BLASTX nr result

ID: Coptis23_contig00017611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017611
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273667.1| PREDICTED: exocyst complex component 8 [Viti...   145   3e-33
ref|XP_002315387.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|XP_002310947.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|XP_003529713.1| PREDICTED: uncharacterized protein LOC100820...   142   3e-32
ref|XP_003604146.1| hypothetical protein MTR_4g005930 [Medicago ...   140   1e-31

>ref|XP_002273667.1| PREDICTED: exocyst complex component 8 [Vitis vinifera]
          Length = 769

 Score =  145 bits (367), Expect = 3e-33
 Identities = 76/109 (69%), Positives = 81/109 (74%)
 Frame = +2

Query: 2   LRAAAECVQIALGNCSLLESRGLALCPVLLKLFRPCVEQALDANLKRIEESSXXXXXXDD 181
           LRAAAECVQIALG+CSLLE+RGLALCPVLLKLFRP VEQALDANLKRIEES+      DD
Sbjct: 333 LRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIEESTAALAAADD 392

Query: 182 WVLTYPPFXXXXXXXXXXXXLGSVIVSQPKLSSSAHRFNNMAQEFFEDV 328
           WVLTYPP             LG+      KLSSSAHRFN M Q+FFEDV
Sbjct: 393 WVLTYPPTGTRQSGRPSSMSLGNTTAFHHKLSSSAHRFNLMVQDFFEDV 441


>ref|XP_002315387.1| predicted protein [Populus trichocarpa] gi|222864427|gb|EEF01558.1|
           predicted protein [Populus trichocarpa]
          Length = 779

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/109 (67%), Positives = 83/109 (76%)
 Frame = +2

Query: 2   LRAAAECVQIALGNCSLLESRGLALCPVLLKLFRPCVEQALDANLKRIEESSXXXXXXDD 181
           LRAAAECVQIALG+CSLLE+RGLALCPVL+KLFRP VEQAL+AN+KRIEES+      DD
Sbjct: 333 LRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALNANIKRIEESTAALAAADD 392

Query: 182 WVLTYPPFXXXXXXXXXXXXLGSVIVSQPKLSSSAHRFNNMAQEFFEDV 328
           WVLTYPP             LG+  V Q KL+SSAHRFN M Q+FFEDV
Sbjct: 393 WVLTYPPTSTRQSGRSSVTSLGNAAVFQHKLTSSAHRFNLMVQDFFEDV 441


>ref|XP_002310947.1| predicted protein [Populus trichocarpa] gi|222850767|gb|EEE88314.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  144 bits (364), Expect = 6e-33
 Identities = 75/109 (68%), Positives = 82/109 (75%)
 Frame = +2

Query: 2   LRAAAECVQIALGNCSLLESRGLALCPVLLKLFRPCVEQALDANLKRIEESSXXXXXXDD 181
           LRAAAECVQIALG+CSLLE+RGLALCPVLLKLFRP VEQAL+ANLKRIEES+      DD
Sbjct: 332 LRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALNANLKRIEESTAALAAADD 391

Query: 182 WVLTYPPFXXXXXXXXXXXXLGSVIVSQPKLSSSAHRFNNMAQEFFEDV 328
           WVLTYPP             LG+    Q KL+SSAHRFN M Q+FFEDV
Sbjct: 392 WVLTYPPTSTRQSGRSSVTSLGNAAAFQHKLTSSAHRFNLMVQDFFEDV 440


>ref|XP_003529713.1| PREDICTED: uncharacterized protein LOC100820599 [Glycine max]
          Length = 769

 Score =  142 bits (358), Expect = 3e-32
 Identities = 73/109 (66%), Positives = 81/109 (74%)
 Frame = +2

Query: 2   LRAAAECVQIALGNCSLLESRGLALCPVLLKLFRPCVEQALDANLKRIEESSXXXXXXDD 181
           LRAAAECVQIALG+CSLLE+RGLALCPVLLKLFRP VEQALDANLKRI+ES+      DD
Sbjct: 333 LRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIQESTAALAAADD 392

Query: 182 WVLTYPPFXXXXXXXXXXXXLGSVIVSQPKLSSSAHRFNNMAQEFFEDV 328
           WVLTYPP             + +    Q KL+SSAHRFN M Q+FFEDV
Sbjct: 393 WVLTYPPTSNRQTSRPSSISISNTTAFQHKLTSSAHRFNLMVQDFFEDV 441


>ref|XP_003604146.1| hypothetical protein MTR_4g005930 [Medicago truncatula]
           gi|355505201|gb|AES86343.1| hypothetical protein
           MTR_4g005930 [Medicago truncatula]
          Length = 737

 Score =  140 bits (353), Expect = 1e-31
 Identities = 75/109 (68%), Positives = 81/109 (74%)
 Frame = +2

Query: 2   LRAAAECVQIALGNCSLLESRGLALCPVLLKLFRPCVEQALDANLKRIEESSXXXXXXDD 181
           LRAAAECVQIALG+CSLLE+RGLALCPVLLKLFRP VEQALDANLKRI+ES+      DD
Sbjct: 309 LRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIQESTAAMAAADD 368

Query: 182 WVLTYPPFXXXXXXXXXXXXLGSVIVSQPKLSSSAHRFNNMAQEFFEDV 328
           WVLTYPP              GS    Q KL+SSAHRFN M Q+FFEDV
Sbjct: 369 WVLTYPP--------NVNRQTGSTTAFQLKLTSSAHRFNLMVQDFFEDV 409


Top