BLASTX nr result

ID: Coptis23_contig00017697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017697
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546211.1| PREDICTED: pleiotropic drug resistance prote...   155   2e-36
gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]     153   2e-35
gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axill...   153   2e-35
ref|XP_003526427.1| PREDICTED: pleiotropic drug resistance prote...   152   3e-35
ref|XP_003522631.1| PREDICTED: pleiotropic drug resistance prote...   151   5e-35

>ref|XP_003546211.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1418

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/123 (56%), Positives = 89/123 (72%)
 Frame = -3

Query: 384  LFRVVGGVSRKMVIANXXXXXXXXXXXXXXXFIISRVDVPKFWIWGYWISPLTYAQNALA 205
            LFR +  + R M+IAN               FI+SR DV K+WIWGYWISP+ Y QNA+ 
Sbjct: 646  LFRTIAAIGRNMIIANTFGSFAIVTLLTLGGFILSREDVKKWWIWGYWISPIMYEQNAMM 705

Query: 204  VNEFFGGSWSHILPNSTQTLGIKILESRGVFTNPNWYWIGAGALIAYIVLFNIIFILSLA 25
            VNEF G SWSH+LPNST++LG+++L+SRG FT+ +WYWIGAGAL+ ++VL NI F L+L 
Sbjct: 706  VNEFLGQSWSHVLPNSTESLGVEVLKSRGFFTHASWYWIGAGALLGFVVLLNITFTLALT 765

Query: 24   YLN 16
            YLN
Sbjct: 766  YLN 768


>gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]
          Length = 1452

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/131 (54%), Positives = 94/131 (71%), Gaps = 3/131 (2%)
 Frame = -3

Query: 384  LFRVVGGVSRKMVIANXXXXXXXXXXXXXXXFIISRVDVPKFWIWGYWISPLTYAQNALA 205
            LFR++G + R +++AN               F++SR DV K+WIWGYWISP+ YAQNA+A
Sbjct: 653  LFRLMGALGRNIIVANTFGSFVLLTVLVMGGFVLSRDDVKKWWIWGYWISPMMYAQNAIA 712

Query: 204  VNEFFGGSWSHILPN--STQTLGIKILESRGVFTNPNWYWIGAGALIAYIVLFNIIFILS 31
            VNEF G SW+H+ PN  ST+TLG+  L+SRG+F +  WYWIGAGALI Y+ LFN +F ++
Sbjct: 713  VNEFLGKSWAHVPPNSTSTETLGVSFLKSRGIFPDARWYWIGAGALIGYVFLFNFLFAVA 772

Query: 30   LAYLN-FGRTQ 1
            LAYLN FG+ Q
Sbjct: 773  LAYLNPFGKPQ 783


>gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axillaris]
          Length = 1452

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/131 (54%), Positives = 94/131 (71%), Gaps = 3/131 (2%)
 Frame = -3

Query: 384  LFRVVGGVSRKMVIANXXXXXXXXXXXXXXXFIISRVDVPKFWIWGYWISPLTYAQNALA 205
            LFR++G + R +++AN               F++SR DV K+WIWGYWISP+ YAQNA+A
Sbjct: 653  LFRLMGALGRNIIVANTFGSFVLLTVLVMGGFVLSRDDVKKWWIWGYWISPMMYAQNAIA 712

Query: 204  VNEFFGGSWSHILPN--STQTLGIKILESRGVFTNPNWYWIGAGALIAYIVLFNIIFILS 31
            VNEF G SW+H+ PN  ST+TLG+  L+SRG+F +  WYWIGAGALI Y+ LFN +F ++
Sbjct: 713  VNEFLGKSWAHVPPNSTSTETLGVSFLKSRGIFPDARWYWIGAGALIGYVFLFNFLFAVA 772

Query: 30   LAYLN-FGRTQ 1
            LAYLN FG+ Q
Sbjct: 773  LAYLNPFGKPQ 783


>ref|XP_003526427.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1448

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/129 (54%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384  LFRVVGGVSRKMVIANXXXXXXXXXXXXXXXFIISRVDVPKFWIWGYWISPLTYAQNALA 205
            LFR +G V R +++AN               FI+SRVDV K+W+WGYW SP+ Y QNALA
Sbjct: 651  LFRFMGAVGRNIIVANTVGSFALLAVMVMGGFILSRVDVKKWWLWGYWFSPMMYGQNALA 710

Query: 204  VNEFFGGSWSHILPNSTQTLGIKILESRGVFTNPNWYWIGAGALIAYIVLFNIIFILSLA 25
            VNEF G SWSH+ PNST+ LG+K+L+SRG+F    WYWIG GA I Y++LFN +F L+L 
Sbjct: 711  VNEFLGKSWSHVTPNSTEPLGVKVLKSRGIFPKAYWYWIGVGASIGYMLLFNFLFPLALH 770

Query: 24   YLN-FGRTQ 1
            YL+ FG+ Q
Sbjct: 771  YLDPFGKPQ 779


>ref|XP_003522631.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1449

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/129 (54%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384  LFRVVGGVSRKMVIANXXXXXXXXXXXXXXXFIISRVDVPKFWIWGYWISPLTYAQNALA 205
            LFR +G V R +++AN               FI+SRVDV K+W+WGYW SP+ Y QNALA
Sbjct: 652  LFRFMGAVGRNIIVANTVGSFALLAVMVMGGFILSRVDVKKWWLWGYWFSPMMYGQNALA 711

Query: 204  VNEFFGGSWSHILPNSTQTLGIKILESRGVFTNPNWYWIGAGALIAYIVLFNIIFILSLA 25
            VNEF G SWSH+ PNST+ LG+K+L+SRG+F    WYWIG GA I Y++LFN +F L+L 
Sbjct: 712  VNEFLGKSWSHVPPNSTEPLGVKVLKSRGIFPEAYWYWIGVGASIGYMLLFNFLFPLALH 771

Query: 24   YLN-FGRTQ 1
            YL+ FG+ Q
Sbjct: 772  YLDPFGKPQ 780


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