   H   V  ++ +  ALSD  Y +M+          +     + + + +TIF 
Sbjct: 48  TEPETS---HEIEVFNIEAISNALSDKGYLSMALSLQLALKSNLIPSEVRDDNTRVTIFC 104

Query: 333 PPDKAFFSLKYPQPPLTLLEYHVAPMELDRDILKSSFGLGSKIDTLLHGHPLVVSTLPHA 512
           PP+KAF  LKYPQPPLTLL+Y ++P EL+R+ L+SS G  +K+ TLL GH LV++T P +
Sbjct: 105 PPNKAFSELKYPQPPLTLLQYQISPSELNREALESSLGPDAKVHTLLSGHSLVITTEPGS 164

Query: 513 ESDSINNVKITQWNIYNDGHVIVHGVDDFFDPAYQTILSP------DGVISNSSR-PSE 668
              SIN VKIT+W++YNDG VIVH V+DFFD A+QT+  P      D  I N  R PS+
Sbjct: 165 RETSINEVKITEWDVYNDGSVIVHAVEDFFDRAFQTLRHPWYDDDNDKAIKNDERGPSQ 223


>ref|XP_003535705.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like
           [Glycine max]
          Length = 262

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 54/146 (36%), Positives = 77/146 (52%)
 Frame = +3

Query: 231 LSDADYNAMSXXXXXXXXXXINSKKNASVITIFSPPDKAFFSLKYPQPPLTLLEYHVAPM 410
           LSD+ Y +M+          +    +A   T+F+P D AF   K  QP L LL +H++P+
Sbjct: 35  LSDSGYVSMALTLEIVAETLLEQSPSA---TVFAPSDSAF--KKSGQPSLDLLRFHLSPL 89

Query: 411 ELDRDILKSSFGLGSKIDTLLHGHPLVVSTLPHAESDSINNVKITQWNIYNDGHVIVHGV 590
            L    L+     GSKI T+L G  L V+T       S NN+K+T   IY+DG ++V+G+
Sbjct: 90  PLPPASLRL-LTAGSKIPTMLPGQTLTVTTSSSDRVTSFNNIKLTGSPIYDDGILLVYGI 148

Query: 591 DDFFDPAYQTILSPDGVISNSSRPSE 668
           D FFDP +Q          NS RPS+
Sbjct: 149 DRFFDPTFQ---------FNSQRPSD 165


>ref|XP_003631181.1| PREDICTED: LOW QUALITY PROTEIN: putative fasciclin-like
           arabinogalactan protein 20-like [Vitis vinifera]
          Length = 294

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 47/131 (35%), Positives = 75/131 (57%)
 Frame = +3

Query: 231 LSDADYNAMSXXXXXXXXXXINSKKNASVITIFSPPDKAFFSLKYPQPPLTLLEYHVAPM 410
           LSD+ Y +MS          +    +A   T+F+  D AF  ++  QPPL+LL++H +P+
Sbjct: 33  LSDSGYVSMSLTLELVSQTLLPKSPSA---TLFAASDAAF--IESGQPPLSLLQFHSSPL 87

Query: 411 ELDRDILKSSFGLGSKIDTLLHGHPLVVSTLPHAESDSINNVKITQWNIYNDGHVIVHGV 590
            L  + L SS  +G+KI T+   H L+V++       S+NNV IT   +++DG +I+ GV
Sbjct: 88  ALSFESL-SSPPVGAKIPTMFANHSLIVTSXASDSQISLNNVNITSSPLFDDGSLIIFGV 146

Query: 591 DDFFDPAYQTI 623
           D FFDP +  +
Sbjct: 147 DKFFDPNFPAL 157


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