BLASTX nr result

ID: Coptis23_contig00017634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017634
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141471.1| PREDICTED: probable tRNA (guanine(26)-N(2))-...   120   4e-48
ref|XP_004172498.1| PREDICTED: probable tRNA (guanine(26)-N(2))-...   120   4e-48
ref|XP_002306060.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-46
ref|XP_003544005.1| PREDICTED: probable N(2),N(2)-dimethylguanos...   116   2e-46
ref|XP_002330951.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-46

>ref|XP_004141471.1| PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase
           2-like [Cucumis sativus]
          Length = 581

 Score =  120 bits (302), Expect(2) = 4e-48
 Identities = 55/63 (87%), Positives = 60/63 (95%)
 Frame = +3

Query: 3   GIGQVVALDNDKVSVEACKRNIKYNGSVACEKVESHLVDARVFMLTHPKEFDVVDLDPYG 182
           G+GQVVALDNDK SVEAC+RNIK+NGSVAC KVESHL DARV+MLTHPKEFD+VDLDPYG
Sbjct: 152 GVGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLTDARVYMLTHPKEFDMVDLDPYG 211

Query: 183 SPS 191
           SPS
Sbjct: 212 SPS 214



 Score = 95.9 bits (237), Expect(2) = 4e-48
 Identities = 42/47 (89%), Positives = 46/47 (97%)
 Frame = +2

Query: 287 VFLDSAVQSVADGGILMCTATDLAVLCGGNGEVCYSKYGSYPLKGKY 427
           +FLDSAVQSV DGG+LMCTATD+AVLCGGNGEVCYSKYGSYPL+GKY
Sbjct: 215 IFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKY 261


>ref|XP_004172498.1| PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase
           2-like, partial [Cucumis sativus]
          Length = 340

 Score =  120 bits (302), Expect(2) = 4e-48
 Identities = 55/63 (87%), Positives = 60/63 (95%)
 Frame = +3

Query: 3   GIGQVVALDNDKVSVEACKRNIKYNGSVACEKVESHLVDARVFMLTHPKEFDVVDLDPYG 182
           G+GQVVALDNDK SVEAC+RNIK+NGSVAC KVESHL DARV+MLTHPKEFD+VDLDPYG
Sbjct: 152 GVGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLTDARVYMLTHPKEFDMVDLDPYG 211

Query: 183 SPS 191
           SPS
Sbjct: 212 SPS 214



 Score = 95.9 bits (237), Expect(2) = 4e-48
 Identities = 42/47 (89%), Positives = 46/47 (97%)
 Frame = +2

Query: 287 VFLDSAVQSVADGGILMCTATDLAVLCGGNGEVCYSKYGSYPLKGKY 427
           +FLDSAVQSV DGG+LMCTATD+AVLCGGNGEVCYSKYGSYPL+GKY
Sbjct: 215 IFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKY 261


>ref|XP_002306060.1| predicted protein [Populus trichocarpa] gi|222849024|gb|EEE86571.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  115 bits (288), Expect(2) = 1e-46
 Identities = 54/63 (85%), Positives = 59/63 (93%)
 Frame = +3

Query: 3   GIGQVVALDNDKVSVEACKRNIKYNGSVACEKVESHLVDARVFMLTHPKEFDVVDLDPYG 182
           GIG+VVALDNDK SVEAC++NIK+NGSVA  KVESHL DARV+MLTHPKEFDVVDLDPYG
Sbjct: 151 GIGKVVALDNDKASVEACQKNIKFNGSVAISKVESHLADARVYMLTHPKEFDVVDLDPYG 210

Query: 183 SPS 191
           SPS
Sbjct: 211 SPS 213



 Score = 96.3 bits (238), Expect(2) = 1e-46
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = +2

Query: 287 VFLDSAVQSVADGGILMCTATDLAVLCGGNGEVCYSKYGSYPLKGKY 427
           VFLDSAVQSV DGG+LMCTATD+AVLCGGNGEVCYSKYGSYPL+GKY
Sbjct: 214 VFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKY 260


>ref|XP_003544005.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 1-like [Glycine max]
          Length = 582

 Score =  116 bits (290), Expect(2) = 2e-46
 Identities = 54/63 (85%), Positives = 59/63 (93%)
 Frame = +3

Query: 3   GIGQVVALDNDKVSVEACKRNIKYNGSVACEKVESHLVDARVFMLTHPKEFDVVDLDPYG 182
           GIGQV+A+DNDK SVEAC+RNIK+NGSVA  KVESHL DARV+MLTHPKEFDVVDLDPYG
Sbjct: 166 GIGQVIAVDNDKASVEACRRNIKFNGSVAASKVESHLDDARVYMLTHPKEFDVVDLDPYG 225

Query: 183 SPS 191
           SPS
Sbjct: 226 SPS 228



 Score = 94.7 bits (234), Expect(2) = 2e-46
 Identities = 42/47 (89%), Positives = 45/47 (95%)
 Frame = +2

Query: 287 VFLDSAVQSVADGGILMCTATDLAVLCGGNGEVCYSKYGSYPLKGKY 427
           VFLDSAVQS  DGG+LMCTATD+AVLCGGNGEVCYSKYGSYPL+GKY
Sbjct: 229 VFLDSAVQSTVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKY 275


>ref|XP_002330951.1| predicted protein [Populus trichocarpa] gi|222873145|gb|EEF10276.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score =  114 bits (285), Expect(2) = 3e-46
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = +3

Query: 3   GIGQVVALDNDKVSVEACKRNIKYNGSVACEKVESHLVDARVFMLTHPKEFDVVDLDPYG 182
           GIG+VVALDNDK SVEAC++NIK+NGSVA  KVESHL DARV+MLTHPKEFD+VDLDPYG
Sbjct: 152 GIGKVVALDNDKASVEACQKNIKFNGSVAISKVESHLADARVYMLTHPKEFDMVDLDPYG 211

Query: 183 SPS 191
           SPS
Sbjct: 212 SPS 214



 Score = 96.3 bits (238), Expect(2) = 3e-46
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = +2

Query: 287 VFLDSAVQSVADGGILMCTATDLAVLCGGNGEVCYSKYGSYPLKGKY 427
           VFLDSAVQSV DGG+LMCTATD+AVLCGGNGEVCYSKYGSYPL+GKY
Sbjct: 215 VFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKY 261


Top