BLASTX nr result

ID: Coptis23_contig00017617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017617
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794...    60   4e-07
ref|XP_003608726.1| hypothetical protein MTR_4g101070 [Medicago ...    58   1e-06
ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814...    57   2e-06
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]    56   5e-06
emb|CBI31915.3| unnamed protein product [Vitis vinifera]               55   9e-06

>ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794740 [Glycine max]
          Length = 760

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +1

Query: 10  DRLKLCYVYASTADPQFALVVRPEIVSVTLICLACSAVALQASFRSLILK-QFEFCQGIS 186
           D+L   ++ A T+ PQF L       +    CL  +   ++A  RS ++   F+FC G +
Sbjct: 211 DQLMKIWMMAHTSSPQFVLGRSVTGTASGAFCLLSTLTLVEAMLRSYLMPWSFDFCTGDT 270

Query: 187 DYDWSMLVIVINQILTVIVGTSAIAFR 267
           DY WS+++I+I Q+  V+VGT A AFR
Sbjct: 271 DYKWSIILILIVQVAAVVVGTIAPAFR 297


>ref|XP_003608726.1| hypothetical protein MTR_4g101070 [Medicago truncatula]
           gi|355509781|gb|AES90923.1| hypothetical protein
           MTR_4g101070 [Medicago truncatula]
          Length = 752

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
 Frame = +1

Query: 10  DRLKLCYVYASTADPQFALVVRPEIVSVTLICLACSAVALQASFRSLILK-QFEFCQGIS 186
           D L   ++ A T+ PQF L       +    C+  +   L+A  RS ++    +FC G S
Sbjct: 207 DELMKFWMMAHTSGPQFLLGRSVSCTASGAFCVLSTLTLLEAMLRSYLMSWSVKFCAGES 266

Query: 187 DYDWSMLVIVINQILTVIVGTSAIAFRCLAMVPH 288
           DY WS+++I+I Q+  V VGT A AFR  A V +
Sbjct: 267 DYKWSIILILIVQVAAVGVGTIAPAFRWFAAVKY 300


>ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814359 [Glycine max]
          Length = 759

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +1

Query: 10  DRLKLCYVYASTADPQFALVVRPEIVSVTLICLACSAVALQASFRSLILKQ-FEFCQGIS 186
           D L   ++   T+ PQF L       +    CL  +   ++A  RS ++   F+FC G  
Sbjct: 211 DHLMKIWMMTHTSSPQFVLGRSVTCTASGAFCLLSTLTLIEAMLRSYLMPWLFDFCTGDC 270

Query: 187 DYDWSMLVIVINQILTVIVGTSAIAFR 267
           DY WS ++I+I Q+  V+VGT A AFR
Sbjct: 271 DYKWSTILILIVQVAAVVVGTIAPAFR 297


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +1

Query: 28  YVYASTADPQFALVVRPEIVSVTLICLACSAVALQASFRSLILK-QFEFCQGISDYDWSM 204
           ++ A ++ PQF +       +   +CL  +A+ ++A  RS ++   F+FC G SDY WS+
Sbjct: 215 WIMAHSSXPQFVIGRSVTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSV 274

Query: 205 LVIVINQILTVIVGTSAIAFR 267
            +I+I+Q + V VGT   AFR
Sbjct: 275 TLILISQTVAVGVGTIGPAFR 295


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +1

Query: 28  YVYASTADPQFALVVRPEIVSVTLICLACSAVALQASFRSLILK-QFEFCQGISDYDWSM 204
           ++ A ++ PQF +       +   +CL  +A+ ++A  RS ++   F+FC G SDY WS+
Sbjct: 215 WIMAHSSCPQFVIGRSVTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSV 274

Query: 205 LVIVINQILTVIVGTSAIAFR 267
            +I+I+Q + V VGT   AFR
Sbjct: 275 TLILISQTVAVGVGTIGPAFR 295


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