BLASTX nr result

ID: Coptis23_contig00017658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017658
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20136.3| unnamed protein product [Vitis vinifera]               58   8e-12
ref|XP_002524511.1| ATP binding protein, putative [Ricinus commu...    59   1e-11
ref|XP_002524514.1| ATP binding protein, putative [Ricinus commu...    59   3e-11
ref|XP_002283578.2| PREDICTED: probable leucine-rich repeat rece...    58   5e-11
ref|XP_003634703.1| PREDICTED: probable leucine-rich repeat rece...    58   5e-11

>emb|CBI20136.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score = 57.8 bits (138), Expect(2) = 8e-12
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = -3

Query: 503 PTLRPMMSSVVSMLEGQTAVQKVASGSGISSDDMKFKAIRNQYQQILDPSMNDSQTQSMS 324
           P  RP MSSVVS+LEG+  VQ+++SG  ISSD++K K +R QY      + ++ Q   +S
Sbjct: 621 PVARPTMSSVVSILEGRAHVQEISSGLSISSDEIKLKELRQQYDLYHAKNTSEGQIPCLS 680

Query: 323 MEAP 312
            + P
Sbjct: 681 TDGP 684



 Score = 37.0 bits (84), Expect(2) = 8e-12
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = -1

Query: 244 TESSTSASDLYPVNPDSQYWKDRE 173
           T SSTS +DLYP+  +SQYW++R+
Sbjct: 686 TASSTSGADLYPITMNSQYWENRD 709


>ref|XP_002524511.1| ATP binding protein, putative [Ricinus communis]
            gi|223536185|gb|EEF37838.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 985

 Score = 59.3 bits (142), Expect(2) = 1e-11
 Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = -3

Query: 494  RPMMSSVVSMLEGQTAVQK-VASGSGISSDDMKFKAIRNQYQQILDPSMNDSQTQSMSME 318
            RP MSSVVS+LEG+T VQ  V   S +S D+ K +A+R  +Q  ++   ++SQTQSMS++
Sbjct: 899  RPAMSSVVSILEGKTTVQDLVLDDSNVSHDEKKIEAMRKHFQHNIESQTSESQTQSMSLD 958

Query: 317  AP 312
             P
Sbjct: 959  GP 960



 Score = 35.0 bits (79), Expect(2) = 1e-11
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -1

Query: 244  TESSTSASDLYPVNPDSQYWKDRE 173
            T SS+SA DLYP+  DS YW+ R+
Sbjct: 962  TGSSSSAGDLYPITLDSNYWESRK 985


>ref|XP_002524514.1| ATP binding protein, putative [Ricinus communis]
            gi|223536188|gb|EEF37841.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1007

 Score = 58.9 bits (141), Expect(2) = 3e-11
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = -3

Query: 503  PTLRPMMSSVVSMLEGQTAVQKVASGSGISSDDMKFKAIRNQYQQILDPSMNDSQTQSMS 324
            P +RP MSSVVSMLEG+T VQ     +  S D+MK +A+   +Q  ++   ++SQ QSMS
Sbjct: 919  PGVRPAMSSVVSMLEGKTVVQDFTQETSSSFDEMKDEAMSKHFQHSIEHKTSESQIQSMS 978

Query: 323  MEAP 312
            ++ P
Sbjct: 979  LDGP 982



 Score = 33.9 bits (76), Expect(2) = 3e-11
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 238  SSTSASDLYPVNPDSQYWKDR 176
            SSTS  DLYPV  DS YW++R
Sbjct: 986  SSTSEQDLYPVTLDSNYWENR 1006


>ref|XP_002283578.2| PREDICTED: probable leucine-rich repeat receptor-like
            serine/threonine-protein kinase At3g14840-like [Vitis
            vinifera]
          Length = 1011

 Score = 58.2 bits (139), Expect(2) = 5e-11
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = -3

Query: 497  LRPMMSSVVSMLEGQTAVQKVASGSGISSDDMKFKAIRNQYQQILDPSMNDSQTQSMSM 321
            +RP MSSVVSMLEG+TAVQ + S     SDD+K + ++  Y+ I + SM  S++++ SM
Sbjct: 925  VRPAMSSVVSMLEGRTAVQDIVSDPSAPSDDLKLEEMKEHYRHIQEKSMGVSESKAQSM 983



 Score = 33.9 bits (76), Expect(2) = 5e-11
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -1

Query: 238  SSTSASDLYPVNPDSQYWKDRE 173
            +S+S  DLYPVN DS+YW+ R+
Sbjct: 990  ASSSIPDLYPVNLDSEYWEKRD 1011


>ref|XP_003634703.1| PREDICTED: probable leucine-rich repeat receptor-like
            serine/threonine-protein kinase At3g14840-like [Vitis
            vinifera]
          Length = 1007

 Score = 58.2 bits (139), Expect(2) = 5e-11
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = -3

Query: 497  LRPMMSSVVSMLEGQTAVQKVASGSGISSDDMKFKAIRNQYQQILDPSMNDSQTQSMSM 321
            +RP MSSVVSMLEG+TAVQ + S     SDD+K + ++  Y+ I + SM  S++++ SM
Sbjct: 921  VRPAMSSVVSMLEGRTAVQDIVSDPSAPSDDLKLEEMKEHYRHIQEKSMGVSESKAQSM 979



 Score = 33.9 bits (76), Expect(2) = 5e-11
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -1

Query: 238  SSTSASDLYPVNPDSQYWKDRE 173
            +S+S  DLYPVN DS+YW+ R+
Sbjct: 986  ASSSIPDLYPVNLDSEYWEKRD 1007


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