BLASTX nr result

ID: Coptis23_contig00017621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017621
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136569.1| PREDICTED: probable plastid-lipid-associated...   268   7e-82
ref|XP_003519042.1| PREDICTED: probable plastid-lipid-associated...   264   8e-80
ref|NP_001242119.1| uncharacterized protein LOC100779837 [Glycin...   264   1e-79
gb|ACU22825.1| unknown [Glycine max]                                  262   2e-79
gb|AFK43352.1| unknown [Medicago truncatula]                          259   1e-78

>ref|XP_004136569.1| PREDICTED: probable plastid-lipid-associated protein 13,
            chloroplastic-like [Cucumis sativus]
            gi|449525291|ref|XP_004169651.1| PREDICTED: probable
            plastid-lipid-associated protein 13, chloroplastic-like
            [Cucumis sativus]
          Length = 303

 Score =  268 bits (685), Expect(2) = 7e-82
 Identities = 145/218 (66%), Positives = 172/218 (78%), Gaps = 8/218 (3%)
 Frame = -3

Query: 1221 PPPSS----SYSVHCLVRQGG-CRKM---KVIRAMVQQQTYQGASANYAKEMERLSAKES 1066
            PP SS    S+ +H     GG CR++   ++ RAMVQQ   QGA A YAKEMERLSAKES
Sbjct: 20   PPLSSNAVPSFLLHSRFPSGGRCRRLLCRRLCRAMVQQAA-QGAPAIYAKEMERLSAKES 78

Query: 1065 LLLAFKDSGGFESLISGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGT 886
            LLLAFKDSGGFE+L++G+TTD+QRIDVNERIT LERLNPTPRPTTSPFLEGRWN EW G+
Sbjct: 79   LLLAFKDSGGFEALVTGKTTDMQRIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGS 138

Query: 885  ASPILFVIRFLFQRPPSTLVSLSGIEVALKDGYAKITANTKFLNSIESKFILTTKISVEG 706
             SP L     LFQR PSTL +LS ++  +KDG A+ITAN K LNSIESK IL+TK+SVEG
Sbjct: 139  GSPGL-AATILFQRFPSTLATLSKLDAFIKDGTARITANVKLLNSIESKVILSTKLSVEG 197

Query: 705  PLRMKEESVEGVFETPTVNEEAIPEQLKGAFVQAVGTL 592
            PLR+KEE +EG+ ETP+V+E+A+PEQLK AF Q V T+
Sbjct: 198  PLRLKEEYIEGIIETPSVSEQAVPEQLKSAFGQVVNTV 235



 Score = 63.9 bits (154), Expect(2) = 7e-82
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -2

Query: 475 GAYQRLYMISYLDEEILILRDTSGVPEVLTKLESLPDP 362
           G+YQRL MISYLDEEILI+RD SGVPEVLT+L+S P P
Sbjct: 256 GSYQRLMMISYLDEEILIIRDASGVPEVLTRLDSPPSP 293


>ref|XP_003519042.1| PREDICTED: probable plastid-lipid-associated protein 13,
            chloroplastic-like [Glycine max]
          Length = 299

 Score =  264 bits (674), Expect(2) = 8e-80
 Identities = 141/207 (68%), Positives = 163/207 (78%)
 Frame = -3

Query: 1212 SSSYSVHCLVRQGGCRKMKVIRAMVQQQTYQGASANYAKEMERLSAKESLLLAFKDSGGF 1033
            SSS ++  L R  G  K    RAMVQQ   QGA A YAKEMERLSAKESLLLAFKD+GGF
Sbjct: 28   SSSLTLSSLQR--GSNKRSGCRAMVQQAV-QGAPAAYAKEMERLSAKESLLLAFKDAGGF 84

Query: 1032 ESLISGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGTASPILFVIRFL 853
            E+L+SG+TT+ Q+IDVNERIT LERLNPTPRPTTSPFLEG+WN EW G+ SP LF  RF+
Sbjct: 85   EALVSGKTTEWQKIDVNERITGLERLNPTPRPTTSPFLEGQWNFEWFGSGSPGLFAARFI 144

Query: 852  FQRPPSTLVSLSGIEVALKDGYAKITANTKFLNSIESKFILTTKISVEGPLRMKEESVEG 673
            F+  PSTL +LS ++V +KDG AKITAN + LNSIE+K IL+TK+SVEGPLRMKEE VEG
Sbjct: 145  FEIFPSTLANLSKMDVVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEG 204

Query: 672  VFETPTVNEEAIPEQLKGAFVQAVGTL 592
            V  TPT+ EE +PEQLKGA  QA   L
Sbjct: 205  VLVTPTIIEERVPEQLKGALGQAANAL 231



 Score = 61.2 bits (147), Expect(2) = 8e-80
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = -2

Query: 475 GAYQRLYMISYLDEEILILRDTSGVPEVLTKLESLPDPEGVVEPIVE 335
           G++QRL+MISYLDEEILI+R+T+G+PEVLT+L++ P   G   P  E
Sbjct: 252 GSFQRLFMISYLDEEILIIRNTAGIPEVLTRLDAAPSSLGDSSPEYE 298


>ref|NP_001242119.1| uncharacterized protein LOC100779837 [Glycine max]
            gi|255641773|gb|ACU21156.1| unknown [Glycine max]
          Length = 310

 Score =  264 bits (674), Expect(2) = 1e-79
 Identities = 142/213 (66%), Positives = 164/213 (76%), Gaps = 6/213 (2%)
 Frame = -3

Query: 1212 SSSYSVHCL------VRQGGCRKMKVIRAMVQQQTYQGASANYAKEMERLSAKESLLLAF 1051
            SSS S +C        ++ G  K    RAMVQQ   QGA A YAKEMERLSAKESLLLAF
Sbjct: 31   SSSSSSYCSWLTLSSPQRVGSNKRWGCRAMVQQAV-QGAPAAYAKEMERLSAKESLLLAF 89

Query: 1050 KDSGGFESLISGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGTASPIL 871
            KD+GGFE+L+SG+TT+ Q+IDVNERIT LERLNPTPRPTTSPFLEGRWN EW G+ SP L
Sbjct: 90   KDAGGFEALVSGKTTEWQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGL 149

Query: 870  FVIRFLFQRPPSTLVSLSGIEVALKDGYAKITANTKFLNSIESKFILTTKISVEGPLRMK 691
            F  RF+F+  PSTL +LS ++  +KDG AKITAN + LNSIE+K IL+TK+SVEGPLRMK
Sbjct: 150  FAARFIFETFPSTLANLSKMDFVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMK 209

Query: 690  EESVEGVFETPTVNEEAIPEQLKGAFVQAVGTL 592
            EE VEGVF TPT+ EE +PEQLKGA  QA   L
Sbjct: 210  EEYVEGVFVTPTIIEERVPEQLKGALGQAANAL 242



 Score = 60.5 bits (145), Expect(2) = 1e-79
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = -2

Query: 475 GAYQRLYMISYLDEEILILRDTSGVPEVLTKLESLPDPEGVVEPIVE 335
           G++QRL+MISYLDEEILI+R+T+G+PEVLT+L++ P   G   P  E
Sbjct: 263 GSFQRLFMISYLDEEILIIRNTAGIPEVLTRLDAAPSILGDSSPEYE 309


>gb|ACU22825.1| unknown [Glycine max]
          Length = 299

 Score =  262 bits (670), Expect(2) = 2e-79
 Identities = 140/207 (67%), Positives = 162/207 (78%)
 Frame = -3

Query: 1212 SSSYSVHCLVRQGGCRKMKVIRAMVQQQTYQGASANYAKEMERLSAKESLLLAFKDSGGF 1033
            SSS ++  L R  G  K    RAMVQQ   QGA A YAKEMERLSAKESL LAFKD+GGF
Sbjct: 28   SSSLTLSSLQR--GSNKRSGCRAMVQQAV-QGAPAAYAKEMERLSAKESLFLAFKDAGGF 84

Query: 1032 ESLISGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGTASPILFVIRFL 853
            E+L+SG+TT+ Q+IDVNERIT LERLNPTPRPTTSPFLEG+WN EW G+ SP LF  RF+
Sbjct: 85   EALVSGKTTEWQKIDVNERITGLERLNPTPRPTTSPFLEGQWNFEWFGSGSPGLFAARFI 144

Query: 852  FQRPPSTLVSLSGIEVALKDGYAKITANTKFLNSIESKFILTTKISVEGPLRMKEESVEG 673
            F+  PSTL +LS ++V +KDG AKITAN + LNSIE+K IL+TK+SVEGPLRMKEE VEG
Sbjct: 145  FEIFPSTLANLSKMDVVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEG 204

Query: 672  VFETPTVNEEAIPEQLKGAFVQAVGTL 592
            V  TPT+ EE +PEQLKGA  QA   L
Sbjct: 205  VLVTPTIIEERVPEQLKGALGQAANAL 231



 Score = 61.2 bits (147), Expect(2) = 2e-79
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = -2

Query: 475 GAYQRLYMISYLDEEILILRDTSGVPEVLTKLESLPDPEGVVEPIVE 335
           G++QRL+MISYLDEEILI+R+T+G+PEVLT+L++ P   G   P  E
Sbjct: 252 GSFQRLFMISYLDEEILIIRNTAGIPEVLTRLDAAPSSLGDSSPEYE 298


>gb|AFK43352.1| unknown [Medicago truncatula]
          Length = 297

 Score =  259 bits (663), Expect(2) = 1e-78
 Identities = 138/209 (66%), Positives = 163/209 (77%)
 Frame = -3

Query: 1218 PPSSSYSVHCLVRQGGCRKMKVIRAMVQQQTYQGASANYAKEMERLSAKESLLLAFKDSG 1039
            P SSS+ V     +   +K  V +AMVQ QT  GA A YAKEMERLSAKESLLLAFKD+G
Sbjct: 25   PSSSSWKVS--TSRITWQKRGVCKAMVQVQT--GAPAAYAKEMERLSAKESLLLAFKDAG 80

Query: 1038 GFESLISGETTDIQRIDVNERITSLERLNPTPRPTTSPFLEGRWNCEWLGTASPILFVIR 859
            GFE L+SG+TT+ QRIDVNERIT LERLNPTPRPTTSPFLEGRWN EW G  SP LF  R
Sbjct: 81   GFEGLVSGKTTEYQRIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGPGSPGLFAAR 140

Query: 858  FLFQRPPSTLVSLSGIEVALKDGYAKITANTKFLNSIESKFILTTKISVEGPLRMKEESV 679
             +F+  PS+L +LS ++V +KDG AKITANT FLNS+ES+ IL+TK++VEGPLRMKEE V
Sbjct: 141  MIFENFPSSLANLSKMDVFIKDGNAKITANTLFLNSVESRIILSTKLTVEGPLRMKEEYV 200

Query: 678  EGVFETPTVNEEAIPEQLKGAFVQAVGTL 592
            EG+  +PTV E+ +P+QLKGA  QAV  L
Sbjct: 201  EGIIVSPTVLEDRVPDQLKGALGQAVNVL 229



 Score = 61.2 bits (147), Expect(2) = 1e-78
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = -2

Query: 475 GAYQRLYMISYLDEEILILRDTSGVPEVLTKLESLPDPEGVVEPIVE 335
           G++QRL+MISYLDEEILI+R+T+G+PEVLT+L++ P   G   P  E
Sbjct: 250 GSFQRLFMISYLDEEILIIRNTAGIPEVLTRLDASPSSLGESSPEYE 296


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