BLASTX nr result

ID: Coptis23_contig00017659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017659
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17350.3| unnamed protein product [Vitis vinifera]              234   6e-60
ref|XP_002265248.1| PREDICTED: histidine kinase 1-like [Vitis vi...   234   6e-60
ref|XP_002529646.1| histidine kinase 1 plant, putative [Ricinus ...   232   2e-59
emb|CAI78447.1| osmosensor histidine-aspartate kinase [Populus x...   224   5e-57
ref|XP_002327653.1| histidine kinase osmosensor protein [Populus...   224   5e-57

>emb|CBI17350.3| unnamed protein product [Vitis vinifera]
          Length = 1168

 Score =  234 bits (597), Expect = 6e-60
 Identities = 118/164 (71%), Positives = 136/164 (82%)
 Frame = -3

Query: 492 MGSQGRRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNCLSSYYSVFVARL 313
           MGS  RR  +R+  F      N  P GRR +FH+EV++EEF Y + +CLSSYYSVFVARL
Sbjct: 1   MGSHLRRVFNRISGFVSPWRRNQAPHGRR-IFHREVQQEEFQYPSNSCLSSYYSVFVARL 59

Query: 312 AIMVMLAILIGMLTVLTWHFTKSYTTKSINTLAYGLRYELLQRPILRMWNILNSTVEITQ 133
           AIMVMLAILIG+LT+LTWHFT+ YTTKSIN+LAYGLRYELLQRPILRMWNILNSTVEIT 
Sbjct: 60  AIMVMLAILIGLLTILTWHFTRIYTTKSINSLAYGLRYELLQRPILRMWNILNSTVEITT 119

Query: 132 AQVKLSEFVIRQYDSPVMQAAHLECYEVMRNVTWALFASRRALN 1
           AQVKLSE+VI++Y  P  QA  +E YEVMR+VTWALFASR+ALN
Sbjct: 120 AQVKLSEYVIKRYSKPTTQAQQVELYEVMRDVTWALFASRKALN 163


>ref|XP_002265248.1| PREDICTED: histidine kinase 1-like [Vitis vinifera]
          Length = 1235

 Score =  234 bits (597), Expect = 6e-60
 Identities = 118/164 (71%), Positives = 136/164 (82%)
 Frame = -3

Query: 492 MGSQGRRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNCLSSYYSVFVARL 313
           MGS  RR  +R+  F      N  P GRR +FH+EV++EEF Y + +CLSSYYSVFVARL
Sbjct: 1   MGSHLRRVFNRISGFVSPWRRNQAPHGRR-IFHREVQQEEFQYPSNSCLSSYYSVFVARL 59

Query: 312 AIMVMLAILIGMLTVLTWHFTKSYTTKSINTLAYGLRYELLQRPILRMWNILNSTVEITQ 133
           AIMVMLAILIG+LT+LTWHFT+ YTTKSIN+LAYGLRYELLQRPILRMWNILNSTVEIT 
Sbjct: 60  AIMVMLAILIGLLTILTWHFTRIYTTKSINSLAYGLRYELLQRPILRMWNILNSTVEITT 119

Query: 132 AQVKLSEFVIRQYDSPVMQAAHLECYEVMRNVTWALFASRRALN 1
           AQVKLSE+VI++Y  P  QA  +E YEVMR+VTWALFASR+ALN
Sbjct: 120 AQVKLSEYVIKRYSKPTTQAQQVELYEVMRDVTWALFASRKALN 163


>ref|XP_002529646.1| histidine kinase 1 plant, putative [Ricinus communis]
           gi|223530872|gb|EEF32733.1| histidine kinase 1 plant,
           putative [Ricinus communis]
          Length = 1206

 Score =  232 bits (592), Expect = 2e-59
 Identities = 116/167 (69%), Positives = 142/167 (85%), Gaps = 1/167 (0%)
 Frame = -3

Query: 498 AKMGSQG-RRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNCLSSYYSVFV 322
           A MGS   R+  D++  F+ S+  NT+PRGRR +FH++V+E+EF YANT+CLSSYYSVFV
Sbjct: 21  APMGSPPIRKVFDKILTFAPSLRSNTLPRGRR-IFHRDVEEDEFQYANTHCLSSYYSVFV 79

Query: 321 ARLAIMVMLAILIGMLTVLTWHFTKSYTTKSINTLAYGLRYELLQRPILRMWNILNSTVE 142
            RLAIMVMLAILIG+LT+LTWHFTKSYT +S++TLA GLRYELLQRPILRMWNILNST E
Sbjct: 80  VRLAIMVMLAILIGLLTILTWHFTKSYTKRSLDTLASGLRYELLQRPILRMWNILNSTSE 139

Query: 141 ITQAQVKLSEFVIRQYDSPVMQAAHLECYEVMRNVTWALFASRRALN 1
           IT AQVKLSE+VI++Y +   QA  +E YEVM++VTWA+FASR+ALN
Sbjct: 140 ITTAQVKLSEYVIKRYSNSATQAEQVELYEVMKDVTWAMFASRKALN 186


>emb|CAI78447.1| osmosensor histidine-aspartate kinase [Populus x canadensis]
          Length = 1249

 Score =  224 bits (572), Expect = 5e-57
 Identities = 115/176 (65%), Positives = 141/176 (80%)
 Frame = -3

Query: 528 SSSVSFQSPVAKMGSQGRRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNC 349
           S +VS  +P+  M +  R+  +R+  F+ S  +NT P GRR +FH+EV++ EF Y NT+C
Sbjct: 13  SPTVSTGTPI--MATPLRKVCNRILGFATSCRKNTAPYGRR-IFHREVEQGEFQYGNTHC 69

Query: 348 LSSYYSVFVARLAIMVMLAILIGMLTVLTWHFTKSYTTKSINTLAYGLRYELLQRPILRM 169
           LSSYYSVFV RLAIM MLAILIG+LT+LTWHFT+SYT KS++TLA GLRYELLQRPILRM
Sbjct: 70  LSSYYSVFVVRLAIMAMLAILIGLLTILTWHFTRSYTKKSLDTLASGLRYELLQRPILRM 129

Query: 168 WNILNSTVEITQAQVKLSEFVIRQYDSPVMQAAHLECYEVMRNVTWALFASRRALN 1
           WNILNST EIT AQVKLSE+VI +Y    +QA  +E YEVMR+VTWALF+SR+ALN
Sbjct: 130 WNILNSTAEITAAQVKLSEYVIGRYSKTTIQAEQVELYEVMRHVTWALFSSRKALN 185


>ref|XP_002327653.1| histidine kinase osmosensor protein [Populus trichocarpa]
           gi|222836738|gb|EEE75131.1| histidine kinase osmosensor
           protein [Populus trichocarpa]
          Length = 1258

 Score =  224 bits (572), Expect = 5e-57
 Identities = 112/176 (63%), Positives = 141/176 (80%)
 Frame = -3

Query: 528 SSSVSFQSPVAKMGSQGRRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNC 349
           S ++   +P+  M +  R+   R+  F+ S  +NT P GRR +F+++V+++EF Y NT+C
Sbjct: 20  SPTIGTDTPI--MATPLRKVCARILGFASSCRKNTAPYGRR-IFYRDVEQDEFQYGNTHC 76

Query: 348 LSSYYSVFVARLAIMVMLAILIGMLTVLTWHFTKSYTTKSINTLAYGLRYELLQRPILRM 169
           LSSYYSVFV RLAIM MLAILIG+LT+LTWHFT+SYT KS++TLA GLRYE+LQRPILRM
Sbjct: 77  LSSYYSVFVVRLAIMAMLAILIGLLTILTWHFTRSYTKKSLDTLASGLRYEILQRPILRM 136

Query: 168 WNILNSTVEITQAQVKLSEFVIRQYDSPVMQAAHLECYEVMRNVTWALFASRRALN 1
           WNILNST EIT AQVKLSE+VIR+Y  P  QA  +E YEVMR++TWALFASR+ALN
Sbjct: 137 WNILNSTAEITAAQVKLSEYVIRRYSKPTNQAEQVELYEVMRDITWALFASRKALN 192


Top