BLASTX nr result

ID: Coptis23_contig00017648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017648
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526679.1| DNA-damage-inducible protein f, putative [Ri...   125   5e-27
ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chl...   123   3e-26
ref|XP_003623384.1| MATE efflux family protein expressed [Medica...   123   3e-26
emb|CBI18108.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|XP_002862903.1| hypothetical protein ARALYDRAFT_497252 [Arab...   122   8e-26

>ref|XP_002526679.1| DNA-damage-inducible protein f, putative [Ricinus communis]
           gi|223533979|gb|EEF35701.1| DNA-damage-inducible protein
           f, putative [Ricinus communis]
          Length = 560

 Score =  125 bits (315), Expect = 5e-27
 Identities = 60/73 (82%), Positives = 66/73 (90%)
 Frame = -2

Query: 653 FVAASQPVNALAFVLDGLYYGVSDFAYAAYSMVLVGLITSMFLYFAAPVYGLAGVWMGLF 474
           FVA SQP+NA+AFVLDGLYYGVSDF YAAYSMVLVGLI+S F+  AAPVYGL GVW GLF
Sbjct: 464 FVAGSQPMNAIAFVLDGLYYGVSDFGYAAYSMVLVGLISSAFILAAAPVYGLPGVWTGLF 523

Query: 473 LFMSLRVVAGLWR 435
           LFM+LRVVAG+WR
Sbjct: 524 LFMTLRVVAGIWR 536


>ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chloroplastic [Vitis
           vinifera]
          Length = 561

 Score =  123 bits (309), Expect = 3e-26
 Identities = 59/73 (80%), Positives = 66/73 (90%)
 Frame = -2

Query: 653 FVAASQPVNALAFVLDGLYYGVSDFAYAAYSMVLVGLITSMFLYFAAPVYGLAGVWMGLF 474
           FVA SQP+NA+AFV+DGLYYGVSDF YAAYSMVLV LI+S+FL  AAPV GLAGVW GLF
Sbjct: 467 FVAGSQPMNAIAFVIDGLYYGVSDFGYAAYSMVLVALISSVFLLLAAPVCGLAGVWTGLF 526

Query: 473 LFMSLRVVAGLWR 435
           LFM+LRVVAG+WR
Sbjct: 527 LFMTLRVVAGIWR 539


>ref|XP_003623384.1| MATE efflux family protein expressed [Medicago truncatula]
           gi|355498399|gb|AES79602.1| MATE efflux family protein
           expressed [Medicago truncatula]
          Length = 566

 Score =  123 bits (309), Expect = 3e-26
 Identities = 60/76 (78%), Positives = 68/76 (89%)
 Frame = -2

Query: 653 FVAASQPVNALAFVLDGLYYGVSDFAYAAYSMVLVGLITSMFLYFAAPVYGLAGVWMGLF 474
           FVA SQPVNALAFV+DGLYYGVSDF YAAYSMVLVGLI+S+F+  AAPV GL GVW GLF
Sbjct: 475 FVAGSQPVNALAFVIDGLYYGVSDFEYAAYSMVLVGLISSVFMLVAAPVVGLPGVWAGLF 534

Query: 473 LFMSLRVVAGLWR*NS 426
           LFM+LRV+AG+WR +S
Sbjct: 535 LFMALRVLAGVWRLSS 550


>emb|CBI18108.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  123 bits (309), Expect = 3e-26
 Identities = 59/73 (80%), Positives = 66/73 (90%)
 Frame = -2

Query: 653 FVAASQPVNALAFVLDGLYYGVSDFAYAAYSMVLVGLITSMFLYFAAPVYGLAGVWMGLF 474
           FVA SQP+NA+AFV+DGLYYGVSDF YAAYSMVLV LI+S+FL  AAPV GLAGVW GLF
Sbjct: 464 FVAGSQPMNAIAFVIDGLYYGVSDFGYAAYSMVLVALISSVFLLLAAPVCGLAGVWTGLF 523

Query: 473 LFMSLRVVAGLWR 435
           LFM+LRVVAG+WR
Sbjct: 524 LFMTLRVVAGIWR 536


>ref|XP_002862903.1| hypothetical protein ARALYDRAFT_497252 [Arabidopsis lyrata subsp.
           lyrata] gi|297308672|gb|EFH39162.1| hypothetical protein
           ARALYDRAFT_497252 [Arabidopsis lyrata subsp. lyrata]
          Length = 413

 Score =  122 bits (305), Expect = 8e-26
 Identities = 56/73 (76%), Positives = 66/73 (90%)
 Frame = -2

Query: 653 FVAASQPVNALAFVLDGLYYGVSDFAYAAYSMVLVGLITSMFLYFAAPVYGLAGVWMGLF 474
           FVA SQPVNALAFVLDGLYYGVSDF +AAYSMV++GLI+S+F+  AAP +GLAG+W GLF
Sbjct: 322 FVAGSQPVNALAFVLDGLYYGVSDFGFAAYSMVILGLISSLFMLVAAPTFGLAGIWTGLF 381

Query: 473 LFMSLRVVAGLWR 435
           LFM+LR+VAG WR
Sbjct: 382 LFMALRLVAGAWR 394


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