BLASTX nr result

ID: Coptis23_contig00017673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017673
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466941.1| hypothetical protein SORBIDRAFT_01g017140 [S...   223   2e-56
gb|EEC67310.1| hypothetical protein OsI_34318 [Oryza sativa Indi...   221   6e-56
ref|XP_002327878.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55
gb|ABB47885.1| Electron transfer flavoprotein-ubiquinone oxidore...   219   2e-55
gb|ABB47884.1| Electron transfer flavoprotein-ubiquinone oxidore...   219   2e-55

>ref|XP_002466941.1| hypothetical protein SORBIDRAFT_01g017140 [Sorghum bicolor]
           gi|241920795|gb|EER93939.1| hypothetical protein
           SORBIDRAFT_01g017140 [Sorghum bicolor]
          Length = 586

 Score =  223 bits (567), Expect = 2e-56
 Identities = 98/117 (83%), Positives = 106/117 (90%)
 Frame = +3

Query: 3   SLHSPIQYLKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESR 182
           +LH PIQY KPDG I++DVPTSLYRSNTNH HDQP HLRLRDP IPE +N+P YAGPESR
Sbjct: 470 NLHVPIQYPKPDGQITFDVPTSLYRSNTNHEHDQPPHLRLRDPTIPEQVNVPLYAGPESR 529

Query: 183 YCPARVYEYIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 353
           YCPARVYEY+ D++G PKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 530 YCPARVYEYVSDEKGDPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM 586


>gb|EEC67310.1| hypothetical protein OsI_34318 [Oryza sativa Indica Group]
          Length = 582

 Score =  221 bits (562), Expect = 6e-56
 Identities = 98/117 (83%), Positives = 105/117 (89%)
 Frame = +3

Query: 3   SLHSPIQYLKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESR 182
           SLHSPIQY KPDG IS+DVPTSLYRS+TNH HDQP HLRLRDP +PE +NLP YAGPESR
Sbjct: 466 SLHSPIQYPKPDGQISFDVPTSLYRSSTNHEHDQPPHLRLRDPTVPERVNLPLYAGPESR 525

Query: 183 YCPARVYEYIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 353
           YCPARVYEY+ D++G  KL INAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 526 YCPARVYEYVTDEKGDQKLHINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM 582


>ref|XP_002327878.1| predicted protein [Populus trichocarpa] gi|222837287|gb|EEE75666.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  219 bits (558), Expect = 2e-55
 Identities = 98/116 (84%), Positives = 105/116 (90%)
 Frame = +3

Query: 6   LHSPIQYLKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESRY 185
           LHSPI+Y KPDG+ S+DVPTSL+RSNTNH HDQPAHLRL+DP IPE +NLP YAGPESRY
Sbjct: 309 LHSPIEYPKPDGVFSFDVPTSLHRSNTNHDHDQPAHLRLKDPKIPETLNLPEYAGPESRY 368

Query: 186 CPARVYEYIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 353
           CPARVYEYI D+  Q KLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 369 CPARVYEYISDENSQLKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYSVM 424


>gb|ABB47885.1| Electron transfer flavoprotein-ubiquinone
           oxidoreductase,mitochondrial precursor, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 572

 Score =  219 bits (557), Expect = 2e-55
 Identities = 97/117 (82%), Positives = 104/117 (88%)
 Frame = +3

Query: 3   SLHSPIQYLKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESR 182
           SLHSPIQY KPDG IS+DVPTSLYRS+TNH HDQP HLRLRDP +PE +NLP YAGPES 
Sbjct: 456 SLHSPIQYPKPDGQISFDVPTSLYRSSTNHEHDQPPHLRLRDPTVPERVNLPLYAGPESH 515

Query: 183 YCPARVYEYIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 353
           YCPARVYEY+ D++G  KL INAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 516 YCPARVYEYVTDEKGDQKLHINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM 572


>gb|ABB47884.1| Electron transfer flavoprotein-ubiquinone
           oxidoreductase,mitochondrial precursor, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 575

 Score =  219 bits (557), Expect = 2e-55
 Identities = 97/117 (82%), Positives = 104/117 (88%)
 Frame = +3

Query: 3   SLHSPIQYLKPDGMISYDVPTSLYRSNTNHAHDQPAHLRLRDPAIPELINLPHYAGPESR 182
           SLHSPIQY KPDG IS+DVPTSLYRS+TNH HDQP HLRLRDP +PE +NLP YAGPES 
Sbjct: 459 SLHSPIQYPKPDGQISFDVPTSLYRSSTNHEHDQPPHLRLRDPTVPERVNLPLYAGPESH 518

Query: 183 YCPARVYEYIKDDEGQPKLQINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYLVM 353
           YCPARVYEY+ D++G  KL INAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGY VM
Sbjct: 519 YCPARVYEYVTDEKGDQKLHINAQNCLHCKACDIKDPKQNIEWTVPEGGGGPGYTVM 575


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