BLASTX nr result

ID: Coptis23_contig00017684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017684
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]           165   3e-39
ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis v...   162   3e-38
emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]   162   3e-38
gb|ABB55384.1| importin alpha 1-like [Solanum tuberosum]              160   1e-37

>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/114 (70%), Positives = 90/114 (78%)
 Frame = -2

Query: 379 YLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCG 200
           +L +QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKEMG +GGVN +AQMVD+C 
Sbjct: 412 FLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEMGLNGGVNLYAQMVDECD 471

Query: 199 GLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXEQNFQDGVDGTPQGFNFGSD 38
           GLDKIENLQ+HDNNEIYEKAVK            E   QDG DG  QGF FG++
Sbjct: 472 GLDKIENLQTHDNNEIYEKAVKILERYWAEEEDGEPIVQDGGDGNQQGFAFGTN 525


>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
          Length = 535

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/114 (69%), Positives = 91/114 (79%)
 Frame = -2

Query: 379 YLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCG 200
           +LA+QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G +GG+N +AQM+D+C 
Sbjct: 411 FLASQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEMDKETGANGGINLYAQMIDECE 470

Query: 199 GLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXEQNFQDGVDGTPQGFNFGSD 38
           GLDKIENLQ+HDNNEIYEK VK            EQN  DGVDG  QGF FG++
Sbjct: 471 GLDKIENLQTHDNNEIYEKTVK-ILEKYWAEEDEEQNLPDGVDGNQQGFQFGNN 523


>ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296089795|emb|CBI39614.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/113 (68%), Positives = 89/113 (78%)
 Frame = -2

Query: 379 YLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCG 200
           +L +QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G++GG+N +AQM+D+C 
Sbjct: 411 FLVSQGCIKPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDECD 470

Query: 199 GLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXEQNFQDGVDGTPQGFNFGS 41
           GLDKIE LQ+HDNNEIYEK+VK             QN QDG DG  QGF FGS
Sbjct: 471 GLDKIELLQTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDG-DGNQQGFGFGS 522


>emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]
          Length = 523

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/113 (68%), Positives = 89/113 (78%)
 Frame = -2

Query: 379 YLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCG 200
           +L +QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G++GG+N +AQM+D+C 
Sbjct: 399 FLVSQGCIKPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDECD 458

Query: 199 GLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXEQNFQDGVDGTPQGFNFGS 41
           GLDKIE LQ+HDNNEIYEK+VK             QN QDG DG  QGF FGS
Sbjct: 459 GLDKIELLQTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDG-DGNQQGFGFGS 510


>gb|ABB55384.1| importin alpha 1-like [Solanum tuberosum]
          Length = 445

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/114 (66%), Positives = 89/114 (78%)
 Frame = -2

Query: 379 YLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDCG 200
           +LA+QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G +GG+N +AQ +D+C 
Sbjct: 331 FLASQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEVDKEAGANGGINLYAQTIDECD 390

Query: 199 GLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXEQNFQDGVDGTPQGFNFGSD 38
           GLDKIENLQ+HDNNE+YEKAVK            EQN  DG DG   GF FG++
Sbjct: 391 GLDKIENLQTHDNNELYEKAVK-ILEKYWAEEDEEQNLPDGADGNQLGFQFGNN 443


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